BQ622985

Overview
NameBQ622985
Unique NameBQ622985
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length616
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ622985 vs. ExPASy Swiss-Prot
Match: CADH7_ORYSJ (Cinnamyl alcohol dehydrogenase 7 OS=Oryza sativa subsp. japonica GN=CAD7 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 7.931e-17
Identity = 47/108 (43.52%), Postives = 67/108 (62.04%), Query Frame = 3
Query:    9 IIDTASGDHPFDAYMSLLKVAGVYVLVGFPSEVKFSPA-SLNIGAKTVSGSVTGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSLK 329
            II+TAS      +Y++LLK  G  +LVG P +    P  +L  G K ++GS  G   +TQEM+++ A H +   IE I  + VN A+ERL K DV+YRFV+DI N+L+
Sbjct:  270 IINTASASTSMHSYLALLKPKGKMILVGLPEKPLQIPTFALVGGGKILAGSCMGSISETQEMIDFAAEHGVAADIELIGADEVNTAMERLAKGDVRYRFVVDIGNTLR 377          
BLAST of BQ622985 vs. ExPASy Swiss-Prot
Match: CADH8_ARATH (Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis thaliana GN=CAD8 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.036e-16
Identity = 51/110 (46.36%), Postives = 63/110 (57.27%), Query Frame = 3
Query:    3 DFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSEVKFSPAS-LNIGAKTVSGSVTGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSLK 329
            D IIDT S  H     + LLK  G  V+VG P +    P   L    K V GS+ GG K+TQEM++    H I   IE I  + VN A+ERL K DV+YRFVID+ N+LK
Sbjct:  245 DGIIDTVSATHSLLPLLGLLKHKGKLVMVGAPEKPLELPVMPLIFERKMVMGSMIGGIKETQEMIDMAGKHNITADIELISADYVNTAMERLEKADVRYRFVIDVANTLK 354          
BLAST of BQ622985 vs. ExPASy Swiss-Prot
Match: CADH5_ORYSJ (Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza sativa subsp. japonica GN=CAD5 PE=3 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 1.767e-16
Identity = 50/110 (45.45%), Postives = 68/110 (61.82%), Query Frame = 3
Query:    3 DFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSE-VKFSPASLNIGAKTVSGSVTGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSLK 329
            D II+T S + P    + LLK  G  +LVG P + ++  P +L    KT++GS  GG  DT EM++  A H +  +IE I  + VN A+ERL K DV+YRFVIDI N+LK
Sbjct:  242 DGIINTVSANIPIAPLLGLLKPNGKMILVGLPEKPMEIPPFALVASNKTLAGSCIGGMADT-EMIDLAAKHGVTAEIEVIGADYVNTAMERLAKADVRYRFVIDIGNTLK 350          
BLAST of BQ622985 vs. ExPASy Swiss-Prot
Match: ADHC_MYCTU (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium tuberculosis GN=adhC PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.936e-16
Identity = 44/105 (41.90%), Postives = 66/105 (62.86%), Query Frame = 3
Query:    3 DFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSEVKFSPA-SLNIGAKTVSGSVTGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDI 314
            D I++T S +     Y++LL V G  V +G P      PA +L +  ++++GS  GG  +TQEML +CA H + P+IE I  + +N+A ER++  DV+YRFVIDI
Sbjct:  239 DLILNTVSANLDLGQYLNLLDVDGTLVELGIPEHPMAVPAFALALMRRSLAGSNIGGIAETQEMLNFCAEHGVTPEIELIEPDYINDAYERVLASDVRYRFVIDI 343          
BLAST of BQ622985 vs. ExPASy Swiss-Prot
