BQ622964

Overview
NameBQ622964
Unique NameBQ622964
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length552
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2846 contig Csv1_Contig2846:69..620. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ622964 vs. ExPASy Swiss-Prot
Match: LEP_STAAW (Signal peptidase IB OS=Staphylococcus aureus (strain MW2) GN=spsB PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 5.445e-16
Identity = 52/171 (30.41%), Postives = 79/171 (46.20%), Query Frame = 1
Query:   25 ALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILEPLAYEMDPV------------------VVPEGYVFVLGDNRNNSFDSHNWGPLPIENIVGRSVFRYWP 483
            A  + F+   F+  P +I   SM+PTL  G+R+    + Y     E  ++V+F A         +  D ++KR++   GD VE     L VNG  QDE ++   L ++                      V+P+G   VLGDNR  S DS  +G +  + IVG+  FR+WP
Sbjct:   15 AFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIIGYKTGGLEKGNVVVFHA---------NKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGTFQVKDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWP 176          
BLAST of BQ622964 vs. ExPASy Swiss-Prot
Match: LEP_STAAU (Signal peptidase IB OS=Staphylococcus aureus GN=spsB PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 5.445e-16
Identity = 52/171 (30.41%), Postives = 79/171 (46.20%), Query Frame = 1
Query:   25 ALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILEPLAYEMDPV------------------VVPEGYVFVLGDNRNNSFDSHNWGPLPIENIVGRSVFRYWP 483
            A  + F+   F+  P +I   SM+PTL  G+R+    + Y     E  ++V+F A         +  D ++KR++   GD VE     L VNG  QDE ++   L ++                      V+P+G   VLGDNR  S DS  +G +  + IVG+  FR+WP
Sbjct:   15 AFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIIGYKTGGLEKGNVVVFHA---------NKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGTFQVKDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWP 176          
BLAST of BQ622964 vs. ExPASy Swiss-Prot
Match: LEP_STAAS (Signal peptidase IB OS=Staphylococcus aureus (strain MSSA476) GN=spsB PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 5.445e-16
Identity = 52/171 (30.41%), Postives = 79/171 (46.20%), Query Frame = 1
Query:   25 ALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILEPLAYEMDPV------------------VVPEGYVFVLGDNRNNSFDSHNWGPLPIENIVGRSVFRYWP 483
            A  + F+   F+  P +I   SM+PTL  G+R+    + Y     E  ++V+F A         +  D ++KR++   GD VE     L VNG  QDE ++   L ++                      V+P+G   VLGDNR  S DS  +G +  + IVG+  FR+WP
Sbjct:   15 AFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIIGYKTGGLEKGNVVVFHA---------NKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGTFQVKDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWP 176          
BLAST of BQ622964 vs. ExPASy Swiss-Prot
Match: LEP_STAAR (Signal peptidase IB OS=Staphylococcus aureus (strain MRSA252) GN=spsB PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 5.445e-16
Identity = 52/171 (30.41%), Postives = 79/171 (46.20%), Query Frame = 1
Query:   25 ALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILEPLAYEMDPV------------------VVPEGYVFVLGDNRNNSFDSHNWGPLPIENIVGRSVFRYWP 483
            A  + F+   F+  P +I   SM+PTL  G+R+    + Y     E  ++V+F A         +  D ++KR++   GD VE     L VNG  QDE ++   L ++                      V+P+G   VLGDNR  S DS  +G +  + IVG+  FR+WP
Sbjct:   15 AFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIIGYKTGGLEKGNVVVFHA---------NKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGTFQVKDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWP 176          
