BQ622989
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ622989 vs. ExPASy Swiss-Prot
Match: EXP18_ORYSJ (Expansin-A18 OS=Oryza sativa subsp. japonica GN=EXPA18 PE=2 SV=2) HSP 1 Score: 191.43 bits (485), Expect = 3.555e-48 Identity = 93/177 (52.54%), Postives = 119/177 (67.23%), Query Frame = 2 Query: 5 SCGSCYEIKCVND--PKWCLPGT-IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQ 526 SCG CY I C D P C GT I VT TNFC GGWCN + HFD+SQP +++I Y AG+VP+ Y++V C R GG+RFTI G +YF LVL+TN+ G+G + ++S+KGS TGW MSRNWG NWQ L GQ+LSF VT++ G+T+ +V PAGWSFG+T+S Q Sbjct: 71 SCGQCYLIICNYDKAPSGCRMGTAITVTGTNFCPPNYDLPY--GGWCNTTRPHFDMSQPAWENIGIYSAGIVPILYQQVKCWRSGGVRFTITGLNYFELVLVTNMAGSGSIASMSVKGSSTGWIQMSRNWGANWQCLAGLAGQALSFTVTSTGGQTIVFDSVVPAGWSFGQTFSTYQ 245
BLAST of BQ622989 vs. ExPASy Swiss-Prot
Match: EXP12_ARATH (Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=2 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 7.920e-48 Identity = 95/182 (52.20%), Postives = 121/182 (66.48%), Query Frame = 2 Query: 5 SCGSCYEIKC--VNDPKWCLPGT-IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQY-RAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSR-TGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYS--GAQF 529 SCG CY+++C DPKWCL G + VTATNFC GWCN P+ HFD+S P F IA+ G+VPV YRRV C RRGG+RFT+ G FN+V+I+NVGG G V +V+++GS+ W M+RNWG NWQS+ L GQ LSF+VT +D +T T NV P+ W FG+T+S G QF Sbjct: 75 SCGGCYQVRCDFPADPKWCLRGAAVTVTATNFCPTNNN-----NGWCNLPRHHFDMSSPAFFRIARRGNEGIVPVFYRRVGCKRRGGVRFTMRGQGNFNMVMISNVGGGGSVRSVAVRGSKGKTWLQMTRNWGANWQSSGDLRGQRLSFKVTLTDSKTQTFLNVVPSSWWFGQTFSSRGRQF 251
BLAST of BQ622989 vs. ExPASy Swiss-Prot
Match: EXP19_ORYSJ (Expansin-A19 OS=Oryza sativa subsp. japonica GN=EXPA19 PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.034e-47 Identity = 88/174 (50.57%), Postives = 117/174 (67.24%), Query Frame = 2 Query: 5 SCGSCYEIKC--VNDPKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYS 517 SCG CY I C P WC G I VT TN+C GGWCN + HFD+SQP +++I Y AG++P+ Y++V C R GG+RFTING +YF LVL+TN+ G+G + ++S+KGS TGW M+RNWG NWQ L GQ+LSF VT++ G+T+ + PAGWSFG+T+S Sbjct: 71 SCGQCYLIICDYSKAPDWCKLGKAITVTGTNYCPPNYDLPY--GGWCNATRPHFDMSQPAWENIGIYNAGIIPILYQQVKCWRYGGVRFTINGFNYFELVLVTNMAGSGSIASMSVKGSCTGWIQMTRNWGANWQCLAGLAGQALSFNVTSTGGQTIVFDDAVPAGWSFGQTFS 242
BLAST of BQ622989 vs. ExPASy Swiss-Prot
