BQ622976

Overview
NameBQ622976
Unique NameBQ622976
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length485
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7410 contig Csv1_Contig7410:1510..1995. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ622976 vs. ExPASy Swiss-Prot
Match: BETB_ECOSE (Betaine aldehyde dehydrogenase OS=Escherichia coli (strain SE11) GN=betB PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 8.445e-27
Identity = 56/111 (50.45%), Postives = 78/111 (70.27%), Query Frame = 3
Query:    3 VQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 335
            V PTVF+D +D+M I ++EIFGPV S+L ++  D+VIRRAN T +GLAAG+ T   + A+ ++  L AG  WIN +    A +P GGYK SGIGRE G+ +L +Y QVK++
Sbjct:  369 VAPTVFTDCRDEMTIVREEIFGPVMSLLTYESEDEVIRRANDTDYGLAAGIVTADLNRAHRVIHQLEAGICWINTWGESPAEMPVGGYKHSGIGRENGVMTLQSYTQVKSI 479          
BLAST of BQ622976 vs. ExPASy Swiss-Prot
Match: BETB_ECOLU (Betaine aldehyde dehydrogenase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=betB PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 8.445e-27
Identity = 56/111 (50.45%), Postives = 78/111 (70.27%), Query Frame = 3
Query:    3 VQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 335
            V PTVF+D +D+M I ++EIFGPV S+L ++  D+VIRRAN T +GLAAG+ T   + A+ ++  L AG  WIN +    A +P GGYK SGIGRE G+ +L +Y QVK++
Sbjct:  369 VAPTVFTDCRDEMTIVREEIFGPVMSLLTYESEDEVIRRANDTDYGLAAGIVTADLNRAHRVIHQLEAGICWINTWGESPAEMPVGGYKHSGIGRENGVMTLQSYTQVKSI 479          
BLAST of BQ622976 vs. ExPASy Swiss-Prot
Match: BETB_ECO5E (Betaine aldehyde dehydrogenase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=betB PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 8.445e-27
Identity = 57/111 (51.35%), Postives = 77/111 (69.37%), Query Frame = 3
Query:    3 VQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 335
            V PTVF+D  D+M I ++EIFGPV SIL ++  D+VIRRAN T +GLAAG+ T   + A+ ++  L AG  WIN +    A +P GGYK SGIGRE G+ +L +Y QVK++
Sbjct:  369 VAPTVFTDCSDEMTIVREEIFGPVMSILTYESEDEVIRRANDTDYGLAAGIVTADLNRAHRVIHQLEAGICWINTWGESPAEMPVGGYKHSGIGRENGVMTLQSYTQVKSI 479          
BLAST of BQ622976 vs. ExPASy Swiss-Prot
Match: BETB_ECO57 (Betaine aldehyde dehydrogenase OS=Escherichia coli O157:H7 GN=betB PE=3 SV=3)

HSP 1 Score: 119.398 bits (298), Expect = 8.445e-27
Identity = 57/111 (51.35%), Postives = 77/111 (69.37%), Query Frame = 3
Query:    3 VQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 335
            V PTVF+D  D+M I ++EIFGPV SIL ++  D+VIRRAN T +GLAAG+ T   + A+ ++  L AG  WIN +    A +P GGYK SGIGRE G+ +L +Y QVK++
Sbjct:  369 VAPTVFTDCSDEMTIVREEIFGPVMSILTYESEDEVIRRANDTDYGLAAGIVTADLNRAHRVIHQLEAGICWINTWGESPAEMPVGGYKHSGIGRENGVMTLQSYTQVKSI 479          
BLAST of BQ622976 vs. ExPASy Swiss-Prot
Match: BETB_AGRRK (Betaine aldehyde dehydrogenase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=betB PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 8.445e-27
Identity = 61/121 (50.41%), Postives = 80/121 (66.12%), Query Frame = 3
Query:    3 VQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV---VQPVKNP 356
            VQPTVF+DV DDM IA++EIFGPV  +L F +  +VI RAN T FGL+ GVFT     A+ ++  L AGT+WIN Y++    IPFGG K SG GRE  + +L  Y ++K V   + PV+ P
Sbjct:  366 VQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEAEVIARANDTEFGLSGGVFTADLTRAHRVVDQLEAGTLWINAYNLAPVEIPFGGSKQSGFGRENSLAALEHYSELKTVYVGMGPVQAP 486          
BLAST of BQ622976 vs. ExPASy Swiss-Prot
Match: BETB1_RHIME (Betaine aldehyde dehydrogenase 1 OS=Rhizobium meliloti GN=betB1 PE=3 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 8.445e-27
Identity = 61/121 (50.41%), Postives = 80/121 (66.12%), Query Frame = 3
Query:    3 VQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV---VQPVKNP 356
            +QPTVF+DV D M IA++EIFGPV  +L F +  +VI RAN T FGL+AGVFT     A+ +   L AGT+WIN Y++    IPFGG K SG GRE  + +LN Y ++K V   + PV+ P
Sbjct:  366 IQPTVFADVTDGMTIAREEIFGPVMCVLDFDDEVEVIARANATEFGLSAGVFTADLTRAHRVADRLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSVAALNHYTELKTVYVGMGPVEAP 486          
BLAST of BQ622976 vs. ExPASy Swiss-Prot
Match: FTHFD_XENTR (10-formyltetrahydrofolate dehydrogenase OS=Xenopus tropicalis GN=aldh1l1 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.103e-26