Match: ADHC_MYCBO (NADP-dependent alcohol dehydrogenase C OS=Mycobacterium bovis GN=adhC PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.936e-16
Identity = 44/105 (41.90%), Postives = 66/105 (62.86%), Query Frame = 3
Query:    3 DFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSEVKFSPA-SLNIGAKTVSGSVTGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDI 314
            D I++T S +     Y++LL V G  V +G P      PA +L +  ++++GS  GG  +TQEML +CA H + P+IE I  + +N+A ER++  DV+YRFVIDI
Sbjct:  239 DLILNTVSANLDLGQYLNLLDVDGTLVELGIPEHPMAVPAFALALMRRSLAGSNIGGIAETQEMLNFCAEHGVTPEIELIEPDYINDAYERVLASDVRYRFVIDI 343          
BLAST of BQ622985 vs. ExPASy Swiss-Prot
Match: CADH1_EUCGU (Probable cinnamyl alcohol dehydrogenase 1 OS=Eucalyptus gunnii GN=CAD1 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.145e-15
Identity = 44/108 (40.74%), Postives = 68/108 (62.96%), Query Frame = 3
Query:    3 DFIIDTASGDHPFDAYMSLLKVAGVYVLVG-FPSEVKFSPASLNIGAKTVSGSVTGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNS 323
            D++ DT    HP + Y++LLK+ G  +L G   + ++F   S  +  ++++GS  G  K+T+EMLE+C    +  QIE I ++ VN ALERL K DV+YRFV+D+  S
Sbjct:  246 DYVFDTIPVVHPLEPYLALLKLDGKLILTGVINAPLQF--ISPMVMLESITGSFIGSMKETEEMLEFCKEKGLTSQIEVIKMDYVNTALERLEKNDVRYRFVVDVVGS 351          
BLAST of BQ622985 vs. ExPASy Swiss-Prot
Match: CAD8C_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8C OS=Oryza sativa subsp. japonica GN=CAD8C PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 7.423e-15
Identity = 44/108 (40.74%), Postives = 62/108 (57.41%), Query Frame = 3
Query:    3 DFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSEVKFSPASLNI-GAKTVSGSVTGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNS 323
            D I++T S  HP     SL+K     V VG P+     PA   + G K ++G+  GG +D Q ML++   H I  ++E I ++ VN A+ERL K DV+YRFVID+  S
Sbjct:  322 DGILNTVSAWHPIAPLFSLMKPMAQMVFVGGPTRPLELPAYAIVPGGKGITGNCVGGIRDCQAMLDFAGEHGITAEVEVIKMDYVNTAMERLEKNDVRYRFVIDVAGS 429          
BLAST of BQ622985 vs. ExPASy Swiss-Prot
Match: CAD8A_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8A OS=Oryza sativa subsp. japonica GN=CAD8A PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 9.694e-15
Identity = 47/109 (43.12%), Postives = 62/109 (56.88%), Query Frame = 3
Query:    3 DFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSEVKFSPASLNI-GAKTVSGSVTGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSL 326
            D IIDT S  HP    +SLLK  G  V+VG P+     PA   I G K V+GS  G   + Q ML++   H I   +E + + +VN AL RL + DV+YRFVID+  +L
Sbjct:  244 DGIIDTVSAGHPLVPLLSLLKPKGQMVVVGAPAAPLQLPAIAIIDGGKRVAGSGGGSVAECQAMLDFAGEHGIAADVEVVAMGDVNAALGRLERNDVRYRFVIDVAGTL 352          
BLAST of BQ622985 vs. ExPASy Swiss-Prot
Match: CAD8B_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8B OS=Oryza sativa subsp. japonica GN=CAD8B PE=3 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 1.654e-14
Identity = 43/108 (39.81%), Postives = 62/108 (57.41%), Query Frame = 3
