BQ622975

Overview
NameBQ622975
Unique NameBQ622975
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length469
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10242 contig Csv1_Contig10242:588..1056. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ622975 vs. ExPASy Swiss-Prot
Match: AQP1_MOUSE (Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3)

HSP 1 Score: 99.3673 bits (246), Expect = 8.396e-21
Identity = 52/108 (48.15%), Postives = 64/108 (59.26%), Query Frame = 1
Query:   16 HGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 339
            HG   G GLG EIIGT  LV  V + TD +R          APL IG +V L HL  I  TG GINPARS G+A++    R + +HWIFWVGPF+G  LA L +  ++
Sbjct:  131 HGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGS----APLAIGLSVALGHLLAIDYTGCGINPARSFGSAVL---TRNFSNHWIFWVGPFIGGALAVLIYDFIL 231          
BLAST of BQ622975 vs. ExPASy Swiss-Prot
Match: AQP1_SHEEP (Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3)

HSP 1 Score: 98.5969 bits (244), Expect = 1.432e-20
Identity = 54/107 (50.47%), Postives = 66/107 (61.68%), Query Frame = 1
Query:   19 GYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 339
            G   G GLG EIIGT  LV  V + TD +R  RD  +    PL IGF+V L HL  I  TG GINPARS G+++I      + DHWIFWVGPF+GA LA L +  ++
Sbjct:  134 GVNSGQGLGIEIIGTLQLVLCVLATTDRRRR-RD--LGDSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVI---THNFQDHWIFWVGPFIGAALAVLIYDFIL 234          
BLAST of BQ622975 vs. ExPASy Swiss-Prot
Match: AQP1_PIG (Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3)

HSP 1 Score: 98.5969 bits (244), Expect = 1.432e-20
Identity = 52/107 (48.60%), Postives = 63/107 (58.88%), Query Frame = 1
Query:   19 GYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 339
            G   G GLG EIIGT  LV  V + TD +R          APL IGF+V L HL  I  TG GINPARS G+A+I      + DHW+FWVGPF+G  LA L +  ++
Sbjct:  134 GVDSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGS----APLAIGFSVALGHLLAIDYTGCGINPARSFGSAVI---THNFQDHWVFWVGPFIGGALAVLIYDFIL 233          
BLAST of BQ622975 vs. ExPASy Swiss-Prot
Match: AQP1_BOVIN (Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3)

HSP 1 Score: 98.2117 bits (243), Expect = 1.870e-20
Identity = 52/107 (48.60%), Postives = 63/107 (58.88%), Query Frame = 1
Query:   19 GYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 339
            G   G GLG EIIGT  LV  V + TD +R           PL IGF+V L HL  I  TG GINPARS G+++I      + DHWIFWVGPF+GA LA L +  ++
Sbjct:  134 GVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGS----GPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVI---THNFQDHWIFWVGPFIGAALAVLIYDFIL 233          
BLAST of BQ622975 vs. ExPASy Swiss-Prot
Match: AQP1_RAT (Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4)

HSP 1 Score: 96.6709 bits (239), Expect = 5.442e-20
Identity = 51/107 (47.66%), Postives = 64/107 (59.81%), Query Frame = 1
Query:   19 GYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 339
            G   G GLG EIIGT  LV  V + TD +R          APL IG +V L HL  I  TG GINPARS G+A++    R + +HWIFWVGPF+G+ LA L +  ++
Sbjct:  132 GVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGS----APLAIGLSVALGHLLAIDYTGCGINPARSFGSAVL---TRNFSNHWIFWVGPFIGSALAVLIYDFIL 231          
BLAST of BQ622975 vs. ExPASy Swiss-Prot
Match: AQP1_PONAB (Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3)

HSP 1 Score: 95.1301 bits (235), Expect = 1.583e-19
Identity = 51/107 (47.66%), Postives = 62/107 (57.94%), Query Frame = 1
Query:   19 GYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 339
            G   G GLG EIIGT  LV  V + TD +R          APL IG +V L HL  I  TG GINPARS G+A+I      + +HWIFWVGPF+G  LA L +  ++
Sbjct:  132 GVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGS----APLAIGLSVALGHLLAIDYTGCGINPARSFGSAVI---THNFSNHWIFWVGPFIGGALAVLIYDFIL 231          
BLAST of BQ622975 vs. ExPASy Swiss-Prot
Match: AQP1_HUMAN (Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3)

