BQ622975

Overview
NameBQ622975
Unique NameBQ622975
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length469
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10242 contig Csv1_Contig10242:588..1056. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ622975 vs. ExPASy Swiss-Prot
Match: AQP2_RAT (Aquaporin-2 OS=Rattus norvegicus GN=Aqp2 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 9.941e-14
Identity = 41/105 (39.05%), Postives = 59/105 (56.19%), Query Frame = 1
Query:   25 TKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 339
            T G  +  E+  T  LV  +F++TD +R            L IGF+V L HL  I  TG  +NPARSL  A++  K   +DDHW+FW+GP VGA + +L +  ++
Sbjct:  126 TAGQAVTVELFLTMQLVLCIFASTDERRGDNLGS----PALSIGFSVTLGHLLGIYFTGCSMNPARSLAPAVVTGK---FDDHWVFWIGPLVGAIIGSLLYNYLL 223          
BLAST of BQ622975 vs. ExPASy Swiss-Prot
Match: TIP21_ORYSJ (Probable aquaporin TIP2-1 OS=Oryza sativa subsp. japonica GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.696e-13
Identity = 44/110 (40.00%), Postives = 64/110 (58.18%), Query Frame = 1
Query:    1 PTS*PHGYTKGDGLGAEIIGTFVLVYTVFS-ATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYH 327
            PT    G ++ +G+  EI+ TF LVYTV++ A D K+ +  +    +AP+ IGF V    LA  P +G  +NPARS G A+      G   +W++WVGP +G GLA L +
Sbjct:  129 PTHGVAGISELEGVVMEIVITFALVYTVYATAADPKKGSLGT----IAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGNFAG---NWVYWVGPLIGGGLAGLVY 231          
BLAST of BQ622975 vs. ExPASy Swiss-Prot
Match: TIP32_MAIZE (Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.215e-13
Identity = 42/116 (36.21%), Postives = 63/116 (54.31%), Query Frame = 1
Query:   13 PHGYTKGDGLG------AEIIGTFVLVYTVFSAT-DAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVVI 339
            P G+    G+G       E + TF  VY  ++   D KR     H+  +APL +GF +    LA  P  G G+NPAR  G A++  +   W  HW++W+GPF+GAGLA L ++ ++
Sbjct:  139 PPGFALASGVGDGHAVLLEAVMTFGFVYAYYATVVDPKRG----HLGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPALVGWR---WRHHWVYWLGPFLGAGLAGLVYEYLL 247          
BLAST of BQ622975 vs. ExPASy Swiss-Prot
Match: AQPZ_CHRVO (Aquaporin Z OS=Chromobacterium violaceum GN=aqpZ PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.215e-13
Identity = 40/110 (36.36%), Postives = 59/110 (53.64%), Query Frame = 1
Query:   13 PHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGW--DDHWIFWVGPFVGAGLAALYHQVV 336
            P GY+    L  E++ T   +  +  ATD +  A        APL IG A+ L+HL +IP+T T +NPARS G A+      GW     W+FW+ P +GA L A  ++++
Sbjct:  124 PGGYSLLAALVCEVVMTMFFLLVIMGATDKRAPAG------FAPLAIGLALTLIHLISIPVTNTSVNPARSTGVALFVG---GWAVQQLWLFWLAPIIGAVLGAKVYRLI 224          
BLAST of BQ622975 vs. ExPASy Swiss-Prot
Match: TIP21_MAIZE (Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.892e-13
Identity = 44/110 (40.00%), Postives = 64/110 (58.18%), Query Frame = 1
Query:    1 PTS*PHGYTKGDGLGAEIIGTFVLVYTVFS-ATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYH 327
            PT    G ++ +G+  E++ TF LVYTV++ A D K+ +  +    +AP+ IGF V    LA  P +G  +NPARS G A+      G   +W++WVGP VG GLA L +
Sbjct:  129 PTHAVAGISELEGVVFEVVITFALVYTVYATAADPKKGSLGT----IAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAGDFAG---NWVYWVGPLVGGGLAGLVY 231          
BLAST of BQ622975 vs. ExPASy Swiss-Prot
Match: AQPZ_BORPA (Aquaporin Z OS=Bordetella parapertussis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.892e-13
Identity = 41/110 (37.27%), Postives = 61/110 (55.45%), Query Frame = 1
Query:   13 PHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGW--DDHWIFWVGPFVGAGLAALYHQVV 336
            P  Y+    L  EI+ +   V+ +  ATD +  A        AP+PIG A+ L+HL +IP+T T +NPARS G A+      GW  +  W+FW+ P  GA + AL +++V
Sbjct:  129 PGKYSMQAALICEIVLSAGFVFVILGATDKRAPAG------FAPIPIGLALTLIHLISIPVTNTSVNPARSTGPALFVG---GWALEQLWLFWLAPIAGALVGALAYRLV 229          
BLAST of BQ622975 vs. ExPASy Swiss-Prot
Match: AQPZ_BORBR (Aquaporin Z OS=Bordetella bronchiseptica GN=aqpZ PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.892e-13
