BQ622972
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Match: TBG_RETFI (Tubulin gamma chain OS=Reticulomyxa filosa PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 7.708e-17 Identity = 45/144 (31.25%), Postives = 84/144 (58.33%), Query Frame = 3 Query: 6 YGKKSKLGFTVYPSPQVSTSVV-EPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAP-VISAEKAYHEQLSVAEITNSAFEPSSMM 431 Y KK ++V+P+ +SVV PYNSVL+ L+ + D V++DN +++ I L ++ ++ N ++S V+++ T +LR+ G +N D+ +LVP PR HF+++S+ P VI + ++ SV ++ +P ++M Sbjct: 160 YPKKIIQTYSVFPNDSERSSVVVHPYNSVLALKRLILNADAVVVIDNTSLHRIADERLQLDFASFKETNSIISTVMAASTTTLRYPGYMNNDLVGLIASLVPTPRAHFLMTSFTPLVIKGAQRRIQKTSVLDVMRRLLQPKNIM 303
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Match: TBG_PLAFO (Tubulin gamma chain OS=Plasmodium falciparum (isolate NF54) GN=G-TUB PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.243e-16 Identity = 41/118 (34.75%), Postives = 73/118 (61.86%), Query Frame = 3 Query: 3 DYGKKSKLGFTVYP--SPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPV 350 +Y KK F+V+P + + S VV+PYNS+L+ L+ TD V++DN ++ I L + PT+ N ++S V+S+ T +LR+ G++N D+ ++L+ P+ HF+++SY P+ Sbjct: 160 NYSKKMIQTFSVFPLLTNESSDVVVQPYNSILTLKRLILSTDSVVVIDNTSLNRIFVERLKLNNPTFQQTNTIISNVMSASTTTLRYPGSMNNDMISLISSLIINPKCHFLITSYTPI 277
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Match: TBG_ANEPH (Tubulin gamma chain OS=Anemia phyllitidis GN=TUBG PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.825e-16 Identity = 46/123 (37.40%), Postives = 72/123 (58.54%), Query Frame = 3 Query: 6 YGKKSKLGFTVYPSP-QVSTSVVEPYNSVLSTHSLLE-HTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKA 368 Y KK ++V+P+ + S VV+PYNS+L+ + L + D V+LDN A+ I L I PT+ N LVS V+S+ T +LR+ G +N D+ +L+P PR HF+++ Y P+ +A Sbjct: 161 YSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLNKRLTINADCVVVLDNTALNRIAVDRLHIPNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLVASLIPTPRCHFLMTGYTPLTVERQA 283
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Match: TBG_NEUCR (Tubulin gamma chain OS=Neurospora crassa GN=tub-4 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 6.525e-16 Identity = 41/115 (35.65%), Postives = 69/115 (60.00%), Query Frame = 3 Query: 6 YGKKSKLGFTVYP-SPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAP 347 + KK ++V+P + VV PYNS+L+ L ++ D V+LDN A+ I L ++ P++ N+LVS V+S+ T +LR+ G ++ D+ +L+P PR HF+++SY P Sbjct: 161 FPKKIIQTYSVFPDTTSAGDVVVHPYNSLLAMRRLTQNADSVVVLDNGALSHIAADRLHVQEPSFQQTNQLVSTVMSASTTTLRYPGYMHNDLVSILASLIPTPRCHFLMTSYTP 275
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Match: TBG_ASHGO (Tubulin gamma chain OS=Ashbya gossypii GN=TUB4 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 8.522e-16 Identity = 42/117 (35.90%), Postives = 71/117 (60.68%), Query Frame = 3 Query: 6 YGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVIS 356 Y KK ++V+PS + S VV+PYN++L+ L++++D +VL DN+A+ ++ R L +Y N+L++ V+SS+T SLRF + + + LVP P +HF+ S+ P S Sbjct: 163 YHKKIVSTYSVFPSRE-SEVVVQPYNTILTLRRLIDNSDASVLFDNDALLNLTARVLRDSNTSYQQTNQLIASVMSSVTNSLRFPSYMYNSLPSIFSTLVPTPELHFLAPSFTPFTS 278
