BQ622986

Overview
NameBQ622986
Unique NameBQ622986
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length527
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13853 contig Csv1_Contig13853:464..990. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ622986 vs. ExPASy Swiss-Prot
Match: FER_SCOJA (Ferredoxin OS=Scopolia japonica PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 7.009e-31
Identity = 60/96 (62.50%), Postives = 80/96 (83.33%), Query Frame = 1
Query:  151 AVYKIKLIGPNGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 438
            A YK+KL+ P+G   EF+  +D YILD AEE G +LPYSCRAG+CS+CAGK+ +G+VDQSDG+FLDD+QM  G++LTC++YP SD +I++HKEEEL
Sbjct:    1 ATYKVKLVTPDGPV-EFDCPDDVYILDQAEEEGHELPYSCRAGSCSSCAGKVSAGTVDQSDGNFLDDDQMADGFVLTCVAYPQSDVIIETHKEEEL 95          
BLAST of BQ622986 vs. ExPASy Swiss-Prot
Match: FER_LEUGL (Ferredoxin OS=Leucaena glauca PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 7.009e-31
Identity = 61/94 (64.89%), Postives = 78/94 (82.98%), Query Frame = 1
Query:  157 YKIKLIGPNGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 438
            +K+KL+ P+G + EFE  +D YILD AEE G++LPYSCRAG+CS+CAGKLV G +DQSD SFLDD Q+E G++LTC +YP SD VI++HKEEEL
Sbjct:    2 FKVKLLTPDGPK-EFECPDDVYILDQAEELGIELPYSCRAGSCSSCAGKLVEGDLDQSDQSFLDDEQIEEGWVLTCAAYPRSDVVIETHKEEEL 94          
BLAST of BQ622986 vs. ExPASy Swiss-Prot
Match: FER_CAPAA (Ferredoxin OS=Capsicum annuum var. annuum PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 7.009e-31
Identity = 61/96 (63.54%), Postives = 79/96 (82.29%), Query Frame = 1
Query:  151 AVYKIKLIGPNGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 438
            A YK+KLI P+G   EF+  +D YILD AEEAG DLPYSCRAG+CS+CAGK+  G+VDQ+DG+FLDD+Q+E G++LTC++YP SD  I++HKE EL
Sbjct:    1 ASYKVKLITPDGPI-EFDCPDDVYILDQAEEAGHDLPYSCRAGSCSSCAGKIAGGAVDQTDGNFLDDDQLEEGWVLTCVAYPQSDVTIETHKEAEL 95          
BLAST of BQ622986 vs. ExPASy Swiss-Prot
Match: FER_PHYPA (Ferredoxin, chloroplastic OS=Physcomitrella patens GN=PETF PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 9.154e-31
Identity = 65/124 (52.42%), Postives = 89/124 (71.77%), Query Frame = 1
Query:   73 PSSLGSVKGISKTFGLKC-SPNFQASMAVYKIKLI-GPNGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 438
            PSS+     ++K FGLK  S      MA YK+  + G  G E+  E  +++Y LDAAE AG+DLPYSCRAGACS+CAG + +G VDQSD SFLDD+Q++ G++LTC++YP SDC+I +H+EE +
Sbjct:   26 PSSVS----VAKAFGLKSRSMGRLTCMATYKVTFLDGETGAENVXECSDEEYXLDAAERAGMDLPYSCRAGACSSCAGIIKAGEVDQSDQSFLDDSQIDDGFVLTCVAYPASDCIIXTHQEENM 145          
BLAST of BQ622986 vs. ExPASy Swiss-Prot
Match: FER_DATAR (Ferredoxin OS=Datura arborea PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 9.154e-31
Identity = 60/96 (62.50%), Postives = 79/96 (82.29%), Query Frame = 1
Query:  151 AVYKIKLIGPNGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 438
            A YK+KL+ P+G   EF+  +D YILD AEE G +LPYSCRAG+CS+CAGK+ +G+VDQSDG+FLDD+QM  G++LTC++YP SD  I++HKEEEL
Sbjct:    1 ATYKVKLVTPDGPV-EFDCPDDVYILDQAEEEGHELPYSCRAGSCSSCAGKVTAGTVDQSDGNFLDDDQMADGFVLTCVAYPQSDVTIETHKEEEL 95          
BLAST of BQ622986 vs. ExPASy Swiss-Prot
Match: FER_DATST (Ferredoxin OS=Datura stramonium PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.196e-30
Identity = 60/96 (62.50%), Postives = 78/96 (81.25%), Query Frame = 1
Query:  151 AVYKIKLIGPNGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 438
            A YK+KL+ P+G   EF   +D YILD AEE G DLPYSCRAG+CS+CAGK+ +G+VDQSDG++LDD+QM  G++LTC++YP SD  I++HKEEEL
Sbjct:    1 ATYKVKLVTPDGPV-EFNCPDDVYILDQAEEEGHDLPYSCRAGSCSSCAGKVTAGTVDQSDGNYLDDDQMADGFVLTCVAYPQSDVTIETHKEEEL 95          
BLAST of BQ622986 vs. ExPASy Swiss-Prot
Match: FER_DATQU (Ferredoxin OS=Datura quercifolia PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.196e-30
Identity = 60/96 (62.50%), Postives = 78/96 (81.25%), Query Frame = 1
