BQ622985

Overview
NameBQ622985
Unique NameBQ622985
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length616
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ622985 vs. ExPASy Swiss-Prot
Match: CADH6_ARATH (Probable cinnamyl alcohol dehydrogenase 6 OS=Arabidopsis thaliana GN=CAD6 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 5.492e-18
Identity = 50/109 (45.87%), Postives = 69/109 (63.30%), Query Frame = 3
Query:    3 DFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSE-VKFSPASLNIGAKTVSGSVTGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSL 326
            D IIDT S  H     + LLK  G  VL+G   +    S  SL +G K+++GS  GG ++TQEM+++ A H I  +IE I ++ VN A++RL K DV+YRFVIDI N+L
Sbjct:  250 DGIIDTVSASHSISPLIGLLKSNGKLVLLGATEKPFDISAFSLILGRKSIAGSGIGGMQETQEMIDFAAEHGIKAEIEIISMDYVNTAMDRLAKGDVRYRFVIDISNTL 358          
BLAST of BQ622985 vs. ExPASy Swiss-Prot
Match: CADH_MEDSA (Probable cinnamyl alcohol dehydrogenase OS=Medicago sativa GN=CAD2 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 7.173e-18
Identity = 43/108 (39.81%), Postives = 70/108 (64.81%), Query Frame = 3
Query:    3 DFIIDTASGDHPFDAYMSLLKVAGVYVLVG-FPSEVKFSPASLNIGAKTVSGSVTGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNS 323
            D+IIDT    HP + Y+SLLK+ G  +L+G   + ++F    + +G K+++GS  G  K+T+EMLE+     +   IE + ++ +N+A ERL K DV+YRFV+D++ S
Sbjct:  247 DYIIDTVPVGHPLEPYLSLLKIDGKLILMGVINTPLQFVTPMVMLGRKSITGSFVGSVKETEEMLEFWKEKGLTSMIEIVTMDYINKAFERLEKNDVRYRFVVDVKGS 354          
BLAST of BQ622985 vs. ExPASy Swiss-Prot
Match: CADH1_ARACO (Probable cinnamyl alcohol dehydrogenase 1 OS=Aralia cordata GN=CAD1 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.224e-17
Identity = 44/108 (40.74%), Postives = 68/108 (62.96%), Query Frame = 3
Query:    3 DFIIDTASGDHPFDAYMSLLKVAGVYVLVG-FPSEVKFSPASLNIGAKTVSGSVTGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNS 323
            D+IIDT    HP + Y+SLLK+ G  +L+G   + ++F    + +G K ++GS  G  K+T+EML++C    I   IE + ++ +N A ERL K DV+YRFV+D+  S
Sbjct:  247 DYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFISPMVMLGRKAITGSFIGSMKETEEMLDFCNEKGITSTIEVVKMDYINTAFERLEKNDVRYRFVVDVAGS 354          
BLAST of BQ622985 vs. ExPASy Swiss-Prot
Match: CADH5_ARATH (Cinnamyl alcohol dehydrogenase 5 OS=Arabidopsis thaliana GN=CAD5 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.598e-17
Identity = 44/108 (40.74%), Postives = 68/108 (62.96%), Query Frame = 3
Query:    3 DFIIDTASGDHPFDAYMSLLKVAGVYVLVG-FPSEVKFSPASLNIGAKTVSGSVTGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNS 323
            D++IDT    H  + Y+SLLK+ G  +L+G   + ++F    L +G K ++GS  G  K+T+EMLE+C    +   IE + ++ VN A ERL K DV+YRFV+D++ S
Sbjct:  246 DYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPLLMLGRKVITGSFIGSMKETEEMLEFCKEKGLSSIIEVVKMDYVNTAFERLEKNDVRYRFVVDVEGS 353          
BLAST of BQ622985 vs. ExPASy Swiss-Prot
