BQ622976

Overview
NameBQ622976
Unique NameBQ622976
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length485
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7410 contig Csv1_Contig7410:1510..1995. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ622976 vs. ExPASy Swiss-Prot
Match: ALDH_AGABI (Aldehyde dehydrogenase OS=Agaricus bisporus GN=aldA PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 6.909e-29
Identity = 57/111 (51.35%), Postives = 80/111 (72.07%), Query Frame = 3
Query:    3 VQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 335
            +QPT+F+D   DM I ++EIFGPV +++KFK+  +VI++AN + +GLAA VF++  + A     A +AGT W+NC +  DA +PFGGYK SGIGRE G Y+L+ Y  VKAV
Sbjct:  382 IQPTIFTDTTPDMKIVKEEIFGPVGAVIKFKDGKEVIKQANDSNYGLAAAVFSQDINKAIETAHAFKAGTAWVNCANTIDAGVPFGGYKQSGIGRELGEYALHNYTNVKAV 492          
BLAST of BQ622976 vs. ExPASy Swiss-Prot
Match: ALDH4_YEAST (Potassium-activated aldehyde dehydrogenase, mitochondrial OS=Saccharomyces cerevisiae GN=ALD4 PE=1 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 9.023e-29
Identity = 59/111 (53.15%), Postives = 80/111 (72.07%), Query Frame = 3
Query:    3 VQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 335
            ++PTVF DVK+DM I ++EIFGPV ++ KFK  D+VI  AN + +GLAAG+ T + +TA  +   + AGTVWIN Y+ F  A+PFGG+  SG+GRE  + +L  YLQVKAV
Sbjct:  403 IKPTVFGDVKEDMRIVKEEIFGPVVTVTKFKSADEVINMANDSEYGLAAGIHTSNINTALKVADRVNAGTVWINTYNDFHHAVPFGGFNASGLGREMSVDALQNYLQVKAV 513          
BLAST of BQ622976 vs. ExPASy Swiss-Prot
Match: AL1A2_TAEGU (Retinal dehydrogenase 2 OS=Taeniopygia guttata GN=ALDH1A2 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.178e-28
Identity = 64/111 (57.66%), Postives = 79/111 (71.17%), Query Frame = 3
Query:    3 VQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 335
            ++PTVFS+V DDM IA++EIFGPVQ IL+FK  D+VI RAN + FGL A VFT   + A T+  A++AGTVWINCY+  +A  PFGG K SG GRE G   L  Y +VK V
Sbjct:  399 IEPTVFSNVTDDMRIAKEEIFGPVQEILRFKTMDEVIERANNSDFGLVAAVFTNDINKALTVSSAMQAGTVWINCYNALNAQSPFGGSK-SGNGREMGECGLREYSEVKTV 508          
BLAST of BQ622976 vs. ExPASy Swiss-Prot
Match: BETB_RHILO (Betaine aldehyde dehydrogenase OS=Rhizobium loti GN=betB PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.539e-28
Identity = 61/111 (54.95%), Postives = 80/111 (72.07%), Query Frame = 3
Query:    3 VQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 335
            V+PTVF+ V D M IA++EIFGPV S+LKF   D+VI RAN T FGLAAGVFT+    A+ ++  L+AGT WIN Y++    IPFGG+K SGIGRE  + +L  Y Q+K++
Sbjct:  366 VEPTVFTGVTDTMRIAREEIFGPVMSVLKFDGEDEVIDRANDTEFGLAAGVFTRDLPRAHRVIAELQAGTCWINAYNLTPVEIPFGGFKQSGIGRENSLAALALYSQLKSI 476          
BLAST of BQ622976 vs. ExPASy Swiss-Prot