Match: EXP18_ARATH (Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=2 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 3.010e-47 Identity = 87/173 (50.29%), Postives = 119/173 (68.79%), Query Frame = 2 Query: 5 SCGSCYEIKCVNDPKWCLPGT--IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGR-TVTSYNVAPAGWSFGRTY 514 +CG C+++KCV+ P C G+ +VTATN C GGWCNPP+ HFDL++P F IA ++AG++PV+YRRV C + GGIRF G+ Y+ LV + NVGG GD+ +++KGSRTGW MS NWG ++Q+ + L GQSLSF +T+ R T+ +YN APA WS G+TY Sbjct: 79 ACGQCFQLKCVSSPN-CYYGSPATVVTATNICPPNYGQASNNGGWCNPPRVHFDLTKPAFMKIANWKAGIIPVSYRRVACKKIGGIRFKFEGNGYWLLVYVMNVGGPGDIKTMAVKGSRTGWINMSHNWGASYQAFSSLYGQSLSFRLTSYTTRQTIYAYNAAPASWSAGKTY 250
BLAST of BQ622989 vs. ExPASy Swiss-Prot
Match: EXP21_ARATH (Expansin-A21 OS=Arabidopsis thaliana GN=EXPA21 PE=2 SV=3) HSP 1 Score: 187.193 bits (474), Expect = 6.705e-47 Identity = 89/172 (51.74%), Postives = 112/172 (65.12%), Query Frame = 2 Query: 5 SCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSG 520 SCG+CYEI C +P+ CL G+I +TAT+ C WC P +HFDLS P+F IAQ +A +VPV YRRVPC + GG++F + G+ +L NVGGAGD+ AVS KGS+T W MSR WGQNW +N L GQS+S VTTSDG T +V PA W FG+T+ G Sbjct: 94 SCGACYEIMCSPNPQGCLSGSIKITATDLCPPG-------SAWCYLPNKHFDLSLPMFIKIAQVKAKMVPVRYRRVPCAKTGGVKFEVKGNPNILTILPYNVGGAGDIIAVSAKGSKTAWVVMSRYWGQNWTTNVNLTGQSVSLRVTTSDGITKDFTDVMPASWGFGQTFDG 258
BLAST of BQ622989 vs. ExPASy Swiss-Prot
Match: EXP20_ORYSJ (Expansin-A20 OS=Oryza sativa subsp. japonica GN=EXPA20 PE=2 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 6.275e-45 Identity = 86/174 (49.43%), Postives = 115/174 (66.09%), Query Frame = 2 Query: 5 SCGSCYEIKCV--NDPKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYS 517 SCG CY I C P WC G I VT TN+ GGWCN + +FD+SQP +++I Y AG+VP+ Y++V C R GG+RF ING +YF LVL+TN+ G+G + ++S+KGS TGW M+RNWG NWQ L GQ+LSF VT++ G+T+ + PAGWSFG+T+S Sbjct: 71 SCGQCYLIICDYGKAPDWCKLGKAITVTGTNY-----------GGWCNATRPYFDMSQPAWENIGIYSAGIVPILYQQVKCWRYGGVRFIINGFNYFELVLVTNMAGSGSIVSMSVKGSCTGWIQMTRNWGANWQCLAGLAGQALSFNVTSTGGQTIVFDDAVPAGWSFGQTFS 233
BLAST of BQ622989 vs. ExPASy Swiss-Prot
Match: EXP30_ORYSJ (Putative expansin-A30 OS=Oryza sativa subsp. japonica GN=EXPA30 PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 4.972e-42 Identity = 85/175 (48.57%), Postives = 112/175 (64.00%), Query Frame = 2 Query: 8 CGSCYEIKCVNDPKWCLPGT--IMVTATNFCXXXXXXXXXXGG--WCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIK-GSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTT-SDGRTVTSYNVAPAGWSFGRTY 514 CG+CY+++CV C G+ I VTATN C GG WCNPP+ HFDLS+P F +A +RAG+VPV YRRVPC R GG+RF + G+ Y+ L + NV GAGDV + +K G GW MS NWG ++Q+ L GQ+LSF+VT+ + G+T+ + V PA W FG TY Sbjct: 86 CGTCYQMRCVGTAS-CYRGSPAITVTATNLCPPNWAEDPDRGGGGWCNPPRAHFDLSKPAFMRMADWRAGIVPVMYRRVPCARAGGLRFALQGNPYWLLAYVMNVAGAGDVGDMWVKAGGGGGWVRMSHNWGASYQAFAQLGGQALSFKVTSYTTGQTILAAGVTPASWCFGLTY 259