Match: CADH_SACOF (Probable cinnamyl alcohol dehydrogenase OS=Saccharum officinarum GN=CAD PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.087e-17
Identity = 44/108 (40.74%), Postives = 68/108 (62.96%), Query Frame = 3
Query:    3 DFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSE-VKFSPASLNIGAKTVSGSVTGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNS 323
            D+IIDT    HP + Y++LLK+ G +VL+G   E + F    + +G K ++GS  G   +T E+L++C    +  QIE + +  VNEAL+RL + DV+YRFV+D+  S
Sbjct:  246 DYIIDTVPVHHPLEPYLALLKLDGKHVLLGVIGEPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALDRLERNDVRYRFVVDVAGS 353          
BLAST of BQ622985 vs. ExPASy Swiss-Prot
Match: CADH_MAIZE (Probable cinnamyl alcohol dehydrogenase OS=Zea mays GN=CAD PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.087e-17
Identity = 45/108 (41.67%), Postives = 67/108 (62.04%), Query Frame = 3
Query:    3 DFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSE-VKFSPASLNIGAKTVSGSVTGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNS 323
            D+IIDT    HP + Y++LLK+ G  VL+G   E + F    + +G K ++GS  G   +T E+L++C    +  QIE + +  VNEALERL + DV+YRFV+D+  S
Sbjct:  246 DYIIDTVPVHHPLEPYLALLKLDGKLVLLGVIGEPLSFVSPMVMLGRKAITGSFIGSIDETAEVLQFCVDKGLTSQIEVVKMGYVNEALERLERNDVRYRFVVDVAGS 353          
BLAST of BQ622985 vs. ExPASy Swiss-Prot
Match: CADH9_ORYSJ (Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza sativa subsp. japonica GN=CAD9 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.087e-17
Identity = 47/109 (43.12%), Postives = 70/109 (64.22%), Query Frame = 3
Query:    3 DFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSE-VKFSPASLNIGAKTVSGSVTGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSL 326
            D IIDT S  H     ++LL+  G  V VG P + V+ +   L    K+V+GS+ GG +DTQEM+++   H +  ++E I +E+VN A+ERL K DV+YRFVID+ N++
Sbjct:  250 DGIIDTVSAVHDLTPLITLLRTHGQLVPVGSPGKPVQLALYPLQSDGKSVAGSMIGGMRDTQEMVDFAVEHGVAAEVEVIGMEDVNGAMERLQKGDVRYRFVIDVANTM 358          
BLAST of BQ622985 vs. ExPASy Swiss-Prot
Match: CADH2_ORYSJ (Cinnamyl alcohol dehydrogenase 2 OS=Oryza sativa subsp. japonica GN=CAD2 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.726e-17
Identity = 42/108 (38.89%), Postives = 69/108 (63.89%), Query Frame = 3
Query:    3 DFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSE-VKFSPASLNIGAKTVSGSVTGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNS 323
            D+IIDT    HP + Y++LLK+ G  +L+G  ++ + F    + +G K ++GS  G   +T+E+L +C    +  QIE + ++ VN+ALERL + DV+YRFV+D+  S
Sbjct:  246 DYIIDTVPVHHPLEPYLALLKLDGKLILMGVINQPLSFISPMVMLGRKAITGSFIGSMAETEEVLNFCVDKGLTSQIEVVKMDYVNQALERLERNDVRYRFVVDVAGS 353          
BLAST of BQ622985 vs. ExPASy Swiss-Prot
Match: CADH4_ARATH (Cinnamyl alcohol dehydrogenase 4 OS=Arabidopsis thaliana GN=CAD4 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.649e-17
Identity = 44/108 (40.74%), Postives = 67/108 (62.04%), Query Frame = 3
Query:    3 DFIIDTASGDHPFDAYMSLLKVAGVYVLVG-FPSEVKFSPASLNIGAKTVSGSVTGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNS 323