Match: ALDH_EMENI (Aldehyde dehydrogenase OS=Emericella nidulans GN=aldA PE=3 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 1.539e-28
Identity = 61/111 (54.95%), Postives = 79/111 (71.17%), Query Frame = 3
Query:    3 VQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 335
            +QPTVF+DV  DM IAQ+EIFGPV +I KFK+  + I+  N T +GLAA V TK+ +TA  +  AL+AGTVWIN Y++     PFGG+K SG+GRE G Y+L  Y Q+K V
Sbjct:  377 IQPTVFTDVTSDMKIAQEEIFGPVVTIQKFKDEAEAIKIGNSTDYGLAAAVHTKNVNTAIRVSNALKAGTVWINNYNMISYQAPFGGFKQSGLGRELGSYALENYTQIKTV 487          
BLAST of BQ622976 vs. ExPASy Swiss-Prot
Match: ALDH2_LEITA (Aldehyde dehydrogenase, mitochondrial OS=Leishmania tarentolae GN=ALDH2 PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 2.010e-28
Identity = 58/111 (52.25%), Postives = 83/111 (74.77%), Query Frame = 3
Query:    3 VQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 335
            VQPT+FSDVK+DM I ++EIFGPV  ++K+K+ D+V++RAN + +GLAAG+ T+S DTA      L AGTVW+N ++ F  ++PFGG+K SGIGRE G   ++ Y + KA+
Sbjct:  378 VQPTIFSDVKEDMRICKEEIFGPVTCVMKYKDMDEVVKRANDSIYGLAAGICTRSMDTALRYSTYLNAGTVWVNTWNNFCPSMPFGGFKQSGIGRELGKEVVDMYTEPKAI 488          
BLAST of BQ622976 vs. ExPASy Swiss-Prot
Match: CROM_OMMSL (Omega-crystallin OS=Ommastrephes sloanei PE=2 SV=3)

HSP 1 Score: 123.635 bits (309), Expect = 4.478e-28
Identity = 61/119 (51.26%), Postives = 81/119 (68.07%), Query Frame = 3
Query:    3 VQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAVVQ--PVKN 353
            V+PTVFSDV D+M  +Q+EIFGPVQ I+KFK+ D+VI R N T +G+AA +FT   + + T   A+  GTVW+N Y+ +    PFGGYK SG+ RE G Y+L  Y +VK +V   P KN
Sbjct:  376 VEPTVFSDVTDEMKFSQEEIFGPVQLIMKFKDMDEVIDRCNNTDYGMAAAIFTNDINRSITFTHAMYCGTVWVNTYNHWFPQAPFGGYKKSGLYREMGKYTLQEYTEVKNIVYRIPQKN 494          
BLAST of BQ622976 vs. ExPASy Swiss-Prot
Match: BETB_RHILW (Betaine aldehyde dehydrogenase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=betB PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 7.638e-28
Identity = 61/121 (50.41%), Postives = 82/121 (67.77%), Query Frame = 3
Query:    3 VQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV---VQPVKNP 356
            +QPTVF+DV DDM IA++EIFGPV S+L F + D+VI RAN + FGL+ GVFT     A+ ++  L AGT+WIN Y++    IPFGG K SG GRE  + +L  Y ++K V   + PV+ P
Sbjct:  366 IQPTVFADVTDDMTIAREEIFGPVMSVLDFDDEDEVIARANASEFGLSGGVFTADLSRAHRVVDRLEAGTLWINAYNLAPVEIPFGGSKQSGFGRENSLAALEHYSELKTVYVGMGPVQAP 486          
BLAST of BQ622976 vs. ExPASy Swiss-Prot
Match: BETB_PSEPF (Betaine aldehyde dehydrogenase OS=Pseudomonas fluorescens (strain Pf0-1) GN=betB PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 9.976e-28
Identity = 58/111 (52.25%), Postives = 79/111 (71.17%), Query Frame = 3
Query:    3 VQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 335
