BQ622981

Overview
NameBQ622981
Unique NameBQ622981
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length608
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13137 contig Csv1_Contig13137:46..650. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ622981 vs. ExPASy Swiss-Prot
Match: VATL1_ARATH (V-type proton ATPase 16 kDa proteolipid subunit c1/c3/c5 OS=Arabidopsis thaliana GN=VHA-C1 PE=1 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 2.682e-49
Identity = 109/161 (67.70%), Postives = 110/161 (68.32%), Query Frame = 3
Query:  120 FSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXXXXXXXXXXSSRAGQSRAD 602
            FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM                     SSRAGQSRA+
Sbjct:    4 FSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 164          
BLAST of BQ622981 vs. ExPASy Swiss-Prot
Match: VATL_TOBAC (V-type proton ATPase 16 kDa proteolipid subunit OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 5.976e-49
Identity = 111/166 (66.87%), Postives = 112/166 (67.47%), Query Frame = 3
Query:  105 MSSTLFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXXXXXXXXXXSSRAGQSRAD 602
            M ST FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPK KSYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM                     SSRAGQSRA+
Sbjct:    1 MPST-FSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKTKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 165          
BLAST of BQ622981 vs. ExPASy Swiss-Prot
Match: VATL_SOLLC (V-type proton ATPase 16 kDa proteolipid subunit OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.739e-48
Identity = 107/161 (66.46%), Postives = 109/161 (67.70%), Query Frame = 3
Query:  120 FSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXXXXXXXXXXSSRAGQSRAD 602
            F+GDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPK KSYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM                     SSRAGQSRA+
Sbjct:    4 FAGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKTKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 164          
BLAST of BQ622981 vs. ExPASy Swiss-Prot
Match: VATL_PLECA (V-type proton ATPase 16 kDa proteolipid subunit OS=Pleurochrysis carterae GN=VAP PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.409e-28
Identity = 72/128 (56.25%), Postives = 84/128 (65.62%), Query Frame = 3
Query:  135 TAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGI-NPKA--KSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGM 509
            TAP             + +GAAYGTAKSGVGV+SMGVM+P+LVMKSI+PVVMAGVLGIYGLIIAVII  G+  P+     Y  F G+                 +AIGIVGDAGVRA+AQQ KL+VGM
Sbjct:    8 TAPFFGFMGAAVALIFANLGAAYGTAKSGVGVSSMGVMKPDLVMKSIIPVVMAGVLGIYGLIIAVIIGNGVKGPEGGKPQYSSFTGFAHLAAGLACGLSGMAAGIAIGIVGDAGVRASAQQAKLYVGM 135          
BLAST of BQ622981 vs. ExPASy Swiss-Prot
Match: VATL_HELVI (V-type proton ATPase 16 kDa proteolipid subunit OS=Heliothis virescens GN=VHA16 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.409e-28
Identity = 60/109 (55.05%), Postives = 78/109 (71.56%), Query Frame = 3
Query:  183 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGM 509
            S +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL++AV+I+  ++  + +Y L+ G+                  AIGIVGDAGVR  AQQP+LFVGM
Sbjct:   23 SALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGSLDAPSNNYTLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGM 131          
BLAST of BQ622981 vs. ExPASy Swiss-Prot
Match: VATL_MANSE (V-type proton ATPase 16 kDa proteolipid subunit OS=Manduca sexta GN=VHA16 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 4.452e-28
Identity = 60/109 (55.05%), Postives = 78/109 (71.56%), Query Frame = 3
Query:  183 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGM 509
            S +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL++AV+I+  ++  + +Y L+ G+                  AIGIVGDAGVR  AQQP+LFVGM
Sbjct:   23 SALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGSLDSPSNNYTLYRGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGM 131          
BLAST of BQ622981 vs. ExPASy Swiss-Prot
Match: VATL_MAIZE (V-type proton ATPase 16 kDa proteolipid subunit (Fragment) OS=Zea mays PE=2 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 7.594e-28
