BQ622989
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ622989 vs. ExPASy Swiss-Prot
Match: EXPB4_ORYSJ (Expansin-B4 OS=Oryza sativa subsp. japonica GN=EXPB4 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.362e-12 Identity = 50/182 (27.47%), Postives = 77/182 (42.31%), Query Frame = 2 Query: 8 CGSCYEIKCVNDPKWC-LPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQ-------YRAGVVPVAYRRVPC---GRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTG-------WQPMSRNWGQNWQSNTYLNGQS-LSFEVTTSDGRTVTSYNVAPAGW 496 CGSCY+I+C D T+++T N+ HFDLS F +A+ +G++ + + RVPC G + G + + VL+ G GDV V + S+T W PM +WG W+ +T Q+ S + G+T+ + NV PA W Sbjct: 106 CGSCYKIRCTKDQSCSGRSETVIITDMNYYPVAPF--------------HFDLSGTAFGRLAKPGLNDKLRHSGIIDIEFTRVPCEFPGLKIGFHVEEYSNPVYFAVLVEYEDGDGDVVQVDLMESKTAHGPPTGRWTPMRESWGSIWRLDTNHRLQAPFSIRIRNESGKTLVANNVIPANW 273
BLAST of BQ622989 vs. ExPASy Swiss-Prot
Match: EXB10_ORYSJ (Expansin-B10 OS=Oryza sativa subsp. japonica GN=EXPB10 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.038e-11 Identity = 55/185 (29.73%), Postives = 85/185 (45.95%), Query Frame = 2 Query: 8 CGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQ-------YRAGVVPVAYRRVPCGRRGGIRFTI-----NGHSYFNLVLITNVGGAGDVHAVSI--KGSRTGWQPMSRNWGQNWQSNT--YLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTY 514 CGSC+E+KC + P+ C +++ T+ HFDLS F +A+ +AG++ + +RRV C G + T + +YF VL+ VGG GDV V + KGS W+P++ +WG W+ +T L G S VTT + + + +V P W Y Sbjct: 92 CGSCFEVKC-SKPEACSDKPVIIHITDMNTEPI------------AAYHFDLSGHAFGAMAKEGKDEELRKAGIIDMQFRRVRCKYPGETKVTFHVEKGSNPNYF-AVLVKYVGGDGDVVKVELKEKGSEE-WKPLNESWGAIWRIDTPKPLKG-PFSLRVTTESDQKLVANDVIPDNWKANALY 260
BLAST of BQ622989 vs. ExPASy Swiss-Prot
Match: EXB12_ORYSJ (Expansin-B12 OS=Oryza sativa subsp. japonica GN=EXPB12 PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 2.661e-11 Identity = 57/186 (30.65%), Postives = 83/186 (44.62%), Query Frame = 2 Query: 8 CGSCYEIKCV-NDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIA------QYR-AGVVPVAYRRVPCGRRG-GIRFTINGHSYFNLV--LITNVGGAGDVHAVSIK----GSRTGWQPMSRNWGQNWQ--SNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTY 514 CGSCY + C N+ +P T+++T G C HFD+S F +A Q R AG++ + Y RV C G G+ F ++ S N + L+ D+ AV I G+ W PM ++WG W+ S + L G S +T S G+ + N PAGW+ G Y Sbjct: 89 CGSCYRVVCAGNEACSGIPVTVVITDQG--PGGPCLEELVDGQCMNEAAHFDMSGTAFGAMARPGQADQLRGAGLLQIQYTRVECEWTGVGLTFVVDSGSNPNYLALLVEYDDNDSDLAAVDIMPIGAGASGSWIPMQQSWGAVWRLNSGSALQG-PFSVRLTFSSGQMFVASNAIPAGWNPGMAY 271
BLAST of BQ622989 vs. ExPASy Swiss-Prot