            D+IIDT    HP D Y++ LK+ G  +L+G   + ++F    + +G K +SGS  G  K+T+E+L +C    +   IET+ I+ +N A ERL K DV+YRFV+D+  S
Sbjct:  247 DYIIDTVPVFHPLDPYLACLKLDGKLILMGVINTPLQFVTPLVILGRKVISGSFIGSIKETEEVLAFCKEKGLTSTIETVKIDELNIAFERLRKNDVRYRFVVDVAGS 354          
BLAST of BQ622985 vs. ExPASy Swiss-Prot
Match: CADH1_OCIBA (Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilicum GN=CAD1 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.649e-17
Identity = 43/108 (39.81%), Postives = 67/108 (62.04%), Query Frame = 3
Query:    3 DFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSE-VKFSPASLNIGAKTVSGSVTGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNS 323
            D+IIDT    HP + Y+SLLK+ G  +L+G  +  ++F    + +G K+++GS  G  K+  EMLE+C    +   IE + ++ +N A ERL K DV+YRFV+D+  S
Sbjct:  246 DYIIDTVPVFHPLEPYLSLLKIDGKLILMGVVNTPLQFVSPMVMLGRKSITGSFIGSMKELAEMLEFCKEKDLSSTIEIVKMDYINTAFERLEKNDVRYRFVVDVAGS 353          
The following BLAST results are available for this feature:
BLAST of BQ622985 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
CADH6_ARATH5.492e-1845.87Probable cinnamyl alcohol dehydrogenase 6 OS=Arabi... [more]
CADH_MEDSA7.173e-1839.81Probable cinnamyl alcohol dehydrogenase OS=Medicag... [more]
CADH1_ARACO1.224e-1740.74Probable cinnamyl alcohol dehydrogenase 1 OS=Arali... [more]
CADH5_ARATH1.598e-1740.74Cinnamyl alcohol dehydrogenase 5 OS=Arabidopsis th... [more]
CADH_SACOF2.087e-1740.74Probable cinnamyl alcohol dehydrogenase OS=Sacchar... [more]
CADH_MAIZE2.087e-1741.67Probable cinnamyl alcohol dehydrogenase OS=Zea may... [more]
CADH9_ORYSJ2.087e-1743.12Probable cinnamyl alcohol dehydrogenase 9 OS=Oryza... [more]
CADH2_ORYSJ2.726e-1738.89Cinnamyl alcohol dehydrogenase 2 OS=Oryza sativa s... [more]
CADH4_ARATH4.649e-1740.74Cinnamyl alcohol dehydrogenase 4 OS=Arabidopsis th... [more]
CADH1_OCIBA4.649e-1739.81Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilic... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00076 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00076 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622985 ID=BQ622985; Name=BQ622985; organism=Citrus sinensis; type=EST; length=616bp
TGGATTTCATCATCGACACAGCATCTGGTGATCATCCATTTGATGCGTAC
ATGTCACTGTTGAAGGTTGCTGGCGTTTATGTCCTAGTAGGATTTCCCAG
CGAAGTTAAATTTAGTCCCGCTAGTCTCAATATTGGTGCAAAAACTGTTA
GCGGTAGTGTAACAGGTGGTACCAAGGACACGCAAGAAATGTTGGAGTAT
TGTGCTGCTCATAAGATTTACCCGCAGATAGAAACAATTCCAATTGAGAA
TGTGAATGAAGCTCTTGAGAGGCTGATAAAGAGGGATGTAAAGTATCGAT
TTGTGATTGATATTCAGAACTCCTTGAAATAACATGGAGGCCAACCTCAC
TTTATAGCCACATATTGGAGAAGAGAGATCATATCCTTGTTCTCTGATTG
GCGATTCTTGATACAATAAACCTCTAAATCCTGCTAGTCATGCTTATGCT
GATAATTTTATGCTAATTAAGCATCACTACTTGTTCTTTCCTTTCTTAGT
TTTTGATTGTTTTGGGGAGACAATATGTTTAAGTACATATCTTTTACCTT
GAAGACAATGTCTTTCAAATAATCTTTAAGTAGAATAAATTTGAGTAAAA
AAAAAAAAAAAAAAAA
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