Identity = 70/109 (64.22%), Postives = 70/109 (64.22%), Query Frame = 3
Query:  276 VPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXXXXXXXXXXSSRAGQSRAD 602
            VPVVMAGVLGIYGLIIAVIISTGINPKAK YYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM                     SSRAGQSRAD
Sbjct:    1 VPVVMAGVLGIYGLIIAVIISTGINPKAKPYYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 109          
BLAST of BQ622981 vs. ExPASy Swiss-Prot
Match: VATL_AEDAE (V-type proton ATPase 16 kDa proteolipid subunit OS=Aedes aegypti GN=AAEL000291 PE=2 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 3.769e-27
Identity = 61/109 (55.96%), Postives = 77/109 (70.64%), Query Frame = 3
Query:  183 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGM 509
            S +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL++AV+I+  ++   K Y L+ G+                  AIGIVGDAGVR  AQQP+LFVGM
Sbjct:   26 SALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGSLDTPTK-YSLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGM 133          
BLAST of BQ622981 vs. ExPASy Swiss-Prot
Match: VATL_NEUCR (V-type proton ATPase 16 kDa proteolipid subunit OS=Neurospora crassa GN=vma-3 PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 4.922e-27
Identity = 58/109 (53.21%), Postives = 79/109 (72.48%), Query Frame = 3
Query:  183 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGM 509
            +C+GA+YGTAKSGVG+A+MGV+RP+L++K+IVPV+MAG++GIYGL+++V+IS  +      Y L+ G+                  AIGIVGDAGVR  AQQP+LFVGM
Sbjct:   24 TCLGASYGTAKSGVGIAAMGVLRPDLIVKNIVPVIMAGIIGIYGLVVSVLISDALT--QDHYALYTGFIQLGAGLAVGLAGLAAGFAIGIVGDAGVRGTAQQPRLFVGM 130          
BLAST of BQ622981 vs. ExPASy Swiss-Prot
Match: VATL_DROME (V-type proton ATPase 16 kDa proteolipid subunit OS=Drosophila melanogaster GN=Vha16 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 4.922e-27
Identity = 61/109 (55.96%), Postives = 77/109 (70.64%), Query Frame = 3
Query:  183 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGM 509
            S +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL++AV+I+  +   +K Y L+ G+                  AIGIVGDAGVR  AQQP+LFVGM
Sbjct:   28 SALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGALEEPSK-YSLYRGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQPRLFVGM 135          
The following BLAST results are available for this feature:
BLAST of BQ622981 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
VATL1_ARATH2.682e-4967.70V-type proton ATPase 16 kDa proteolipid subunit c1... [more]
VATL_TOBAC5.976e-4966.87V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_SOLLC1.739e-4866.46V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_PLECA3.409e-2856.25V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_HELVI3.409e-2855.05V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_MANSE4.452e-2855.05V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_MAIZE7.594e-2864.22V-type proton ATPase 16 kDa proteolipid subunit (F... [more]
VATL_AEDAE3.769e-2755.96V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_NEUCR4.922e-2753.21V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_DROME4.922e-2755.96V-type proton ATPase 16 kDa proteolipid subunit OS... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00072 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00072 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622981 ID=BQ622981; Name=BQ622981; organism=Citrus sinensis; type=EST; length=608bp
TTTTTAGAAGTCATTAGTCTCCTCTTGAGAGAAAGAGCACCGGAACAAAT
AACGAAAACAAAACACACCGCCTCAAGTCTCAGATCCAGTCCGCATCTCC
CAAGATGTCTTCAACATTATTCAGTGGCGATGAAACCGCTCCATTCTTCG
GCTTTCTCGGCGCCGCTGCCGCCCTAGTCTTTTCCTGTATGGGAGCTGCG
TACGGAACGGCGAAGAGTGGCGTCGGTGTGGCGTCGATGGGAGTGATGAG
GCCGGAGCTTGTGATGAAATCGATCGTGCCCGTTGTTATGGCGGGAGTTT
TGGGTATTTACGGTTTGATTATTGCTGTTATTATTAGTACCGGAATTAAC
CCTAAGGCCAAATCTTATTACCTTTTCGATGGCTACGCGCATCTCTCTTC
TGGCCTCGCTTGTGGCCTTGCTGGTCTCTCCGCTGGTATGGCAATTGGGA
TCGTCGGTGATGCTGGTGTCAGAGCTAATGCTCAACAGCCGAAGCTTTTC
GTTGGGATGATCCTCATTCTGATCTTTGCCGAAGCGCTGGCACTTTATGG
ACTTATTGGTGGGATCATTCTTTCTTCTCGTGCTGGTCAGTCAAGAGCAG
ACTATAAG
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