BQ622954

Overview
NameBQ622954
Unique NameBQ622954
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length532
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C71AJ_ARATH (Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=CYP71A19 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 7.397e-12
Identity = 33/84 (39.29%), Postives = 52/84 (61.90%), Query Frame = 3
Query:    6 FIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLD----NHNMDMEDKFGLTVQKAEPLHAVP 245
            F PER L S  DF+GQ+F+ IPFG+G+RICPG+     ++ + L +++  F+W++D        D+ +  GL V +  PL A+P
Sbjct:  404 FRPERHLDSILDFQGQDFKFIPFGSGKRICPGIGFTSALIGVTLANIVKRFNWRMDVEPQRVQHDLTEATGLVVFRKFPLIAIP 487          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C71A1_PERAE (Cytochrome P450 71A1 OS=Persea americana GN=CYP71A1 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 7.397e-12
Identity = 29/55 (52.73%), Postives = 42/55 (76.36%), Query Frame = 3
Query:    6 FIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL 170
            F+PERF+ ++ DFKGQ+F+LIPFGAGRR CPG+   I  + + L +L+  F+W+L
Sbjct:  414 FLPERFVNNSVDFKGQDFQLIPFGAGRRGCPGIAFGISSVEISLANLLYWFNWEL 468          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C78A4_PINRA (Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 9.661e-12
Identity = 34/86 (39.53%), Postives = 50/86 (58.14%), Query Frame = 3
Query:    6 FIPERFL----GSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDW-KLDNHNMDMEDKFGLTVQKAEPLHAVPV 248
            F PERF+    G   D +G +  L PFGAGRR+CPG  L +  ++L +  L++ F+W     H +D+ +   L+ + A PLH VPV
Sbjct:  458 FRPERFVVFEGGEEVDVRGNDLRLAPFGAGRRVCPGKALGLATVNLWVAKLLHHFEWLPHAEHPVDLSEVLKLSCEMARPLHCVPV 543          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C71BT_ARATH (Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=CYP71B29 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 9.661e-12
Identity = 30/55 (54.55%), Postives = 41/55 (74.55%), Query Frame = 3
Query:    6 FIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL 170
            F P+RFL S+ D+KG NFEL+PFG+GRRICPG+ + I ++   L +L+  FDW L
Sbjct:  411 FNPDRFLDSSIDYKGLNFELLPFGSGRRICPGMTMGITLVEFALLNLLYFFDWGL 465          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C71C2_MAIZE (Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.262e-11
Identity = 34/86 (39.53%), Postives = 52/86 (60.47%), Query Frame = 3
Query:    6 FIPERFLGS----NADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL--DNHNMDMEDKFGLTVQKAEPLHAVP 245
            F+PERF+      +   KG++   IPFG+GRRICPG+      + +ML +L+  FDW++      + ME+ FGLT+++ E L  VP
Sbjct:  447 FMPERFVQEPGAVDVHMKGKDLRFIPFGSGRRICPGMNFGFATMEVMLANLMYHFDWEVPGSGAGVSMEESFGLTLRRKEKLLLVP 532          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C71A4_SOLME (Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71A4 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.262e-11
Identity = 34/83 (40.96%), Postives = 50/83 (60.24%), Query Frame = 3
Query:    6 FIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAEPLHAV 242
            F PERFL ++ D KG  FEL+PFG+GRR CPG   AI ++ L L  L++ F++ L       ++DM +  G+  ++  PL  V
Sbjct:  419 FCPERFLNNDIDMKGLKFELLPFGSGRRGCPGSSFAIAVIELALARLVHKFNFALPKGTKPEDLDMTECTGIATRRKSPLPVV 501          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C99A3_ORYSJ (Cytochrome P450 99A3 OS=Oryza sativa subsp. japonica GN=CYP99A3 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.648e-11
Identity = 37/83 (44.58%), Postives = 47/83 (56.63%), Query Frame = 3
Query:    6 FIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAEPLHAV 242
