BQ622981

Overview
NameBQ622981
Unique NameBQ622981
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length608
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ622981 vs. ExPASy Swiss-Prot
Match: VATL2_KLULA (V-type proton ATPase 16 kDa proteolipid subunit 2 OS=Kluyveromyces lactis GN=VMA11 PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 7.859e-25
Identity = 53/109 (48.62%), Postives = 76/109 (69.72%), Query Frame = 3
Query:  183 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGM 509
            SC+GAA GTAKSG+G++ +G  +PEL+MKS++PVVM+G+L +YGL++AV+I+ G++P  + Y LF+G+                  AIGIVGD GVR    QP+LFVG+
Sbjct:   30 SCLGAAIGTAKSGIGISGIGTFKPELIMKSLIPVVMSGILAVYGLVVAVLIAGGLSP-TEDYTLFNGFMHLSCGLCVGFACLSSGYAIGIVGDVGVRKYMHQPRLFVGI 137          
BLAST of BQ622981 vs. ExPASy Swiss-Prot
Match: VATL2_CANGA (V-type proton ATPase 16 kDa proteolipid subunit 2 OS=Candida glabrata GN=VMA11 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.341e-24
Identity = 54/109 (49.54%), Postives = 75/109 (68.81%), Query Frame = 3
Query:  183 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGM 509
            SC+GAA GTAKSG+G+A +G  +PEL+MKS++PVVM+G+L IYGL++AV+I+  ++P  + Y LF+G+                  AIGIVGD GVR    QP+LFVG+
Sbjct:   30 SCLGAAIGTAKSGIGIAGIGTFKPELIMKSLIPVVMSGILAIYGLVVAVLIAGNLSP-TEEYTLFNGFMHLSCGLCVGFACLSSGYAIGIVGDVGVRKYMHQPRLFVGI 137          
BLAST of BQ622981 vs. ExPASy Swiss-Prot
Match: VATL2_YEAST (V-type proton ATPase subunit c' OS=Saccharomyces cerevisiae GN=VMA11 PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.986e-24
Identity = 53/109 (48.62%), Postives = 75/109 (68.81%), Query Frame = 3
Query:  183 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGM 509
            SC+GAA GTAKSG+G+A +G  +PEL+MKS++PVVM+G+L IYGL++AV+I+  ++P  + Y LF+G+                  AIG+VGD GVR    QP+LFVG+
Sbjct:   30 SCLGAAIGTAKSGIGIAGIGTFKPELIMKSLIPVVMSGILAIYGLVVAVLIAGNLSP-TEDYTLFNGFMHLSCGLCVGFACLSSGYAIGMVGDVGVRKYMHQPRLFVGI 137          
BLAST of BQ622981 vs. ExPASy Swiss-Prot
Match: VATL1_CAEEL (V-type proton ATPase 16 kDa proteolipid subunit 1 OS=Caenorhabditis elegans GN=vha-1 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.986e-24
Identity = 54/106 (50.94%), Postives = 73/106 (68.87%), Query Frame = 3
Query:  192 GAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGM 509
            G+AYGTAK+G G+ASM V RP+LVMK+I+PVVMAG++ IYGL++AVI+S  + P   +Y + + +                  AIGI GDAGVRA +QQP++FVGM
Sbjct:   40 GSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIYGLVVAVIVSGKVEPAGANYTINNAFSQFAGGLVCGLCGLGAGYAIGIAGDAGVRALSQQPRMFVGM 145          
BLAST of BQ622981 vs. ExPASy Swiss-Prot
Match: VATL2_ASHGO (V-type proton ATPase 16 kDa proteolipid subunit 2 OS=Ashbya gossypii GN=VMA11 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 8.689e-24
Identity = 52/109 (47.71%), Postives = 75/109 (68.81%), Query Frame = 3
Query:  183 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGM 509
            S +GAA GTAKSG+G++ +G  RPEL+MKS++PVVM+G+L +YGL++AV+++ G++P  + Y LF+G+                  AIGIVGD GVR    QP+LFVG+
Sbjct:   29 SSLGAAIGTAKSGIGISGIGTFRPELIMKSLIPVVMSGILAVYGLVVAVLVAGGLSP-TEEYTLFNGFMHLAAGLCVGFACLSSGYAIGIVGDVGVRKFMHQPRLFVGI 136          
BLAST of BQ622981 vs. ExPASy Swiss-Prot
Match: VATL2_DEBHA (V-type proton ATPase 16 kDa proteolipid subunit 2 OS=Debaryomyces hansenii GN=VMA11 PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.135e-23
Identity = 51/109 (46.79%), Postives = 76/109 (69.72%), Query Frame = 3
Query:  183 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGM 509
            SC GAA GTAKSG+G++ +G  +PEL+MKS++PVVM+G+L +YGL+++V+I+ G++P  ++Y LF+G+                  +IGIVGD GVR    QP+LFVG+
Sbjct:   29 SCAGAAIGTAKSGIGISGIGTFKPELIMKSLIPVVMSGILSVYGLVVSVLIAGGLSP-TENYSLFNGFMHLACGLSVGFACLASGYSIGIVGDEGVRQFMHQPRLFVGI 136          
BLAST of BQ622981 vs. ExPASy Swiss-Prot
Match: VATL_CANTR (V-type proton ATPase 16 kDa proteolipid subunit OS=Candida tropicalis GN=VMA3 PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.482e-23
Identity = 53/109 (48.62%), Postives = 74/109 (67.89%), Query Frame = 3
