BQ622985

Overview
NameBQ622985
Unique NameBQ622985
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length616
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ622985 vs. ExPASy Swiss-Prot
Match: CADH2_PICAB (Probable cinnamyl alcohol dehydrogenase 2 OS=Picea abies GN=CAD2 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 8.473e-19
Identity = 43/108 (39.81%), Postives = 70/108 (64.81%), Query Frame = 3
Query:    3 DFIIDTASGDHPFDAYMSLLKVAGVYVLVGF-PSEVKFSPASLNIGAKTVSGSVTGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNS 323
            D+I+DT    HP + Y++LLK  G  V++G  P  + F    L +G ++++GS  G  ++TQE L++CA  K+   IE + ++ +N A+ERL+K DV+YRFV+D+  S
Sbjct:  246 DYIMDTIPVAHPLEPYLALLKTNGKLVMLGVVPEPLHFVTPLLILGRRSIAGSFIGSMEETQETLDFCAEKKVSSMIEVVGLDYINTAMERLVKNDVRYRFVVDVARS 353          
BLAST of BQ622985 vs. ExPASy Swiss-Prot
Match: CADH1_TOBAC (Probable cinnamyl alcohol dehydrogenase 1 OS=Nicotiana tabacum GN=CAD14 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 8.473e-19
Identity = 44/108 (40.74%), Postives = 71/108 (65.74%), Query Frame = 3
Query:    3 DFIIDTASGDHPFDAYMSLLKVAGVYVLVG-FPSEVKFSPASLNIGAKTVSGSVTGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNS 323
            D+IIDT    HP + Y+SLLK+ G  +L+G   + ++F    + +G K+++GS  G  K+T+EML++C    +  QIE + ++ +N A+ERL K DV+YRFV+D+  S
Sbjct:  246 DYIIDTVPVGHPLEPYLSLLKIDGKLILMGVINTPLQFISPMVMLGRKSITGSFIGSMKETEEMLDFCKEKGVTSQIEIVKMDYINTAMERLEKNDVRYRFVVDVIGS 353          
BLAST of BQ622985 vs. ExPASy Swiss-Prot
Match: YAHK_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein yahK OS=Escherichia coli (strain K12) GN=yahK PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.107e-18
Identity = 48/105 (45.71%), Postives = 66/105 (62.86%), Query Frame = 3
Query:    3 DFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSEVKFSPASLNIGAK--TVSGSVTGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVID 311
            DFI++T +  H  D + +LLK  G   LVG P+    SP   N+  K   ++GS+ GG  +TQEML++CA H I   IE I  + +NEA ER+++ DVKYRFVID
Sbjct:  239 DFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPETQEMLDFCAEHGIVADIEMIRADQINEAYERMLRGDVKYRFVID 343          
BLAST of BQ622985 vs. ExPASy Swiss-Prot
Match: CADH7_PICAB (Probable cinnamyl alcohol dehydrogenase 7/8 OS=Picea abies GN=CAD7 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.445e-18
Identity = 43/108 (39.81%), Postives = 70/108 (64.81%), Query Frame = 3
Query:    3 DFIIDTASGDHPFDAYMSLLKVAGVYVLVGF-PSEVKFSPASLNIGAKTVSGSVTGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNS 323
            D+I+DT    HP + Y++LLK  G  V++G  P  + F    L +G ++++GS  G  ++TQE L++CA  K+   IE + ++ +N A+ERL+K DV+YRFV+D+  S
Sbjct:  246 DYIMDTIPVAHPLEPYLALLKTNGKLVMLGVVPEPLHFVTPLLILGRRSIAGSFIGSMEETQETLDFCAEKKVSSMIEVVGLDYINTAMERLVKNDVRYRFVVDVAAS 353          
BLAST of BQ622985 vs. ExPASy Swiss-Prot
