BQ622976

Overview
NameBQ622976
Unique NameBQ622976
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length485
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7410 contig Csv1_Contig7410:1510..1995. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ622976 vs. ExPASy Swiss-Prot
Match: AL1B1_HUMAN (Aldehyde dehydrogenase X, mitochondrial OS=Homo sapiens GN=ALDH1B1 PE=1 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 1.392e-29
Identity = 64/119 (53.78%), Postives = 83/119 (69.75%), Query Frame = 3
Query:    3 VQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVV--QPVKN 353
            ++PTVF  V+DDM IA++EIFGPVQ + KFK+ ++V+ RAN TR+GLAA VFT+  D A    +AL+AGTVW+N Y++     PFGG+K SG GRE G   L AY +VK V    P KN
Sbjct:  398 IKPTVFGGVQDDMRIAKEEIFGPVQPLFKFKKIEEVVERANNTRYGLAAAVFTRDLDKAMYFTQALQAGTVWVNTYNIVTCHTPFGGFKESGNGRELGEDGLKAYTEVKTVTIKVPQKN 516          
BLAST of BQ622976 vs. ExPASy Swiss-Prot
Match: BETB_BRUSU (Betaine aldehyde dehydrogenase OS=Brucella suis GN=betB PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 1.818e-29
Identity = 60/111 (54.05%), Postives = 80/111 (72.07%), Query Frame = 3
Query:    3 VQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 335
            ++PTVF+DV D M IA++EIFGPV S+L+F + D+VI RAN + FGLAAGVFT      + ++  ++AGT WIN Y++    +PFGGYK SGIGRE GI +L  Y Q+K V
Sbjct:  366 IEPTVFADVTDTMTIAREEIFGPVMSVLEFSDEDEVIARANDSEFGLAAGVFTADLSRGHHVIGQIKAGTCWINAYNLTPVEVPFGGYKQSGIGRENGIAALAHYSQIKTV 476          
BLAST of BQ622976 vs. ExPASy Swiss-Prot
Match: BETB_BRUSI (Betaine aldehyde dehydrogenase OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=betB PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 1.818e-29
Identity = 60/111 (54.05%), Postives = 80/111 (72.07%), Query Frame = 3
Query:    3 VQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 335
            ++PTVF+DV D M IA++EIFGPV S+L+F + D+VI RAN + FGLAAGVFT      + ++  ++AGT WIN Y++    +PFGGYK SGIGRE GI +L  Y Q+K V
Sbjct:  366 IEPTVFADVTDTMTIAREEIFGPVMSVLEFSDEDEVIARANDSEFGLAAGVFTADLSRGHHVIGQIKAGTCWINAYNLTPVEVPFGGYKQSGIGRENGIAALAHYSQIKTV 476          
BLAST of BQ622976 vs. ExPASy Swiss-Prot
Match: BETB_BRUO2 (Betaine aldehyde dehydrogenase OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=betB PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 1.818e-29
Identity = 60/111 (54.05%), Postives = 80/111 (72.07%), Query Frame = 3
Query:    3 VQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 335
            ++PTVF+DV D M IA++EIFGPV S+L+F + D+VI RAN + FGLAAGVFT      + ++  ++AGT WIN Y++    +PFGGYK SGIGRE GI +L  Y Q+K V
Sbjct:  366 IEPTVFADVTDTMTIAREEIFGPVMSVLEFSDEDEVIARANDSEFGLAAGVFTADLSRGHHVIGQIKAGTCWINAYNLTPVEVPFGGYKQSGIGRENGIAALAHYSQIKTV 476          
BLAST of BQ622976 vs. ExPASy Swiss-Prot
Match: BETB_BRUME (Betaine aldehyde dehydrogenase OS=Brucella melitensis GN=betB PE=3 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 1.818e-29
Identity = 60/111 (54.05%), Postives = 80/111 (72.07%), Query Frame = 3
Query:    3 VQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 335
            ++PTVF+DV D M IA++EIFGPV S+L+F + D+VI RAN + FGLAAGVFT      + ++  ++AGT WIN Y++    +PFGGYK SGIGRE GI +L  Y Q+K V
Sbjct:  366 IEPTVFADVTDTMTIAREEIFGPVMSVLEFSDEDEVIARANDSEFGLAAGVFTADLSRGHHVIGQIKAGTCWINAYNLTPVEVPFGGYKQSGIGRENGIAALAHYSQIKTV 476          
BLAST of BQ622976 vs. ExPASy Swiss-Prot
Match: BETB_BRUC2 (Betaine aldehyde dehydrogenase OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=betB PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 1.818e-29
Identity = 60/111 (54.05%), Postives = 80/111 (72.07%), Query Frame = 3
Query:    3 VQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 335
            ++PTVF+DV D M IA++EIFGPV S+L+F + D+VI RAN + FGLAAGVFT      + ++  ++AGT WIN Y++    +PFGGYK SGIGRE GI +L  Y Q+K V
Sbjct:  366 IEPTVFADVTDTMTIAREEIFGPVMSVLEFSDEDEVIARANDSEFGLAAGVFTADLSRGHHVIGQIKAGTCWINAYNLTPVEVPFGGYKQSGIGRENGIAALAHYSQIKTV 476          
BLAST of BQ622976 vs. ExPASy Swiss-Prot
Match: BETB_BRUAB (Betaine aldehyde dehydrogenase OS=Brucella abortus GN=betB PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 1.818e-29