BLAST of BQ622964 vs. ExPASy Swiss-Prot
Match: LEP_STAAN (Signal peptidase IB OS=Staphylococcus aureus (strain N315) GN=spsB PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 5.445e-16
Identity = 52/171 (30.41%), Postives = 79/171 (46.20%), Query Frame = 1
Query:   25 ALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILEPLAYEMDPV------------------VVPEGYVFVLGDNRNNSFDSHNWGPLPIENIVGRSVFRYWP 483
            A  + F+   F+  P +I   SM+PTL  G+R+    + Y     E  ++V+F A         +  D ++KR++   GD VE     L VNG  QDE ++   L ++                      V+P+G   VLGDNR  S DS  +G +  + IVG+  FR+WP
Sbjct:   15 AFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIIGYKTGGLEKGNVVVFHA---------NKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGTFQVKDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWP 176          
BLAST of BQ622964 vs. ExPASy Swiss-Prot
Match: LEP_STAAM (Signal peptidase IB OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=spsB PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 5.445e-16
Identity = 52/171 (30.41%), Postives = 79/171 (46.20%), Query Frame = 1
Query:   25 ALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILEPLAYEMDPV------------------VVPEGYVFVLGDNRNNSFDSHNWGPLPIENIVGRSVFRYWP 483
            A  + F+   F+  P +I   SM+PTL  G+R+    + Y     E  ++V+F A         +  D ++KR++   GD VE     L VNG  QDE ++   L ++                      V+P+G   VLGDNR  S DS  +G +  + IVG+  FR+WP
Sbjct:   15 AFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIIGYKTGGLEKGNVVVFHA---------NKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGTFQVKDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWP 176          
BLAST of BQ622964 vs. ExPASy Swiss-Prot
Match: LEP_PSEAE (Signal peptidase I OS=Pseudomonas aeruginosa GN=lepB PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 5.445e-16
Identity = 68/219 (31.05%), Postives = 102/219 (46.58%), Query Frame = 1
Query:   10 KAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFK------------RPEVSDIVIFRAPPILQEIGFSSGDV-FIKRIVATAGDCVEVHGGK-LLVNG------------------------VAQDEDFILEPLA-YEMDP---VVVPEGYVFVLGDNRNNSFDSHNW----------GPLPIENIVGR--SVFRYWPPSRVSDM 504
            K+ F  L +  + +SFL EP  IPS SM PTL+VGD IL  K +Y  +             P+  D+++FR P        S  ++ +IKR+V   GD V     K L VNG                        + Q E  I + ++ Y ++P     +P G+ F++GDNR+NS DS  W          G +P  NIVG+  +V+  WP  ++S++
Sbjct:   64 KSFFPVLFIVLVLRSFLVEPFQIPSGSMKPTLEVGDFILVNKFAYGIRLPVLDTKVIPIGDPQRGDVMVFRYP--------SEPNINYIKRVVGLPGDTVRYTKEKRLYVNGELVAEKLVGEEPGTLGSVTLYQEKLGQAEHLIRKEMSRYRIEPDRQWTIPAGHYFMMGDNRDNSNDSRYWNDPKIPKDLLGMVPDRNIVGKAFAVWMSWPDPKMSNL 274          
BLAST of BQ622964 vs. ExPASy Swiss-Prot
Match: LEP2_BACAM (Signal peptidase I OS=Bacillus amyloliquefaciens GN=sipS2 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.584e-15
Identity = 58/169 (34.32%), Postives = 82/169 (48.52%), Query Frame = 1
Query:   10 KAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILE----------PLAYEMDPVVVPEGYVFVLGDNRNNSFDSHNWGPLPIEN-IVGRSVFRYWP 483
            KA   A+ ++ L + FL EP  +  +SM PTL  G+R+   K   +    E  DIVI          G +S   ++KR++   G+ VE+    L +NG    E ++             L  +  PV VP+G  FV+GDNR NS DS N   L  EN IVG S F ++P
Sbjct:   25 KAIIIAVALALLIRHFLFEPYLVEGSSMYPTLHDGERLFVNKSVNYIGEIERGDIVIIN--------GDTSKVHYVKRLIGKPGETVEMKNDTLYINGKKIAEPYLASNKKEAKKLGVNLTGDFGPVKVPKGKYFVMGDNRLNSMDSRNGLGLIAENRIVGTSKFVFFP 185          