Match: CADH_POPDE (Probable cinnamyl alcohol dehydrogenase OS=Populus deltoides PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 2.465e-18
Identity = 45/108 (41.67%), Postives = 69/108 (63.89%), Query Frame = 3
Query:    3 DFIIDTASGDHPFDAYMSLLKVAGVYVLVG-FPSEVKFSPASLNIGAKTVSGSVTGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNS 323
            D+IIDT    HP + Y+SLLK+ G  +L+G   + ++F    + +G K+++GS  G  K+T+EMLE+C    +   IE I ++ +N A ERL K DV+YRFV+D+  S
Sbjct:  246 DYIIDTVPVVHPLEPYLSLLKLDGKLILMGVINAPLQFVTPMVMLGRKSITGSFIGSMKETEEMLEFCKEKGVASMIEVIKMDYINTAFERLEKNDVRYRFVVDVAGS 353          
BLAST of BQ622985 vs. ExPASy Swiss-Prot
Match: CADH_EUCBO (Probable cinnamyl alcohol dehydrogenase OS=Eucalyptus botryoides GN=CAD1 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.465e-18
Identity = 46/108 (42.59%), Postives = 69/108 (63.89%), Query Frame = 3
Query:    3 DFIIDTASGDHPFDAYMSLLKVAGVYVLVG-FPSEVKFSPASLNIGAKTVSGSVTGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNS 323
            D+I DT    HP + Y++LLK+ G  +L G   + ++F    + +G K+++GS  G  K+T+EMLE+C    +  QIE I ++ VN ALERL K DV+YRFV+D+  S
Sbjct:  245 DYIFDTIPVVHPLEPYLALLKLDGKLILTGVINAPLQFISPMVMLGRKSITGSFIGSMKETEEMLEFCKEKGLTSQIEVIKMDYVNTALERLEKNDVRYRFVVDVAGS 352          
BLAST of BQ622985 vs. ExPASy Swiss-Prot
Match: CADH_EUCGL (Probable cinnamyl alcohol dehydrogenase OS=Eucalyptus globulus GN=CAD PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.220e-18
Identity = 46/108 (42.59%), Postives = 69/108 (63.89%), Query Frame = 3
Query:    3 DFIIDTASGDHPFDAYMSLLKVAGVYVLVG-FPSEVKFSPASLNIGAKTVSGSVTGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNS 323
            D+I DT    HP + Y++LLK+ G  +L G   + ++F    + +G K+++GS  G  K+T+EMLE+C    +  QIE I ++ VN ALERL K DV+YRFV+D+  S
Sbjct:  246 DYIFDTIPVVHPLEPYLALLKLDGKLILTGVINAPLQFISPMVMLGRKSITGSFIGSMKETEEMLEFCKEKGLTSQIEVIKMDYVNTALERLEKNDVRYRFVVDVVGS 353          
BLAST of BQ622985 vs. ExPASy Swiss-Prot
Match: CADH2_EUCGU (Probable cinnamyl alcohol dehydrogenase 2 OS=Eucalyptus gunnii GN=CAD2 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.220e-18
Identity = 46/108 (42.59%), Postives = 69/108 (63.89%), Query Frame = 3
Query:    3 DFIIDTASGDHPFDAYMSLLKVAGVYVLVG-FPSEVKFSPASLNIGAKTVSGSVTGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNS 323
            D+I DT    HP + Y++LLK+ G  +L G   + ++F    + +G K+++GS  G  K+T+EMLE+C    +  QIE I ++ VN ALERL K DV+YRFV+D+  S
Sbjct:  246 DYIFDTIPVVHPLEPYLALLKLDGKLILTGVINAPLQFISPMVMLGRKSITGSFIGSMKETEEMLEFCKEKGLTSQIEVIKMDYVNTALERLEKNDVRYRFVVDVVGS 353          
BLAST of BQ622985 vs. ExPASy Swiss-Prot
Match: CADH_PINRA (Probable cinnamyl alcohol dehydrogenase OS=Pinus radiata GN=CAD PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.205e-18
Identity = 43/108 (39.81%), Postives = 69/108 (63.89%), Query Frame = 3
Query:    3 DFIIDTASGDHPFDAYMSLLKVAGVYVLVGF-PSEVKFSPASLNIGAKTVSGSVTGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNS 323