HSP 1 Score: 95.1301 bits (235), Expect = 1.583e-19
Identity = 51/107 (47.66%), Postives = 62/107 (57.94%), Query Frame = 1
Query:   19 GYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 339
            G   G GLG EIIGT  LV  V + TD +R          APL IG +V L HL  I  TG GINPARS G+A+I      + +HWIFWVGPF+G  LA L +  ++
Sbjct:  132 GVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGS----APLAIGLSVALGHLLAIDYTGCGINPARSFGSAVI---THNFSNHWIFWVGPFIGGALAVLIYDFIL 231          
BLAST of BQ622975 vs. ExPASy Swiss-Prot
Match: AQP1_CANFA (Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3)

HSP 1 Score: 93.9745 bits (232), Expect = 3.527e-19
Identity = 50/107 (46.73%), Postives = 61/107 (57.01%), Query Frame = 1
Query:   19 GYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 339
            G   G GLG EIIGT  LV  V + TD +R           PL IG +V L HL  I  TG GINPARS G+++I      + DHWIFWVGPF+G  LA L +  ++
Sbjct:  134 GVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGS----GPLAIGLSVALGHLLAIDYTGCGINPARSFGSSVI---THNFKDHWIFWVGPFIGGALAVLIYDFIL 233          
BLAST of BQ622975 vs. ExPASy Swiss-Prot
Match: AQP4_HUMAN (Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 5.094e-18
Identity = 52/116 (44.83%), Postives = 69/116 (59.48%), Query Frame = 1
Query:   16 HG-YTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLA-ALYHQVVIRAIPFK 357
            HG  T G GL  E+I TF LV+T+F++ D+KR+     +     L IGF+V + HL  I  TG  +NPARS G A+I      W++HWI+WVGP +GA LA  LY  V    + FK
Sbjct:  151 HGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVGPIIGAVLAGGLYEYVFCPDVEFK 259          
BLAST of BQ622975 vs. ExPASy Swiss-Prot
Match: AQP4_RAT (Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 6.652e-18
Identity = 53/116 (45.69%), Postives = 69/116 (59.48%), Query Frame = 1
Query:   16 HG-YTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLA-ALYHQVVIRAIPFK 357
            HG  T G GL  E+I TF LV+T+F++ D+KR+     V     L IGF+V + HL  I  TG  +NPARS G A+I      W++HWI+WVGP +GA LA ALY  V    +  K
Sbjct:  151 HGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSVA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLAGALYEYVFCPDVELK 259          
The following BLAST results are available for this feature:
BLAST of BQ622975 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 135
Match NameE-valueIdentityDescription
AQP1_MOUSE8.396e-2148.15Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3[more]
AQP1_SHEEP1.432e-2050.47Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3[more]
AQP1_PIG1.432e-2048.60Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3[more]
AQP1_BOVIN1.870e-2048.60Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3[more]
AQP1_RAT5.442e-2047.66Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4[more]
AQP1_PONAB1.583e-1947.66Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3[more]
AQP1_HUMAN1.583e-1947.66Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3[more]
AQP1_CANFA3.527e-1946.73Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3[more]
AQP4_HUMAN5.094e-1844.83Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2[more]
AQP4_RAT6.652e-1845.69Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00066 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00066 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622975 ID=BQ622975; Name=BQ622975; organism=Citrus sinensis; type=EST; length=469bp
CCAACGTCGTAGCCTCATGGCTACACCAAGGGTGATGGTCTTGGTGCCGA
GATTATTGGTACTTTTGTTCTTGTCTACACAGTTTTCTCTGCCACTGATG
CCAAACGGAGCGCCAGGGACTCTCATGTTCCTATTTTGGCTCCTCTGCCA
ATTGGGTTCGCTGTGTTTTTGGTTCACTTGGCCACTATCCCAATTACCGG
AACTGGCATCAACCCAGCGAGGAGTCTTGGAGCTGCAATCATCTACAACA
AGGACCGCGGTTGGGATGACCACTGGATTTTCTGGGTGGGACCATTCGTT
GGAGCTGGACTCGCAGCTTTGTACCACCAAGTCGTGATCAGAGCCATTCC
CTTCAAATGAAGCTGATCGCTTCATCAACGTTCGTGATTGCACCTGCATT
TGTTTATGGCTGTTGCTGGTTTGCTTATGTGTATTATAAAATATTAATTA
GTCCTTTGTTCAAATCTGC
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