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Match: TBG1_EUPCR (Tubulin gamma-1 chain OS=Euplotes crassus PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 8.522e-16 Identity = 46/145 (31.72%), Postives = 82/145 (56.55%), Query Frame = 3 Query: 6 YGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAP--VISAEKAYHEQLSVAEITNSAFEPSSMMA 434 Y KK ++V+P+ + VV+PYN +LS L+ + D V+LDN A+ I L + +PT+ +N +VS V+++ T +LR+ G +N D+ +LVP PR HF+++ Y P +I + + +V ++ + ++MA Sbjct: 161 YPKKLIQTYSVFPNE--NDVVVQPYNCLLSMKRLILNADCVVVLDNTALTSIAVDRLKLLQPTFPQINSIVSTVMAASTTTLRYPGYMNNDLVGLIASLVPTPRCHFLMTGYTPLSLIDQKVTSVRKTTVLDVMRRLLQTKNIMA 303
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Match: TBG_EUPAE (Tubulin gamma chain OS=Euplotes aediculatus PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.454e-15 Identity = 44/120 (36.67%), Postives = 71/120 (59.17%), Query Frame = 3 Query: 6 YGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEK 365 Y KK ++V+P + VV+PYN +LS L + D V+LDN A+ I L I +PT++ +N +VS V+++ T +LR+ G +N D+ +LVP PR HF+++ Y P+ +K Sbjct: 161 YPKKLIQTYSVFPIE--NDVVVQPYNCLLSIKRLTLNADCVVVLDNNALTSIAVDRLKILQPTFSQINSIVSTVMAASTTTLRYPGYMNNDMVGLIASLVPTPRCHFLMTGYTPLSLDQK 278
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Match: TBG2_EUPOC (Tubulin gamma-2 chain OS=Euplotes octocarinatus PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.454e-15 Identity = 44/120 (36.67%), Postives = 71/120 (59.17%), Query Frame = 3 Query: 6 YGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEK 365 Y KK ++V+P + VV+PYN +LS L + D V+LDN A+ I L I +PT++ +N +VS V+++ T +LR+ G +N D+ +LVP PR HF+++ Y P+ +K Sbjct: 161 YPKKLIQTYSVFPIE--NDVVVQPYNCLLSIKRLTLNADCVVVLDNNALTSIAVDRLKILQPTFSQINSIVSTVMAASTTTLRYPGYMNNDMVGLIASLVPTPRCHFLMTGYTPLSLDQK 278
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Match: TBG2_EUPCR (Tubulin gamma-2 chain OS=Euplotes crassus PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.454e-15 Identity = 43/115 (37.39%), Postives = 69/115 (60.00%), Query Frame = 3 Query: 6 YGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPV 350 Y KK ++V+P+ + VV+PYN +LS L+ + D V+LDN AI I L + PT + +N +VS V+++ T +LR+ G +N D+ +LVP PR HF+++ Y P+ Sbjct: 161 YPKKLVQTYSVFPND--NDIVVQPYNCILSMKRLVLNADCVVVLDNTAITSIAVDRLKLLHPTISQVNSIVSTVMAASTTTLRYPGYMNNDLVGLIASLVPTPRCHFLMTGYTPL 273
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Match: TBG1_EUPOC (Tubulin gamma-1 chain OS=Euplotes octocarinatus PE=2 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 1.454e-15 Identity = 44/120 (36.67%), Postives = 71/120 (59.17%), Query Frame = 3 Query: 6 YGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEK 365 Y KK ++V+P + VV+PYN +LS L + D V+LDN A+ I L I +PT++ +N +VS V+++ T +LR+ G +N D+ +LVP PR HF+++ Y P+ +K Sbjct: 161 YPKKLIQTYSVFPIE--NDVVVQPYNCLLSIKRLTLNADCVVVLDNNALTSIAVDRLKILQPTFSQINSIVSTVMAASTTTLRYPGYMNNDMVGLIASLVPTPRCHFLMTGYTPLSLDQK 278 The following BLAST results are available for this feature:
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 418
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ622972 ID=BQ622972; Name=BQ622972; organism=Citrus sinensis; type=EST; length=434bpback to top |