BQ622972
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Match: TBG_COCHE (Tubulin gamma chain (Fragment) OS=Cochliobolus heterostrophus GN=TUB4 PE=3 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 3.238e-15 Identity = 41/112 (36.61%), Postives = 67/112 (59.82%), Query Frame = 3 Query: 6 YGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSY 341 + KK ++V+P+ Q VV+PYNS+LS L ++ D V+LDN A+ I L + P++ N+LVS V+S+ T +LR+ + D+ +L+P PR HF+++SY Sbjct: 96 FPKKLIQTYSVFPNTQDGDIVVQPYNSLLSMRRLTQNADSVVVLDNGALTRIAADRLHVMTPSFEQTNQLVSTVMSASTTTLRYPAYSHNDLVGIVASLIPTPRCHFLMTSY 207
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Match: TBG_ENCCU (Tubulin gamma chain OS=Encephalitozoon cuniculi GN=TUB4 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.676e-14 Identity = 40/121 (33.06%), Postives = 72/121 (59.50%), Query Frame = 3 Query: 3 DYGKKSKLGFTVYPSPQVSTSVV-EPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAE 362 ++ KK ++++P+ S+ VV +PYNSVL+ H L+E++D V++DN ++ SL I PT+ ++N L+S V+++ T+++RF G + LVP + F++ SY P + E Sbjct: 153 EFPKKIVQTYSIFPNNDESSDVVVQPYNSVLTLHRLIENSDCIVVMDNSSLGRYTLDSLRIGTPTFDHINLLISTVMAASTSTIRFPGYMYCTHQSINNCLVPLDPLKFVVPSYTPFVCDE 273
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Match: TBG_CANGA (Tubulin gamma chain OS=Candida glabrata GN=TUB4 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.676e-14 Identity = 38/114 (33.33%), Postives = 64/114 (56.14%), Query Frame = 3 Query: 6 YGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAP 347 Y K ++V+PS Q S VV PYN+VL+ L E D +++ DN A+ ++ R+ +Y + N+L+S +SS+T SLRF + + + L+P P +HF+ ++ P Sbjct: 163 YSKSFITTYSVFPSKQ-SEVVVGPYNTVLTLRRLCEDADASIIFDNNALLNLTARTFRDPNTSYEHTNQLISSALSSITNSLRFPSYMYNSMASIFSTLIPTPELHFLTPNFTP 275
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Match: TBE_MOUSE (Tubulin epsilon chain OS=Mus musculus GN=Tube1 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.676e-14 Identity = 40/132 (30.30%), Postives = 72/132 (54.55%), Query Frame = 3 Query: 36 VYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDI---------------------------ERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPV 350 VYPS + + PYNS+L+ L EH D + +DN++++DI + +D+ + + +N +V+ ++ SLT+S RF+G+LN+D+ E NLVP+P++H+++SS P+ Sbjct: 177 VYPSSEDDV-ITSPYNSMLAMKELNEHADCVLPIDNQSLFDIISK-IDLVVNSGKLGSAVKPKSLITSNMGAVKKHHKKPFDAMNNIVANLLLSLTSSARFEGSLNMDLNEISMNLVPFPKLHYLVSSLTPL 306
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Match: TBE_HUMAN (Tubulin epsilon chain OS=Homo sapiens GN=TUBE1 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.042e-13 Identity = 38/133 (28.57%), Postives = 73/133 (54.89%), Query Frame = 3 Query: 33 TVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDI---------------------------ERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPV 350 ++YPS + + PYNS+L+ L EH D + +DN++++DI + +D+ + + +N +V+ ++ +LT+S RF+G+LN+D+ E NLVP+P++H+++SS P+ Sbjct: 176 SIYPSGEDDV-ITSPYNSILAMKELNEHADCVLPIDNQSLFDIISK-IDLMVNSGKLGTTVKPKSLVTSSSGALKKQHKKPFDAMNNIVANLLLNLTSSARFEGSLNMDLNEISMNLVPFPQLHYLVSSLTPL 306
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Match: TBG_YEAST (Tubulin gamma chain OS=Saccharomyces cerevisiae GN=TUB4 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.377e-12 Identity = 40/145 (27.59%), Postives = 77/145 (53.10%), Query Frame = 3 Query: 6 YGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVIS---AEKAYHEQLSVAEITNSAFEPSSMM 431 Y KK ++V+P+ + S VV+ YN++L+ L+E +D V+ DN ++ +I + + N+L+S +ISS+T S+RF + ++ + L+P P +HF+ S+ P S + H+ S ++ +PS+ + Sbjct: 162 YPKKILTTYSVFPA-RSSEVVVQSYNTILALRRLIEDSDATVVFDNASLLNISGKVFRNPNIDLQHTNQLISTIISSVTNSIRFPSYMYSSMSSIYSTLIPSPELHFLSPSFTPFTSDYIHDDIAHKGHSSYDVMLDLLDPSNSL 305
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Match: TBG_ENTHI (Tubulin gamma chain OS=Entamoeba histolytica PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 9.751e-12 Identity = 35/123 (28.46%), Postives = 62/123 (50.41%), Query Frame = 3 Query: 66 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMA 434 VV PYNS+L+ L+ V+ DN A+ DI ++ T ++N ++S +S+ TA+LRF L + +L P HF+++SY P+ + + S ++ +P ++MA Sbjct: 177 VVSPYNSILTLRRLITECQSVVVFDNSALADITHTQFGVDEATVFDMNSIISSSMSAFTANLRFPSTLYNSLNSLMIHLCPSRFSHFLMTSYTPLRQVNQ-ISSRTSAIDVMKRLIQPQNIMA 298
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Match: TBA_POPEU (Tubulin alpha chain (Fragments) OS=Populus euphratica PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.837e-11 Identity = 35/50 (70.00%), Postives = 36/50 (72.00%), Query Frame = 3 Query: 168 RSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPR 317 RSLDIERPTYTNLNR FDGA+NVDVTEFQTNLVPYPR Sbjct: 15 RSLDIERPTYTNLNR--------------FDGAINVDVTEFQTNLVPYPR 50 The following BLAST results are available for this feature:
BLAST of BQ622972 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 418
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ622972 ID=BQ622972; Name=BQ622972; organism=Citrus sinensis; type=EST; length=434bpback to top |