BQ622974

Overview
NameBQ622974
Unique NameBQ622974
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length644
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ622974 vs. ExPASy Swiss-Prot
Match: ANX1_ARATH (Receptor-like protein kinase ANXUR1 OS=Arabidopsis thaliana GN=ANX1 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.938e-25
Identity = 62/166 (37.35%), Postives = 99/166 (59.64%), Query Frame = 2
Query:   68 ALEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLLDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKTLTAKLSGYNI 565
            +L EI+  T NFD +N+IG G  G++YKG +   ++V+VK                +ELLS+LRH+HLVS++G+C        + G  + LV ++++ G+L ++L +  KK  L W +R+ I IGA RG+ +LHTG    I   ++KT NIL+D+   AK+S + +
Sbjct:  506 SLPEIKHGTQNFDDSNVIGVGGFGKVYKGVIDGTTKVAVKKSNPNSEQGLNEFETEIELLSRLRHKHLVSLIGYC--------DEGGEMCLVYDYMAFGTLREHLYN-TKKPQLTWKRRLEIAIGAARGLHYLHTGAKYTIIHRDVKTTNILVDENWVAKVSDFGL 662          
BLAST of BQ622974 vs. ExPASy Swiss-Prot
Match: HERK_ARATH (Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana GN=HERK1 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 8.772e-25
Identity = 63/171 (36.84%), Postives = 101/171 (59.06%), Query Frame = 2
Query:   80 IEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLLDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKTLTAKLSGYNIPLPSKKGLE 592
            +++ATNNFD +  IG G  G++YKG L DG++V+VK    K +         +E+LS+ RHRHLVS++G+C        +  + + L+ E++ NG++  +L        L W QR+ I IGA RG+ +LHTG +  +   ++K+ NILLD+   AK++ + +   SK G E
Sbjct:  478 VKDATNNFDESRNIGVGGFGKVYKGELNDGTKVAVKRGNPKSQQGLAEFRTEIEMLSQFRHRHLVSLIGYC--------DENNEMILIYEYMENGTVKSHLYG-SGLPSLTWKQRLEICIGAARGLHYLHTGDSKPVIHRDVKSANILLDENFMAKVADFGL---SKTGPE 636          
BLAST of BQ622974 vs. ExPASy Swiss-Prot
Match: Y5241_ARATH (Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana GN=At5g24010 PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.146e-24
Identity = 62/174 (35.63%), Postives = 97/174 (55.75%), Query Frame = 2
Query:   44 GFHHFAVSALEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLLDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKTLTAKLSGYNI 565
            G+H   +S   E++  TNNFD + +IG G  G +++G L D ++V+VK      R      +  + +LSK+RHRHLVS++G+C           S + LV E++  G L  +L        L W QR+ + IGA RG+ +LHTG + GI   ++K+ NILLD    AK++ + +
Sbjct:  471 GYHTLRIS-FAELQSGTNNFDRSLVIGVGGFGMVFRGSLKDNTKVAVKRGSPGSRQGLPEFLSEITILSKIRHRHLVSLVGYC--------EEQSEMILVYEYMDKGPLKSHLYG-STNPPLSWKQRLEVCIGAARGLHYLHTGSSQGIIHRDIKSTNILLDNNYVAKVADFGL 634          
BLAST of BQ622974 vs. ExPASy Swiss-Prot
Match: Y5389_ARATH (Probable receptor-like protein kinase At5g38990 OS=Arabidopsis thaliana GN=At5g38990 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 5.686e-24
Identity = 64/169 (37.87%), Postives = 100/169 (59.17%), Query Frame = 2
Query:   68 ALEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSR-VSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLLDYL--TDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKTLTAKLSGYNI 565
            ++ EI+ ATN+F+   +IG G  G +YKG +  G+  V+VK L++      +     +E+LSKLRH HLVS++G+C        +  + + LV E++ +G+L D+L   D      L W +R+ I IGA RG+Q+LHTG    I   ++KT NILLD+   AK+S + +