BLAST of BQ622989 vs. ExPASy Swiss-Prot
Match: EXP17_ORYSJ (Expansin-A17 OS=Oryza sativa subsp. japonica GN=EXPA17 PE=2 SV=2) HSP 1 Score: 152.14 bits (383), Expect = 2.390e-36 Identity = 76/179 (42.46%), Postives = 106/179 (59.22%), Query Frame = 2 Query: 8 CGSCYEIKCVNDPKWCLPGT--IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTG--WQPMSRNWGQNWQSNTYL-NGQSLSFEVTT--SDGRTVTSYNVAPAGWSFGRTYSGA 523 CG CYE++CV P WC PG+ +++T TN C GGWCNPP+ HFD++ P F +AQ AG+VPV YRRVPC R GG+RF + G+ Y+ L+ + NVGGAGDV ++S+K S G W + NWG +Q L N L+ ++TT + +T+ + W G Y G+ Sbjct: 103 CGQCYELRCVKSP-WCNPGSPSVVITGTNLCPPNWYLPNDDGGWCNPPRHHFDMAPPSFLKLAQRVAGIVPVQYRRVPCQRTGGVRFCLQGNHYWLLLYVMNVGGAGDVSSLSVKTSGGGGAWIQAAHNWGITYQVFAALDNSDGLTVKLTTYSTPQQTIIVSDAISPWWITGLCYQGS 280
BLAST of BQ622989 vs. ExPASy Swiss-Prot
Match: EXP26_ORYSJ (Expansin-A26 OS=Oryza sativa subsp. japonica GN=EXPA26 PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.004e-34 Identity = 73/170 (42.94%), Postives = 105/170 (61.76%), Query Frame = 2 Query: 8 CGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGS-RTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTY 514 CG+CYE+K + T++VTATN +HFDL+ P F IA+ + GVVPV+YR+V C R+GGI++TI G+ +N+V++ NVGGAGDV +++KG+ R W P+ R+WGQ W++ L G+SL+F V T D R TS+ VAP W++ TY Sbjct: 130 CGACYELKGDSGK------TVVVTATNQAPPPVNGMKG---------EHFDLTMPAFLSIAEEKLGVVPVSYRKVACVRQGGIKYTITGNPSYNMVMVKNVGGAGDVVKLTVKGTKRVKWTPLQRSWGQLWKTEANLTGESLTFRVMTGDHRKATSWRVAPRDWTYDNTY 284
BLAST of BQ622989 vs. ExPASy Swiss-Prot
Match: EXB14_ORYSJ (Putative expansin-B14 OS=Oryza sativa subsp. japonica GN=EXPB14 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.192e-19 Identity = 63/189 (33.33%), Postives = 88/189 (46.56%), Query Frame = 2 Query: 8 CGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQ-------YRAGVVPVAYRRVPCGRRG---GIRFTINGHSYFNLVLITNVGGAGDVHAVSI-----KGSRTGWQPMSRNWGQNWQSNTYLNGQS-----LSFEVTTSDGRTVTSYNVAPAGWSFGRTY 514 CGSCY++KC +P C + V T+ C GG C HFDLS F +A+ AG +PV Y RVPC +G R + Y+ VL+ + G GD+ AV + G W M ++WG W+ N+ G + +S +T+ GRT+ + NV PAGW G TY Sbjct: 88 CGSCYQVKCSGNPS-CSGKPVTVVLTDLCP---------GGACLEEPVHFDLSGTAFGAMAKPGQDDQLRNAGKLPVQYARVPCKWQGVDIAFRVDAGSNQYYLAVLVEDEDGDGDLSAVDLMQSGGSGGGGSWAAMQQSWGAVWKYNS---GPAPLQAPMSIRLTSGSGRTLVASNVIPAGWQPGGTY 263 The following BLAST results are available for this feature:
BLAST of BQ622989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 76
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ622989 ID=BQ622989; Name=BQ622989; organism=Citrus sinensis; type=EST; length=671bpback to top |