BLAST of BQ622964 vs. ExPASy Swiss-Prot
Match: LEP_BACLI (Signal peptidase I OS=Bacillus licheniformis GN=lepB PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 7.863e-15
Identity = 53/169 (31.36%), Postives = 80/169 (47.34%), Query Frame = 1
Query:   10 KAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILE----------PLAYEMDPVVVPEGYVFVLGDNRNNSFDSHN-WGPLPIENIVGRSVFRYWP 483
            KA   A+ ++ L ++FL EP  +   SM+PTL  G+R+   K   +    +  DIVI          G      ++KR++   GD V++    L +NG    E ++ E           L  +  PV VPEG  FV+GDNR  S DS N  G +  + + G S F ++P
Sbjct:   18 KAIIIAVVLALLIRAFLFEPYLVEGTSMDPTLHDGERLFVYKTVRYVGEFKRGDIVIID--------GDEKNVHYVKRLIGLPGDTVQMKDDTLYINGKKVSEPYLSENRKEAEAVGVKLTGDFGPVKVPEGKYFVMGDNRQRSMDSRNGLGLIDKKRVAGTSQFVFFP 178          
BLAST of BQ622964 vs. ExPASy Swiss-Prot
Match: LEPT_BACSU (Signal peptidase I T OS=Bacillus subtilis GN=sipT PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.341e-14
Identity = 54/169 (31.95%), Postives = 83/169 (49.11%), Query Frame = 1
Query:   10 KAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILE----------PLAYEMDPVVVPEGYVFVLGDNRNNSFDSHN-WGPLPIENIVGRSVFRYWP 483
            KA   A+ ++ L + FL EP  +  +SM PTL  G+R+   K   +    +  DIVI          G +S   ++KR++   G+ V++    L +NG    E ++ +           L  +  PV VP+G  FV+GDNR NS DS N  G +  + IVG S F ++P
Sbjct:   25 KAIVIAVLLALLIRHFLFEPYLVEGSSMYPTLHDGERLFVNKTVNYIGELKRGDIVIIN--------GETSKIHYVKRLIGKPGETVQMKDDTLYINGKKVAEPYLSKNKKEAEKLGVSLTGDFGPVKVPKGKYFVMGDNRLNSMDSRNGLGLIAEDRIVGTSKFVFFP 185          
The following BLAST results are available for this feature:
BLAST of BQ622964 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
LEP_STAAW5.445e-1630.41Signal peptidase IB OS=Staphylococcus aureus (stra... [more]
LEP_STAAU5.445e-1630.41Signal peptidase IB OS=Staphylococcus aureus GN=sp... [more]
LEP_STAAS5.445e-1630.41Signal peptidase IB OS=Staphylococcus aureus (stra... [more]
LEP_STAAR5.445e-1630.41Signal peptidase IB OS=Staphylococcus aureus (stra... [more]
LEP_STAAN5.445e-1630.41Signal peptidase IB OS=Staphylococcus aureus (stra... [more]
LEP_STAAM5.445e-1630.41Signal peptidase IB OS=Staphylococcus aureus (stra... [more]
LEP_PSEAE5.445e-1631.05Signal peptidase I OS=Pseudomonas aeruginosa GN=le... [more]
LEP2_BACAM1.584e-1534.32Signal peptidase I OS=Bacillus amyloliquefaciens G... [more]
LEP_BACLI7.863e-1531.36Signal peptidase I OS=Bacillus licheniformis GN=le... [more]
LEPT_BACSU1.341e-1431.95Signal peptidase I T OS=Bacillus subtilis GN=sipT ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00055 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00055 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622964 ID=BQ622964; Name=BQ622964; organism=Citrus sinensis; type=EST; length=552bp
GATGATGCCAAGGCCGCCTTTACGGCTTTGACTGTTAGTTTCTTGTTCAA
GTCGTTTTTGGCTGAGCCCAGATCCATTCCATCGGCTTCTATGAACCCTA
CCCTGGATGTTGGTGACCGGATTTTGGCAGAGAAGGTTTCATACTTTTTC
AAAAGGCCTGAGGTATCTGATATAGTGATCTTTAGGGCACCTCCGATCTT
GCAGGAAATTGGTTTCAGTTCTGGTGATGTATTCATAAAAAGGATAGTGG
CAACGGCTGGAGATTGTGTCGAAGTTCATGGTGGGAAACTGCTTGTAAAT
GGTGTTGCTCAAGATGAAGATTTCATTCTGGAGCCACTAGCTTATGAAAT
GGACCCAGTGGTTGTGCCTGAAGGTTATGTATTTGTATTGGGAGACAATC
GTAATAACAGCTTTGATTCTCATAACTGGGGTCCGCTTCCTATTGAGAAC
ATCGTTGGTAGGTCTGTGTTTCGTTATTGGCCTCCGTCCAGAGTATCCGA
CATGTTAGATGATCCTTATGCAATGAAGAATGCTGCTGTGCCAATCGCGT
GA
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