Sbjct:  514 SIYEIKSATNDFEEKLIIGVGGFGSVYKGRIDGGATLVAVKRLEITSNQGAKEFDTELEMLSKLRHVHLVSLIGYC--------DDDNEMVLVYEYMPHGTLKDHLFRRDKASDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVAKVSDFGL 674          
BLAST of BQ622974 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 1.267e-23
Identity = 59/166 (35.54%), Postives = 96/166 (57.83%), Query Frame = 2
Query:   71 LEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLLDYL-TDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKTLTAKLSGYNI 565
            L E+E ATN     N+IGEG  G +Y+G LTDG++V+VK L   +    +     VE++ ++RH++LV +LG+C+         G+   LV + + NG+L  ++  D      L W  RM II+G  +G+ +LH G+ P +   ++K+ NILLD+   AK+S + +
Sbjct:  144 LRELEAATNGLCEENVIGEGGYGIVYRGILTDGTKVAVKNLLNNRGQAEKEFKVEVEVIGRVRHKNLVRLLGYCV--------EGAYRMLVYDFVDNGNLEQWIHGDVGDVSPLTWDIRMNIILGMAKGLAYLHEGLEPKVVHRDIKSSNILLDRQWNAKVSDFGL 301          
BLAST of BQ622974 vs. ExPASy Swiss-Prot
Match: WAKLS_ARATH (Putative wall-associated receptor kinase-like 16 OS=Arabidopsis thaliana GN=WAKL16 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.267e-23
Identity = 59/168 (35.12%), Postives = 95/168 (56.55%), Query Frame = 2
Query:   56 FAVSALEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLLDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKTLTAKLSGY 559
            F +   E+++EATN +D + ++G+G Q  +YKG L D S V++K  +L   +  +  +  V +LS++ HR++V +LG C+ T            LV E I+ GSL D+L        L W  R+ I I     + +LH+G +  I   ++KTENILLD+ LTAK++ +
Sbjct:   93 FKIFTEEDMKEATNGYDVSRILGQGGQWTVYKGILPDNSIVAIKKTRLGDNNQVEQFINEVLVLSQINHRNVVKLLGCCLET--------EVPLLVYEFITGGSLFDHLHGSMFVSSLTWEHRLEIAIEVAGAIAYLHSGASIPIIHRDIKTENILLDENLTAKVADF 252          
BLAST of BQ622974 vs. ExPASy Swiss-Prot
Match: RKF3_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.267e-23
Identity = 60/174 (34.48%), Postives = 98/174 (56.32%), Query Frame = 2
Query:   68 ALEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLLDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKTLTAKLSGYNIPLPSKKGL 589
            + +EI++ATNNF   N+IG G  G ++KG L DG++V+ K  K        +    VE+++ +RH +L+++ G+C  T    P  G    +V + +SNGSL D+L     +  L WP R  I +G  RG+ +LH G  P I   ++K  NILLD+   AK++ + +   + +G+
Sbjct:  272 SFDEIKKATNNFSRHNIIGRGGYGNVFKGALPDGTQVAFKRFKNCSAGGDANFAHEVEVIASIRHVNLLALRGYCTAT---TPYEGHQRIIVCDLVSNGSLHDHLFG-DLEAQLAWPLRQRIALGMARGLAYLHYGAQPSIIHRDIKASNILLDERFEAKVADFGLAKFNPEGM 441          
BLAST of BQ622974 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.654e-23
Identity = 63/166 (37.95%), Postives = 97/166 (58.43%), Query Frame = 2
Query:   77 EIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSR-VSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLLDYL--TDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKTLTAKLSGYNI 565
            EI+ ATN+F+   +IG G  G +YKG +  G+  V+VK L++      +     +E+LSKLRH HLVS++G+C        +  + + LV E++ +G+L D+L   D      L W +R+ I IGA RG+Q+LHTG    I   ++KT NILLD+    K+S + +
Sbjct:  510 EIKSATNDFEDKLIIGVGGFGSVYKGQIDGGATLVAVKRLEITSNQGAKEFETELEMLSKLRHVHLVSLIGYC--------DEDNEMVLVYEYMPHGTLKDHLFRRDKTSDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVTKVSDFGL 667          
BLAST of BQ622974 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 2.161e-23
Identity = 64/189 (33.86%), Postives = 104/189 (55.03%), Query Frame = 2