Identity = 58/112 (51.79%), Postives = 80/112 (71.43%), Query Frame = 3
Query:    6 QPTVFSDVKDDMLIAQDEIFGPVQSILKFKE--TDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 335
            +PT+F+DV D+M IA++E FGP+  I KFK+   D+V++RAN T FGLA+GVFTK    A  +   L+AGTV++N Y+  D A PFGG+K SG G++ G  +LN YL+ KAV
Sbjct:  787 EPTIFTDVTDEMFIAKEESFGPIMIISKFKDGDVDEVLKRANNTEFGLASGVFTKDISKALYVSEKLQAGTVFVNTYNKTDVAAPFGGFKQSGFGKDLGEEALNEYLKTKAV 898          
BLAST of BQ622976 vs. ExPASy Swiss-Prot
Match: BETB_PECCP (Betaine aldehyde dehydrogenase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=betB PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.103e-26
Identity = 58/111 (52.25%), Postives = 77/111 (69.37%), Query Frame = 3
Query:    3 VQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 335
            V PTVF+D +DDM I ++EIFGPV SIL ++  D+VIRRAN + +GLAAGV T   + A+ ++  L AG  WIN +    A +P GGYK SG+GRE GI +L  Y Q+K+V
Sbjct:  369 VAPTVFTDCRDDMKIVREEIFGPVMSILTYQNEDEVIRRANDSEYGLAAGVVTGDLNRAHRVIHQLEAGICWINTWGESPAEMPVGGYKHSGVGRENGITTLEHYTQIKSV 479          
BLAST of BQ622976 vs. ExPASy Swiss-Prot
Match: BETB_MARMS (Betaine aldehyde dehydrogenase OS=Marinomonas sp. (strain MWYL1) GN=betB PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.103e-26
Identity = 61/111 (54.95%), Postives = 75/111 (67.57%), Query Frame = 3
Query:    3 VQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 335
            V PTVF+D  DDM   +DEIFGPV S+L F + D+VI RAN T+ GLAAGVFTK    A+ ++  L+AG  WIN +    A +P GGYK SGIGRE GI +L  Y Q K+V
Sbjct:  364 VAPTVFTDCTDDMPQVRDEIFGPVMSVLSFTDEDEVIARANDTKLGLAAGVFTKDFARAHRVINQLQAGICWINSWGASPAEMPVGGYKQSGIGRENGIETLYHYTQNKSV 474          
BLAST of BQ622976 vs. ExPASy Swiss-Prot
Match: BETB_ERWCT (Betaine aldehyde dehydrogenase OS=Erwinia carotovora subsp. atroseptica GN=betB PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.103e-26
Identity = 55/111 (49.55%), Postives = 78/111 (70.27%), Query Frame = 3
Query:    3 VQPTVFSDVKDDMLIAQDEIFGPVQSILKFKETDDVIRRANKTRFGLAAGVFTKSADTANTMMRALRAGTVWINCYDVFDAAIPFGGYKLSGIGREKGIYSLNAYLQVKAV 335
            V PTVF+D +DDM I + EIFGPV SIL +++ D+VIRRAN + +GLAAG+ T+  + A+ ++  L AG  WIN +    A +P GGYK SG+GRE G+ +L  Y Q+K++
Sbjct:  369 VAPTVFTDCRDDMKIVRKEIFGPVMSILTYQDEDEVIRRANDSEYGLAAGIVTRDLNRAHRVIHQLEAGICWINTWGESPAEMPVGGYKHSGVGRENGVTTLEHYTQIKSI 479          
The following BLAST results are available for this feature:
BLAST of BQ622976 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 341
Match NameE-valueIdentityDescription
BETB_ECOSE8.445e-2750.45Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECOLU8.445e-2750.45Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECO5E8.445e-2751.35Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_ECO578.445e-2751.35Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
BETB_AGRRK8.445e-2750.41Betaine aldehyde dehydrogenase OS=Agrobacterium ra... [more]
BETB1_RHIME8.445e-2750.41Betaine aldehyde dehydrogenase 1 OS=Rhizobium meli... [more]
FTHFD_XENTR1.103e-2651.7910-formyltetrahydrofolate dehydrogenase OS=Xenopus... [more]
BETB_PECCP1.103e-2652.25Betaine aldehyde dehydrogenase OS=Pectobacterium c... [more]
BETB_MARMS1.103e-2654.95Betaine aldehyde dehydrogenase OS=Marinomonas sp. ... [more]
BETB_ERWCT1.103e-2649.55Betaine aldehyde dehydrogenase OS=Erwinia carotovo... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00067 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00067 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622976 ID=BQ622976; Name=BQ622976; organism=Citrus sinensis; type=EST; length=485bp
TTGTTCAGCCAACTGTCTTCTCAGATGTTAAGGATGACATGTTGATAGCA
CAGGATGAAATCTTTGGCCCGGTGCAATCCATCTTGAAGTTCAAGGAAAC
TGATGACGTTATAAGAAGAGCAAATAAAACACGCTTTGGTCTAGCTGCTG
GGGTTTTCACCAAGAGTGCAGACACTGCTAACACCATGATGCGTGCACTG
AGAGCTGGGACTGTATGGATTAACTGCTACGACGTGTTTGATGCTGCTAT
TCCTTTCGGTGGGTACAAGCTGAGTGGCATAGGCCGGGAAAAGGGAATTT
ACAGCCTTAACGCTTACTTGCAAGTAAAGGCCGTCGTTCAACCTGTGAAG
AACCCAGCATGGCTCTAGTTTCCTGAAGTTCCCCCTCCCTTTTAATCTGT
GTTTATGAATAAGGACAGCGTGCAATATCAGCTTGTAATTATGGAGCAAA
TGGATAATTTACTTTAAAAGAACTTACTTTCTTTT
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