            FIPERF    ADFKG  FE +PFG GRR CPG   A+  L L++  L+  FDW L +     ++DME   G T ++   L  V
Sbjct:  409 FIPERFEDGTADFKGSRFEYLPFGTGRRRCPGDIFAMATLELIVARLLYYFDWSLPDGMQPGDIDMELVVGATARRKNHLQLV 491          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C99A1_SORBI (Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bicolor GN=CYP99A1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.648e-11
Identity = 38/91 (41.76%), Postives = 52/91 (57.14%), Query Frame = 3
Query:    6 FIPERFL---GSNA----DFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKLDN----HNMDMEDKFGLTVQKAEPLHAVP 245
            F PERF    GS+A    D++G  FE IPFG+GRR+CPG    +  L LM+  L+  FDW L +      +DM+   G T+++   LH VP
Sbjct:  417 FRPERFADDDGSSAAVAVDYRGSQFEYIPFGSGRRMCPGNTFGLAALELMVARLLYYFDWSLPDGMRPEELDMDTVVGSTMRRRNHLHLVP 507          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C71BS_ARATH (Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=CYP71B28 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.648e-11
Identity = 30/55 (54.55%), Postives = 42/55 (76.36%), Query Frame = 3
Query:    6 FIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWKL 170
            F P+RFL S+ D++G NFEL+PFG+GRRICPG+ + I ++ L L +L+  FDW L
Sbjct:  411 FNPDRFLDSSIDYRGLNFELLPFGSGRRICPGMTMGIAIVELGLLNLLYFFDWGL 465          
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.152e-11
Identity = 34/83 (40.96%), Postives = 46/83 (55.42%), Query Frame = 3
Query:    6 FIPERFLGSNADFKGQNFELIPFGAGRRICPGLPLAIRMLHLMLGSLINSFDWK----LDNHNMDMEDKFGLTVQKAEPLHAV 242
            F PERFL  + D KG +F L+PFGAGRR+CPG  L I ++  M+  L++ F W          +DM +  GL      P+ AV
Sbjct:  409 FRPERFLEEDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMMSHLLHHFVWTPPQGTKPEEIDMSENPGLVTYMRTPVQAV 491          
The following BLAST results are available for this feature:
BLAST of BQ622954 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 104
Match NameE-valueIdentityDescription
C71AJ_ARATH7.397e-1239.29Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=C... [more]
C71A1_PERAE7.397e-1252.73Cytochrome P450 71A1 OS=Persea americana GN=CYP71A... [more]
C78A4_PINRA9.661e-1239.53Cytochrome P450 78A4 OS=Pinus radiata GN=CYP78A4 P... [more]
C71BT_ARATH9.661e-1254.55Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=C... [more]
C71C2_MAIZE1.262e-1139.53Cytochrome P450 71C2 OS=Zea mays GN=CYP71C2 PE=2 S... [more]
C71A4_SOLME1.262e-1140.96Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71... [more]
C99A3_ORYSJ1.648e-1144.58Cytochrome P450 99A3 OS=Oryza sativa subsp. japoni... [more]
C99A1_SORBI1.648e-1141.76Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bico... [more]
C71BS_ARATH1.648e-1154.55Cytochrome P450 71B28 OS=Arabidopsis thaliana GN=C... [more]
C98A3_ARATH2.152e-1140.96Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00045 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00045 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622954 ID=BQ622954; Name=BQ622954; organism=Citrus sinensis; type=EST; length=532bp
ACACTTTTATTCCCGAAAGGTTCTTAGGGTCAAATGCTGATTTCAAAGGC
CAGAATTTTGAGCTAATTCCCTTCGGAGCTGGACGACGAATTTGTCCTGG
TTTACCATTGGCAATCAGAATGTTACATCTAATGTTGGGTTCACTTATTA
ACTCTTTTGATTGGAAGCTTGATAACCACAACATGGACATGGAAGATAAA
TTTGGCCTCACCGTACAAAAGGCTGAACCCCTTCATGCTGTCCCTGTTGC
CATCTAGTTCTATACTATAGTTCGTAGCCAATATATAAAGCGCTTGGTGG
TAGCCACTATATAAAGCGCTTGGTGGTTAGTTATATGTGTGTAATCATTC
TTAAGTGCGGGCGCTTTCATTTTTTTTTTATGTAGACACGTAACTTAACA
GAGTTAATCTTTAATAAACTATAAAGTCATGCGATTTAATAGCATTGAAA
GCTGACTCTATTAAATTGCACGGCTTAAAAGTTTGTTCACATGAAAAAAA
ATGAGAGTTCCCCCACTATATTATCTCTTATA
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