Identity = 41/110 (37.27%), Postives = 61/110 (55.45%), Query Frame = 1
Query:   13 PHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGW--DDHWIFWVGPFVGAGLAALYHQVV 336
            P  Y+    L  EI+ +   V+ +  ATD +  A        AP+PIG A+ L+HL +IP+T T +NPARS G A+      GW  +  W+FW+ P  GA + AL +++V
Sbjct:  129 PGKYSMQAALICEIVLSAGFVFVILGATDKRAPAG------FAPIPIGLALTLIHLISIPVTNTSVNPARSTGPALFVG---GWALEQLWLFWLAPIAGALVGALAYRLV 229          
BLAST of BQ622975 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 3.777e-13
Identity = 43/99 (43.43%), Postives = 58/99 (58.59%), Query Frame = 1
Query:   34 DGLGAEIIGTFVLVYTVFS-ATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYH 327
            +G+  EII TF LVYTV++ A D K+ +  +    +APL IG  V    LA  P +G  +NPARS G A+      G   HW++WVGP +G GLA L +
Sbjct:  141 EGVVMEIIITFALVYTVYATAADPKKGSLGT----IAPLAIGLIVGANILAAGPFSGGSMNPARSFGPAVAAGDFSG---HWVYWVGPLIGGGLAGLIY 232          
BLAST of BQ622975 vs. ExPASy Swiss-Prot
Match: TIP22_MAIZE (Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 4.933e-13
Identity = 43/104 (41.35%), Postives = 62/104 (59.62%), Query Frame = 1
Query:   19 GYTKGDGLGAEIIGTFVLVYTVFS-ATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYH 327
            G T+ +G+  EI+ TF LVYTV++ A D K+ +  +    +AP+ IGF V    LA  P +G  +NPARS G A+      G   +W++WVGP +G GLA L +
Sbjct:  136 GTTELEGVVFEIVITFALVYTVYATAADPKKGSLGT----IAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVAAADFAG---NWVYWVGPLIGGGLAGLVY 232          
BLAST of BQ622975 vs. ExPASy Swiss-Prot
Match: AQPZ_VIBVU (Aquaporin Z OS=Vibrio vulnificus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 4.933e-13
Identity = 38/108 (35.19%), Postives = 59/108 (54.63%), Query Frame = 1
Query:   13 PHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRGWDDHWIFWVGPFVGAGLAALYHQVV 336
            P GY+    L  E++ T + +  +  ATD +           AP+ IG  + L+HL +IP+T T +NPARS G A +Y  D      W+FWV P +GA L A+ ++++
Sbjct:  125 PGGYSLTSALVTEVVMTMMFLLVILGATDQRAPQG------FAPIAIGLCLTLIHLISIPVTNTSVNPARSTGVA-LYVGDWATAQLWLFWVAPILGALLGAVAYKLI 225          
The following BLAST results are available for this feature:
BLAST of BQ622975 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 135
Match NameE-valueIdentityDescription
AQP2_RAT9.941e-1439.05Aquaporin-2 OS=Rattus norvegicus GN=Aqp2 PE=1 SV=1[more]
TIP21_ORYSJ1.696e-1340.00Probable aquaporin TIP2-1 OS=Oryza sativa subsp. j... [more]
TIP32_MAIZE2.215e-1336.21Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1[more]
AQPZ_CHRVO2.215e-1336.36Aquaporin Z OS=Chromobacterium violaceum GN=aqpZ P... [more]
TIP21_MAIZE2.892e-1340.00Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1[more]
AQPZ_BORPA2.892e-1337.27Aquaporin Z OS=Bordetella parapertussis GN=aqpZ PE... [more]
AQPZ_BORBR2.892e-1337.27Aquaporin Z OS=Bordetella bronchiseptica GN=aqpZ P... [more]
TIP21_ARATH3.777e-1343.43Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1... [more]
TIP22_MAIZE4.933e-1341.35Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1[more]
AQPZ_VIBVU4.933e-1335.19Aquaporin Z OS=Vibrio vulnificus GN=aqpZ PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00066 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00066 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622975 ID=BQ622975; Name=BQ622975; organism=Citrus sinensis; type=EST; length=469bp
CCAACGTCGTAGCCTCATGGCTACACCAAGGGTGATGGTCTTGGTGCCGA
GATTATTGGTACTTTTGTTCTTGTCTACACAGTTTTCTCTGCCACTGATG
CCAAACGGAGCGCCAGGGACTCTCATGTTCCTATTTTGGCTCCTCTGCCA
ATTGGGTTCGCTGTGTTTTTGGTTCACTTGGCCACTATCCCAATTACCGG
AACTGGCATCAACCCAGCGAGGAGTCTTGGAGCTGCAATCATCTACAACA
AGGACCGCGGTTGGGATGACCACTGGATTTTCTGGGTGGGACCATTCGTT
GGAGCTGGACTCGCAGCTTTGTACCACCAAGTCGTGATCAGAGCCATTCC
CTTCAAATGAAGCTGATCGCTTCATCAACGTTCGTGATTGCACCTGCATT
TGTTTATGGCTGTTGCTGGTTTGCTTATGTGTATTATAAAATATTAATTA
GTCCTTTGTTCAAATCTGC
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