Query:  183 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGM 509
            +C GA+YGTAKSGVG+ +  V RP+L++K++VPVVMAG++ IYGL+++V++S  ++ K     L+ G+                  AIGIVGDAGVR  AQQP+LFVGM
Sbjct:   24 TCFGASYGTAKSGVGICATSVTRPDLLVKNVVPVVMAGIIAIYGLVVSVLVSDSLSQKQA---LYTGFIQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRLFVGM 129          
BLAST of BQ622981 vs. ExPASy Swiss-Prot
Match: VATL_DICDI (V-type proton ATPase proteolipid subunit OS=Dictyostelium discoideum GN=vatP PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.528e-23
Identity = 57/107 (53.27%), Postives = 73/107 (68.22%), Query Frame = 3
Query:  189 MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGM 509
            MGAAYGTAK+ VG+++MGVM+P+LV+K+ +PV+ AGV+ IYGLII VI+  GI P A +Y L   +                 MAIGIVGD+GVRA  QQPKL+V M
Sbjct:   45 MGAAYGTAKASVGISNMGVMKPDLVIKAFIPVIFAGVIAIYGLIICVILVGGIKPNA-NYTLMKSFTDLGAGLTVGLCGLAAGMAIGIVGDSGVRAFGQQPKLYVIM 150          
BLAST of BQ622981 vs. ExPASy Swiss-Prot
Match: VATL_SCHPO (V-type proton ATPase 16 kDa proteolipid subunit OS=Schizosaccharomyces pombe GN=vma3 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.639e-22
Identity = 52/106 (49.06%), Postives = 73/106 (68.87%), Query Frame = 3
Query:  192 GAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGM 509
            GAAYGTAK+GVG+++MGV+RP+L++K+ +PVVMAG++ IYGL+++V+IS  +    +   L+ G+                  AIGIVGDAGVR  AQQP+LFV M
Sbjct:   28 GAAYGTAKAGVGISAMGVLRPDLIVKNTIPVVMAGIIAIYGLVVSVLISGNLK---QILSLYSGFIQLGAGLSVGLAGLAAGFAIGIVGDAGVRGTAQQPRLFVAM 130          
BLAST of BQ622981 vs. ExPASy Swiss-Prot
Match: VATL1_YEAST (V-type proton ATPase subunit c OS=Saccharomyces cerevisiae GN=VMA3 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 8.133e-22
Identity = 51/107 (47.66%), Postives = 72/107 (67.29%), Query Frame = 3
Query:  189 MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGM 509
            +GAAYGTAKSGVG+ +  V+RP+L+ K+IVPV+MAG++ IYGL+++V++   +  K     L+ G+                  AIGIVGDAGVR ++QQP+LFVGM
Sbjct:   26 LGAAYGTAKSGVGICATCVLRPDLLFKNIVPVIMAGIIAIYGLVVSVLVCYSLGQKQA---LYTGFIQLGAGLSVGLSGLAAGFAIGIVGDAGVRGSSQQPRLFVGM 129          
The following BLAST results are available for this feature:
BLAST of BQ622981 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
VATL2_KLULA7.859e-2548.62V-type proton ATPase 16 kDa proteolipid subunit 2 ... [more]
VATL2_CANGA1.341e-2449.54V-type proton ATPase 16 kDa proteolipid subunit 2 ... [more]
VATL2_YEAST2.986e-2448.62V-type proton ATPase subunit c' OS=Saccharomyces c... [more]
VATL1_CAEEL2.986e-2450.94V-type proton ATPase 16 kDa proteolipid subunit 1 ... [more]
VATL2_ASHGO8.689e-2447.71V-type proton ATPase 16 kDa proteolipid subunit 2 ... [more]
VATL2_DEBHA1.135e-2346.79V-type proton ATPase 16 kDa proteolipid subunit 2 ... [more]
VATL_CANTR1.482e-2348.62V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_DICDI2.528e-2353.27V-type proton ATPase proteolipid subunit OS=Dictyo... [more]
VATL_SCHPO1.639e-2249.06V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL1_YEAST8.133e-2247.66V-type proton ATPase subunit c OS=Saccharomyces ce... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00072 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00072 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622981 ID=BQ622981; Name=BQ622981; organism=Citrus sinensis; type=EST; length=608bp
TTTTTAGAAGTCATTAGTCTCCTCTTGAGAGAAAGAGCACCGGAACAAAT
AACGAAAACAAAACACACCGCCTCAAGTCTCAGATCCAGTCCGCATCTCC
CAAGATGTCTTCAACATTATTCAGTGGCGATGAAACCGCTCCATTCTTCG
GCTTTCTCGGCGCCGCTGCCGCCCTAGTCTTTTCCTGTATGGGAGCTGCG
TACGGAACGGCGAAGAGTGGCGTCGGTGTGGCGTCGATGGGAGTGATGAG
GCCGGAGCTTGTGATGAAATCGATCGTGCCCGTTGTTATGGCGGGAGTTT
TGGGTATTTACGGTTTGATTATTGCTGTTATTATTAGTACCGGAATTAAC
CCTAAGGCCAAATCTTATTACCTTTTCGATGGCTACGCGCATCTCTCTTC
TGGCCTCGCTTGTGGCCTTGCTGGTCTCTCCGCTGGTATGGCAATTGGGA
TCGTCGGTGATGCTGGTGTCAGAGCTAATGCTCAACAGCCGAAGCTTTTC
GTTGGGATGATCCTCATTCTGATCTTTGCCGAAGCGCTGGCACTTTATGG
ACTTATTGGTGGGATCATTCTTTCTTCTCGTGCTGGTCAGTCAAGAGCAG
ACTATAAG
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