Query:    3 DFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSEVKFSPASLNI-GAKTVSGSVTGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNS 323
            D I++T S  HP     +L+K     V VG P+     PA   + G K ++G+  GG +D Q ML++   H I  ++E I ++ VN A+ERL K DV+YRFVID+  S
Sbjct:  319 DGILNTVSAWHPVAPLFALMKPMAQMVFVGAPTRPLELPAYAIVPGGKGITGNCVGGIRDCQAMLDFAGEHGITAEVEVIKMDYVNTAMERLEKNDVRYRFVIDVAGS 426          
BLAST of BQ622985 vs. ExPASy Swiss-Prot
Match: CAD8D_ORYSJ (Probable cinnamyl alcohol dehydrogenase 8D OS=Oryza sativa subsp. japonica GN=CAD8D PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.821e-14
Identity = 44/109 (40.37%), Postives = 62/109 (56.88%), Query Frame = 3
Query:    3 DFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSEVKFSPASLNI-GAKTVSGSVTGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSL 326
            D IIDT S  HP    +SLLK  G  V+VG P+     PA   I G K V+G+  G   + Q ML++   H I   +E + ++ VN AL RL + DV+YRFV+D+  ++
Sbjct:  244 DGIIDTVSAGHPLVPLLSLLKPKGQMVVVGAPAMPLQLPAYAIIEGGKRVAGNGVGSVAECQAMLDFAGEHGIAADVEVVAMDAVNAALGRLERNDVRYRFVVDVAGTM 352          
The following BLAST results are available for this feature:
BLAST of BQ622985 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
CADH7_ORYSJ7.931e-1743.52Cinnamyl alcohol dehydrogenase 7 OS=Oryza sativa s... [more]
CADH8_ARATH1.036e-1646.36Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis th... [more]
CADH5_ORYSJ1.767e-1645.45Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza... [more]
ADHC_MYCTU3.936e-1641.90NADP-dependent alcohol dehydrogenase C OS=Mycobact... [more]
ADHC_MYCBO3.936e-1641.90NADP-dependent alcohol dehydrogenase C OS=Mycobact... [more]
CADH1_EUCGU1.145e-1540.74Probable cinnamyl alcohol dehydrogenase 1 OS=Eucal... [more]
CAD8C_ORYSJ7.423e-1540.74Probable cinnamyl alcohol dehydrogenase 8C OS=Oryz... [more]
CAD8A_ORYSJ9.694e-1543.12Probable cinnamyl alcohol dehydrogenase 8A OS=Oryz... [more]
CAD8B_ORYSJ1.654e-1439.81Probable cinnamyl alcohol dehydrogenase 8B OS=Oryz... [more]
CAD8D_ORYSJ2.821e-1440.37Probable cinnamyl alcohol dehydrogenase 8D OS=Oryz... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00076 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00076 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622985 ID=BQ622985; Name=BQ622985; organism=Citrus sinensis; type=EST; length=616bp
TGGATTTCATCATCGACACAGCATCTGGTGATCATCCATTTGATGCGTAC
ATGTCACTGTTGAAGGTTGCTGGCGTTTATGTCCTAGTAGGATTTCCCAG
CGAAGTTAAATTTAGTCCCGCTAGTCTCAATATTGGTGCAAAAACTGTTA
GCGGTAGTGTAACAGGTGGTACCAAGGACACGCAAGAAATGTTGGAGTAT
TGTGCTGCTCATAAGATTTACCCGCAGATAGAAACAATTCCAATTGAGAA
TGTGAATGAAGCTCTTGAGAGGCTGATAAAGAGGGATGTAAAGTATCGAT
TTGTGATTGATATTCAGAACTCCTTGAAATAACATGGAGGCCAACCTCAC
TTTATAGCCACATATTGGAGAAGAGAGATCATATCCTTGTTCTCTGATTG
GCGATTCTTGATACAATAAACCTCTAAATCCTGCTAGTCATGCTTATGCT
GATAATTTTATGCTAATTAAGCATCACTACTTGTTCTTTCCTTTCTTAGT
TTTTGATTGTTTTGGGGAGACAATATGTTTAAGTACATATCTTTTACCTT
GAAGACAATGTCTTTCAAATAATCTTTAAGTAGAATAAATTTGAGTAAAA
AAAAAAAAAAAAAAAA
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