Query:  151 AVYKIKLIGPNGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 438
            A YK+KL+ P+G   EF   +D YILD AEE G DLPYSCRAG+CS+CAGK+ +G+VDQSDG++LDD+QM  G++LTC++YP SD  I++HKEEEL
Sbjct:    1 ATYKVKLVTPDGPV-EFNCPDDVYILDQAEEEGHDLPYSCRAGSCSSCAGKVTAGTVDQSDGNYLDDDQMADGFVLTCVAYPQSDVTIETHKEEEL 95          
BLAST of BQ622986 vs. ExPASy Swiss-Prot
Match: FER1_ORYSJ (Ferredoxin-1, chloroplastic OS=Oryza sativa subsp. japonica GN=ADI1 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.196e-30
Identity = 61/96 (63.54%), Postives = 79/96 (82.29%), Query Frame = 1
Query:  151 AVYKIKLIGPNGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 438
            A Y +KLI P+GE  E +  +D YILD AEE G+DLPYSCRAG+CS+CAGK+VSG +DQSD SFLDD+Q+ AG++LTC +YP SD VI++HKE++L
Sbjct:   44 ATYNVKLITPDGEV-ELQVPDDVYILDQAEEEGIDLPYSCRAGSCSSCAGKVVSGEIDQSDQSFLDDDQVAAGWVLTCHAYPKSDVVIETHKEDDL 138          
BLAST of BQ622986 vs. ExPASy Swiss-Prot
Match: FER1_ORYSI (Ferredoxin-1, chloroplastic OS=Oryza sativa subsp. indica GN=ADI1 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.196e-30
Identity = 61/96 (63.54%), Postives = 79/96 (82.29%), Query Frame = 1
Query:  151 AVYKIKLIGPNGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 438
            A Y +KLI P+GE  E +  +D YILD AEE G+DLPYSCRAG+CS+CAGK+VSG +DQSD SFLDD+Q+ AG++LTC +YP SD VI++HKE++L
Sbjct:   44 ATYNVKLITPDGEV-ELQVPDDVYILDQAEEEGIDLPYSCRAGSCSSCAGKVVSGEIDQSDQSFLDDDQVAAGWVLTCHAYPKSDVVIETHKEDDL 138          
BLAST of BQ622986 vs. ExPASy Swiss-Prot
Match: FER_PHYAF (Ferredoxin OS=Physalis alkekengi var. francheti PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.561e-30
Identity = 60/96 (62.50%), Postives = 80/96 (83.33%), Query Frame = 1
Query:  151 AVYKIKLIGPNGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 438
            A YK+KLI P+G    F+  +++YILDAAEE G DLPYSCRAG+CS+CAGK+ +G+VDQSDG+FLDD+Q+  G++LTC++YP SD  I++HKEEEL
Sbjct:    1 ATYKVKLITPDGPV-VFDCPDNEYILDAAEEQGHDLPYSCRAGSCSSCAGKVTAGTVDQSDGNFLDDDQVADGFVLTCVAYPQSDVTIETHKEEEL 95          
The following BLAST results are available for this feature:
BLAST of BQ622986 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
FER_SCOJA7.009e-3162.50Ferredoxin OS=Scopolia japonica PE=1 SV=1[more]
FER_LEUGL7.009e-3164.89Ferredoxin OS=Leucaena glauca PE=1 SV=1[more]
FER_CAPAA7.009e-3163.54Ferredoxin OS=Capsicum annuum var. annuum PE=1 SV=... [more]
FER_PHYPA9.154e-3152.42Ferredoxin, chloroplastic OS=Physcomitrella patens... [more]
FER_DATAR9.154e-3162.50Ferredoxin OS=Datura arborea PE=1 SV=1[more]
FER_DATST1.196e-3062.50Ferredoxin OS=Datura stramonium PE=1 SV=1[more]
FER_DATQU1.196e-3062.50Ferredoxin OS=Datura quercifolia PE=1 SV=1[more]
FER1_ORYSJ1.196e-3063.54Ferredoxin-1, chloroplastic OS=Oryza sativa subsp.... [more]
FER1_ORYSI1.196e-3063.54Ferredoxin-1, chloroplastic OS=Oryza sativa subsp.... [more]
FER_PHYAF1.561e-3062.50Ferredoxin OS=Physalis alkekengi var. francheti PE... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00077 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00077 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622986 ID=BQ622986; Name=BQ622986; organism=Citrus sinensis; type=EST; length=527bp
GTGACACTTAGTGCCCCGTGCATGGTTAAAGCTGCACCCAGAAATCAACT
ATCAAGGAACTTAATCAAGAGCCCATCCTCACTTGGGTCTGTTAAGGGCA
TCTCCAAGACCTTTGGCCTGAAATGCTCTCCCAATTTCCAAGCATCAATG
GCTGTCTACAAGATTAAGCTGATTGGACCTAACGGTGAAGAGCATGAGTT
TGAGGCCCAGGAAGACCAGTACATCCTCGATGCAGCTGAGGAAGCAGGAG
TCGACCTGCCCTATTCCTGCCGCGCTGGTGCTTGCTCGACGTGTGCTGGG
AAGTTGGTGTCTGGTTCAGTTGACCAGTCAGATGGTTCCTTCCTCGATGA
CAATCAAATGGAGGCTGGTTATCTGCTGACTTGCATTTCATACCCGACTT
CAGATTGCGTGATTCAGTCTCACAAGGAAGAAGAGCTTTGCTGAGTACTG
TCGGTTGATTTAGGGTTTTTCAAGTATGAACTGTGATCAAGTGCCTGAGT
ATGCCGATAAGGGTTCTCATGGACCTA
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