            V PTVF+D  DDM I ++EIFGPV +IL ++  ++VIRRAN T FGLAAG+ T+  + A+ ++  L AG  WIN +   DA +P GGYK SG+GRE GI SLN + ++K+V
Sbjct:  369 VAPTVFTDCTDDMTIVREEIFGPVMAILSYETEEEVIRRANDTDFGLAAGIVTRDLNRAHRVIHQLEAGICWINAWGESDAKMPVGGYKQSGVGRENGISSLNNFTRIKSV 479          
BLAST of BQ622976 vs. ExPASy Swiss-Prot
Match: BETB_PSEF5 (Betaine aldehyde dehydrogenase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=betB PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 9.976e-28
Identity = 59/111 (53.15%), Postives = 79/111 (71.17%), Query Frame = 3
Query:    3 VQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 335
            V PTVF+D  DDM I ++EIFGPV +IL ++  ++VIRRAN T FGLAAG+ TK  + A+ ++  L AG  WIN +   DA +P GGYK SG+GRE GI SLN + ++K+V
Sbjct:  369 VAPTVFTDCTDDMTIVREEIFGPVMAILTYETEEEVIRRANDTDFGLAAGLVTKDLNRAHRVIHQLEAGICWINAWGESDAKMPVGGYKQSGVGRENGISSLNNFTRIKSV 479          
The following BLAST results are available for this feature:
BLAST of BQ622976 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 341
Match NameE-valueIdentityDescription
ALDH_AGABI6.909e-2951.35Aldehyde dehydrogenase OS=Agaricus bisporus GN=ald... [more]
ALDH4_YEAST9.023e-2953.15Potassium-activated aldehyde dehydrogenase, mitoch... [more]
AL1A2_TAEGU1.178e-2857.66Retinal dehydrogenase 2 OS=Taeniopygia guttata GN=... [more]
BETB_RHILO1.539e-2854.95Betaine aldehyde dehydrogenase OS=Rhizobium loti G... [more]
ALDH_EMENI1.539e-2854.95Aldehyde dehydrogenase OS=Emericella nidulans GN=a... [more]
ALDH2_LEITA2.010e-2852.25Aldehyde dehydrogenase, mitochondrial OS=Leishmani... [more]
CROM_OMMSL4.478e-2851.26Omega-crystallin OS=Ommastrephes sloanei PE=2 SV=3[more]
BETB_RHILW7.638e-2850.41Betaine aldehyde dehydrogenase OS=Rhizobium legumi... [more]
BETB_PSEPF9.976e-2852.25Betaine aldehyde dehydrogenase OS=Pseudomonas fluo... [more]
BETB_PSEF59.976e-2853.15Betaine aldehyde dehydrogenase OS=Pseudomonas fluo... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00067 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00067 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622976 ID=BQ622976; Name=BQ622976; organism=Citrus sinensis; type=EST; length=485bp
TTGTTCAGCCAACTGTCTTCTCAGATGTTAAGGATGACATGTTGATAGCA
CAGGATGAAATCTTTGGCCCGGTGCAATCCATCTTGAAGTTCAAGGAAAC
TGATGACGTTATAAGAAGAGCAAATAAAACACGCTTTGGTCTAGCTGCTG
GGGTTTTCACCAAGAGTGCAGACACTGCTAACACCATGATGCGTGCACTG
AGAGCTGGGACTGTATGGATTAACTGCTACGACGTGTTTGATGCTGCTAT
TCCTTTCGGTGGGTACAAGCTGAGTGGCATAGGCCGGGAAAAGGGAATTT
ACAGCCTTAACGCTTACTTGCAAGTAAAGGCCGTCGTTCAACCTGTGAAG
AACCCAGCATGGCTCTAGTTTCCTGAAGTTCCCCCTCCCTTTTAATCTGT
GTTTATGAATAAGGACAGCGTGCAATATCAGCTTGTAATTATGGAGCAAA
TGGATAATTTACTTTAAAAGAACTTACTTTCTTTT
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