Match: EXPB9_ORYSJ (Expansin-B9 OS=Oryza sativa subsp. japonica GN=EXPB9 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.475e-11 Identity = 54/190 (28.42%), Postives = 83/190 (43.68%), Query Frame = 2 Query: 8 CGSCYEIKCVNDPKWC--LPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIA-------QYRAGVVPVAYRRVPCGRRGGIRFTIN----GHSYFNLVLITNVGGAGDVHAVSI-KGSRTGWQPMSRNWGQNWQSNTYLNGQS-LSFEVTTSDGRTVTSYNVAPAGWSFGRTY-SGAQF 529 CGSCYE+KC P C P T+ +T N+ HFD S F +A +AG++ + +RRV C GG + T + + + VL+ V GDV + + + W+PM +WG W+ +T ++ S VTT G+++ + +V P W Y S QF Sbjct: 94 CGSCYEVKC-EQPAACSKQPVTVFITDMNYEPI--------------SAYHFDFSGKAFGAMACPGKETELRKAGIIDMQFRRVRCKYPGGQKVTFHVEKGSNPNYLAVLVKFVADDGDVIQMDLQEAGLPAWRPMKLSWGAIWRMDTATPLKAPFSIRVTTESGKSLIAKDVIPVNWMPDAIYVSNVQF 268
BLAST of BQ622989 vs. ExPASy Swiss-Prot
Match: EXPB2_ARATH (Putative expansin-B2 OS=Arabidopsis thaliana GN=EXPB2 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 4.539e-11 Identity = 54/183 (29.51%), Postives = 84/183 (45.90%), Query Frame = 2 Query: 8 CGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIA------QYR-AGVVPVAYRRVPCGRRGG-IRFTINGHSYFN--LVLITNVGGAGDVHAVSIKGSRTG--WQPMSRNWGQNWQSNTYLNGQS-LSFEVTTSD-GRTVTSYNVAPAGWSFGRTY 514 CG+CY++KC + C + V T+ C C HFDLS F +A Q R G + + Y++V C G + F ++ S N VL+ V G G++ + +K + W MS++WG W+ + ++ LS VT+ + G+TV + NV PA W G Y Sbjct: 97 CGACYQVKCTSKSA-CSKNPVTVVITDECPG-----------CVKESVHFDLSGTAFGAMAISGQDSQLRNVGELQILYKKVECNYIGKTVTFQVDKGSNANSFAVLVAYVNGDGEIGRIELKQALDSDKWLSMSQSWGAVWKLDVSSPLRAPLSLRVTSLESGKTVVASNVIPANWQPGAIY 267
BLAST of BQ622989 vs. ExPASy Swiss-Prot
Match: EXB16_ORYSJ (Expansin-B16 OS=Oryza sativa subsp. japonica GN=EXPB16 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.539e-11 Identity = 54/182 (29.67%), Postives = 80/182 (43.96%), Query Frame = 2 Query: 8 CGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIA-------QYRAGVVPVAYRRVPCGRRG-GIRFTIN-GHSYFNLVLITNV-GGAGDVHAVSIKGSRTG-WQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGR-TVTSYNVAPAGWSFGRTYS 517 CG+CY+++C+ D C + V T+ C GG C + HFDLS F +A G + V YRR C G I F +N G + F L L+ G GD+ ++ +K + + WQ M WG W S +TT R T+++ +V P W+ TY+ Sbjct: 95 CGACYKVRCL-DASICSRRAVTVIVTDEC---------PGGVCAFGRTHFDLSGAAFARLAVAGHGGQLQNRGEISVVYRRTACKYGGKNIAFHVNEGSTTFWLSLLVEFEDGDGDIGSMQLKQANSAQWQDMKHIWGATWSLTPGPLVGPFSVRLTTLTTRQTLSAQDVIPKNWTPKATYT 266 The following BLAST results are available for this feature:
BLAST of BQ622989 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 76
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ622989 ID=BQ622989; Name=BQ622989; organism=Citrus sinensis; type=EST; length=671bpback to top |