            D+I+DT    HP + Y++LLK  G  V++G  P  + F    L +G ++++GS  G  ++TQE L++CA  K+   IE + ++ +N A+ERL K DV+YRFV+D+  S
Sbjct:  246 DYIMDTIPVAHPLEPYLALLKTNGKLVMLGVVPEPLHFVTPLLILGRRSIAGSFIGSMEETQETLDFCAEKKVSSMIEVVGLDYINTAMERLEKNDVRYRFVVDVAGS 353          
BLAST of BQ622985 vs. ExPASy Swiss-Prot
Match: CADH_LOLPR (Probable cinnamyl alcohol dehydrogenase OS=Lolium perenne PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.205e-18
Identity = 44/108 (40.74%), Postives = 70/108 (64.81%), Query Frame = 3
Query:    3 DFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSE-VKFSPASLNIGAKTVSGSVTGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNS 323
            D+IIDT    HP + Y++LLK+ G  VL+G   E + F    + +G KT++GS  G  ++T+E+L +C    +  QIE + ++ +N+ALERL + DV+YRFV+D+  S
Sbjct:  247 DYIIDTVPVKHPLEPYLALLKMDGKLVLMGVIGEPLSFVSPMVMLGRKTITGSFIGSIEETEEVLRFCVDKGLTSQIEVVKMDYLNQALERLERNDVRYRFVVDVAGS 354          
The following BLAST results are available for this feature:
BLAST of BQ622985 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
CADH2_PICAB8.473e-1939.81Probable cinnamyl alcohol dehydrogenase 2 OS=Picea... [more]
CADH1_TOBAC8.473e-1940.74Probable cinnamyl alcohol dehydrogenase 1 OS=Nicot... [more]
YAHK_ECOLI1.107e-1845.71Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
CADH7_PICAB1.445e-1839.81Probable cinnamyl alcohol dehydrogenase 7/8 OS=Pic... [more]
CADH_POPDE2.465e-1841.67Probable cinnamyl alcohol dehydrogenase OS=Populus... [more]
CADH_EUCBO2.465e-1842.59Probable cinnamyl alcohol dehydrogenase OS=Eucalyp... [more]
CADH_EUCGL3.220e-1842.59Probable cinnamyl alcohol dehydrogenase OS=Eucalyp... [more]
CADH2_EUCGU3.220e-1842.59Probable cinnamyl alcohol dehydrogenase 2 OS=Eucal... [more]
CADH_PINRA4.205e-1839.81Probable cinnamyl alcohol dehydrogenase OS=Pinus r... [more]
CADH_LOLPR4.205e-1840.74Probable cinnamyl alcohol dehydrogenase OS=Lolium ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00076 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00076 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622985 ID=BQ622985; Name=BQ622985; organism=Citrus sinensis; type=EST; length=616bp
TGGATTTCATCATCGACACAGCATCTGGTGATCATCCATTTGATGCGTAC
ATGTCACTGTTGAAGGTTGCTGGCGTTTATGTCCTAGTAGGATTTCCCAG
CGAAGTTAAATTTAGTCCCGCTAGTCTCAATATTGGTGCAAAAACTGTTA
GCGGTAGTGTAACAGGTGGTACCAAGGACACGCAAGAAATGTTGGAGTAT
TGTGCTGCTCATAAGATTTACCCGCAGATAGAAACAATTCCAATTGAGAA
TGTGAATGAAGCTCTTGAGAGGCTGATAAAGAGGGATGTAAAGTATCGAT
TTGTGATTGATATTCAGAACTCCTTGAAATAACATGGAGGCCAACCTCAC
TTTATAGCCACATATTGGAGAAGAGAGATCATATCCTTGTTCTCTGATTG
GCGATTCTTGATACAATAAACCTCTAAATCCTGCTAGTCATGCTTATGCT
GATAATTTTATGCTAATTAAGCATCACTACTTGTTCTTTCCTTTCTTAGT
TTTTGATTGTTTTGGGGAGACAATATGTTTAAGTACATATCTTTTACCTT
GAAGACAATGTCTTTCAAATAATCTTTAAGTAGAATAAATTTGAGTAAAA
AAAAAAAAAAAAAAAA
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