Query:   77 EIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLLDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKTLTAKLSGYNI----PLPSKKGLESPLRGQYVSHQPG 631
            E+  AT+NF+ +  IG+G  G++YKG L  G+ V++K  +       +  +  +ELLS+L HR+LVS+LG C        +      LV E++ NG+L D ++  K K+ L +  R+ I +G+ +G+ +LHT   P IF  ++K  NILLD   TAK++ + +    P+P  +G+        V   PG
Sbjct:  617 ELALATDNFNSSTQIGQGGYGKVYKGTLGSGTVVAIKRAQEGSLQGEKEFLTEIELLSRLHHRNLVSLLGFC--------DEEGEQMLVYEYMENGTLRDNIS-VKLKEPLDFAMRLRIALGSAKGILYLHTEANPPIFHRDIKASNILLDSRFTAKVADFGLSRLAPVPDMEGISPQHVSTVVKGTPG 796          
BLAST of BQ622974 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.822e-23
Identity = 62/165 (37.58%), Postives = 93/165 (56.36%), Query Frame = 2
Query:   71 LEEIEEATNNFDPTNLIGEGSQGQLYKGFLTDGSRVSVKCLKLKQRHLPQSLMQHVELLSKLRHRHLVSILGHCILTYQDHPNTGSTVFLVLEHISNGSLLDYLTDWKKKDMLKWPQRMAIIIGATRGVQFLHTGVAPGIFGNNLKTENILLDKTLTAKLSGYNI 565
            L EI  AT NFD    IG G  G++Y+G L DG+ +++K      +         + +LS+LRHRHLVS++G C     +H    + + LV E+++NG+L  +L        L W QR+   IG+ RG+ +LHTG   GI   ++KT NILLD+   AK+S + +
Sbjct:  510 LAEIRAATKNFDDGLAIGVGGFGKVYRGELEDGTLIAIKRATPHSQQGLAEFETEIVMLSRLRHRHLVSLIGFC----DEH----NEMILVYEYMANGTLRSHLFG-SNLPPLSWKQRLEACIGSARGLHYLHTGSERGIIHRDVKTTNILLDENFVAKMSDFGL 665          
The following BLAST results are available for this feature:
BLAST of BQ622974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 234
Match NameE-valueIdentityDescription
ANX1_ARATH3.938e-2537.35Receptor-like protein kinase ANXUR1 OS=Arabidopsis... [more]
HERK_ARATH8.772e-2536.84Receptor-like protein kinase HERK 1 OS=Arabidopsis... [more]
Y5241_ARATH1.146e-2435.63Probable receptor-like protein kinase At5g24010 OS... [more]
Y5389_ARATH5.686e-2437.87Probable receptor-like protein kinase At5g38990 OS... [more]
Y1154_ARATH1.267e-2335.54Probable serine/threonine-protein kinase At1g01540... [more]
WAKLS_ARATH1.267e-2335.12Putative wall-associated receptor kinase-like 16 O... [more]
RKF3_ARATH1.267e-2334.48Probable LRR receptor-like serine/threonine-protei... [more]
Y5900_ARATH1.654e-2337.95Putative receptor-like protein kinase At5g39000 OS... [more]
Y1684_ARATH2.161e-2333.86Probable LRR receptor-like serine/threonine-protei... [more]
Y1357_ARATH2.822e-2337.58Probable receptor-like protein kinase At1g30570 OS... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00065 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00065 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622974 ID=BQ622974; Name=BQ622974; organism=Citrus sinensis; type=EST; length=644bp
GATTCAAGGCGCGTGCCTCAGACAATGAGATATGCAGCAATAGGGCTTCC
ACCATTTCGCGGTTTCAGCCTTGGAGGAAATTGAAGAGGCAACAAACAAC
TTTGACCCAACAAATTTGATAGGTGAAGGATCTCAAGGACAGCTGTATAA
AGGCTTCCTCACAGATGGTTCAAGAGTCTCGGTGAAATGCCTGAAACTAA
AGCAGAGGCATCTGCCACAAAGCTTAATGCAGCACGTGGAATTATTATCA
AAGCTCAGGCATCGGCATCTGGTCAGCATTCTTGGACATTGCATACTTAC
TTATCAGGATCATCCCAACACCGGAAGCACCGTATTCCTTGTGCTTGAAC
ACATTTCTAATGGATCATTACTGGACTACCTTACTGACTGGAAAAAGAAG
GACATGCTGAAATGGCCACAGAGAATGGCAATTATTATTGGTGCCACAAG
GGGAGTTCAATTCTTGCACACAGGAGTTGCACCAGGCATTTTCGGTAACA
ACTTGAAGACTGAGAACATTTTGTTGGATAAGACTCTCACAGCCAAACTC
AGCGGGTATAACATTCCCTTGCCATCTAAAAAAGGATTGGAAAGCCCTCT
CAGGGGACAATATGTCTCCCATCAACCTGGAGACGGGGCGAAGG
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