Identity = 60/111 (54.05%), Postives = 80/111 (72.07%), Query Frame = 3
Query:    3 VQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 335
            ++PTVF+DV D M IA++EIFGPV S+L+F + D+VI RAN + FGLAAGVFT      + ++  ++AGT WIN Y++    +PFGGYK SGIGRE GI +L  Y Q+K V
Sbjct:  366 IEPTVFADVTDTMTIAREEIFGPVMSVLEFSDEDEVIARANDSEFGLAAGVFTADLSRGHHVIGQIKAGTCWINAYNLTPVEVPFGGYKQSGIGRENGIAALAHYSQIKTV 476          
BLAST of BQ622976 vs. ExPASy Swiss-Prot
Match: BETB_BRUA2 (Betaine aldehyde dehydrogenase OS=Brucella abortus (strain 2308) GN=betB PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 1.818e-29
Identity = 60/111 (54.05%), Postives = 80/111 (72.07%), Query Frame = 3
Query:    3 VQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 335
            ++PTVF+DV D M IA++EIFGPV S+L+F + D+VI RAN + FGLAAGVFT      + ++  ++AGT WIN Y++    +PFGGYK SGIGRE GI +L  Y Q+K V
Sbjct:  366 IEPTVFADVTDTMTIAREEIFGPVMSVLEFSDEDEVIARANDSEFGLAAGVFTADLSRGHHVIGQIKAGTCWINAYNLTPVEVPFGGYKQSGIGRENGIAALAHYSQIKTV 476          
BLAST of BQ622976 vs. ExPASy Swiss-Prot
Match: BETB_BRUA1 (Betaine aldehyde dehydrogenase OS=Brucella abortus (strain S19) GN=betB PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 1.818e-29
Identity = 60/111 (54.05%), Postives = 80/111 (72.07%), Query Frame = 3
Query:    3 VQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 335
            ++PTVF+DV D M IA++EIFGPV S+L+F + D+VI RAN + FGLAAGVFT      + ++  ++AGT WIN Y++    +PFGGYK SGIGRE GI +L  Y Q+K V
Sbjct:  366 IEPTVFADVTDTMTIAREEIFGPVMSVLEFSDEDEVIARANDSEFGLAAGVFTADLSRGHHVIGQIKAGTCWINAYNLTPVEVPFGGYKQSGIGRENGIAALAHYSQIKTV 476          
BLAST of BQ622976 vs. ExPASy Swiss-Prot
Match: YF19_SCHPO (Putative aldehyde dehydrogenase-like protein C9E9.09c OS=Schizosaccharomyces pombe GN=SPAC9E9.09c PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 3.101e-29
Identity = 59/111 (53.15%), Postives = 78/111 (70.27%), Query Frame = 3
Query:    3 VQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 335
            V+PT+ S+V +DM + ++EIFGPV +++KFK  ++ IRR N + +GLAAGV T +   A  +  AL AGTVW+NCY++    IPFGGYK SGIGRE G Y L  Y Q KAV
Sbjct:  383 VEPTILSNVTEDMAVGKEEIFGPVLAVIKFKTIEEAIRRGNNSTYGLAAGVHTNNITNAIKVSNALEAGTVWVNCYNLLHHQIPFGGYKESGIGRELGSYGLTNYTQTKAV 493          
The following BLAST results are available for this feature:
BLAST of BQ622976 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 341
Match NameE-valueIdentityDescription
AL1B1_HUMAN1.392e-2953.78Aldehyde dehydrogenase X, mitochondrial OS=Homo sa... [more]
BETB_BRUSU1.818e-2954.05Betaine aldehyde dehydrogenase OS=Brucella suis GN... [more]
BETB_BRUSI1.818e-2954.05Betaine aldehyde dehydrogenase OS=Brucella suis (s... [more]
BETB_BRUO21.818e-2954.05Betaine aldehyde dehydrogenase OS=Brucella ovis (s... [more]
BETB_BRUME1.818e-2954.05Betaine aldehyde dehydrogenase OS=Brucella meliten... [more]
BETB_BRUC21.818e-2954.05Betaine aldehyde dehydrogenase OS=Brucella canis (... [more]
BETB_BRUAB1.818e-2954.05Betaine aldehyde dehydrogenase OS=Brucella abortus... [more]
BETB_BRUA21.818e-2954.05Betaine aldehyde dehydrogenase OS=Brucella abortus... [more]
BETB_BRUA11.818e-2954.05Betaine aldehyde dehydrogenase OS=Brucella abortus... [more]
YF19_SCHPO3.101e-2953.15Putative aldehyde dehydrogenase-like protein C9E9.... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00067 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00067 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622976 ID=BQ622976; Name=BQ622976; organism=Citrus sinensis; type=EST; length=485bp
TTGTTCAGCCAACTGTCTTCTCAGATGTTAAGGATGACATGTTGATAGCA
CAGGATGAAATCTTTGGCCCGGTGCAATCCATCTTGAAGTTCAAGGAAAC
TGATGACGTTATAAGAAGAGCAAATAAAACACGCTTTGGTCTAGCTGCTG
GGGTTTTCACCAAGAGTGCAGACACTGCTAACACCATGATGCGTGCACTG
AGAGCTGGGACTGTATGGATTAACTGCTACGACGTGTTTGATGCTGCTAT
TCCTTTCGGTGGGTACAAGCTGAGTGGCATAGGCCGGGAAAAGGGAATTT
ACAGCCTTAACGCTTACTTGCAAGTAAAGGCCGTCGTTCAACCTGTGAAG
AACCCAGCATGGCTCTAGTTTCCTGAAGTTCCCCCTCCCTTTTAATCTGT
GTTTATGAATAAGGACAGCGTGCAATATCAGCTTGTAATTATGGAGCAAA
TGGATAATTTACTTTAAAAGAACTTACTTTCTTTT
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