BQ622990

Overview
NameBQ622990
Unique NameBQ622990
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length613
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ622990 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.803e-19
Identity = 58/172 (33.72%), Postives = 95/172 (55.23%), Query Frame = 2
Query:   50 QFMFAFTYSMALKSAVELRLADIMHSHG--CPITLSQLASRIDSSCPDIS-HLARIMRMLVYKGIFAAHHPS--DGGDETLYGTTHISKWLLHDSE-LSLAPMILVQNNQWLLAPWHYLSQCVKKGGIPFRKAHGSTFWDFASQNPQLNNLFNEAMACTTKITMKAFVSHYK 547
            Q   A    M LK+A+EL L +IM   G    ++ S++AS + +  PD    L RI+R+L    I         DG  E LYG   + K+L  + + +S++P+ L+  ++ L+  W+YL   + +GGIPF KA+G T +++   +P+ N +FN+ M+  + ITMK  +  YK
Sbjct:   25 QLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLPTKNPDAPVMLDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYK 196          
BLAST of BQ622990 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.803e-19
Identity = 54/163 (33.13%), Postives = 99/163 (60.74%), Query Frame = 2
Query:   77 MALKSAVELRLADIMHSHG--CPITLSQLASRIDSSCPDIS-HLARIMRMLVYKGIFAA--HHPSDGGDETLYGTTHISKWLLHDSE-LSLAPMILVQNNQWLLAPWHYLSQCVKKGGIPFRKAHGSTFWDFASQNPQLNNLFNEAMACTTKITMKAFVSHYK 547
            M LKSA+EL L +++   G    ++ S+LA+++ +  P+    L RI+R+L    +     ++ +DGG E LYG   + K+L  +++ +S+AP++L+  ++ L+  W++L   V  GGIPF KA+G T +++   +P+ N +FN+ M+  + ITMK  +  Y+
Sbjct:   21 MVLKSAIELDLLELIAKAGPGAYVSPSELAAQLPTHNPEAPIMLDRILRLLATYSVLDCKLNNLADGGVERLYGLAPVCKFLTKNADGVSMAPLLLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILEVYR 183          
BLAST of BQ622990 vs. ExPASy Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.967e-19
Identity = 64/197 (32.49%), Postives = 104/197 (52.79%), Query Frame = 2
Query:   50 QFMFAFTYSMALKSAVELRLADIM-----HSHGCPITLSQLASRIDSSCPDIS-HLARIMRMLVYKGIFAA--HHPSDGGDETLYGTTHISKWLLHDSE-LSLAPMILVQNNQWLLAPWHYLSQCVKKGGIPFRKAHGSTFWDFASQNPQLNNLFNEAMACTTKITMKAFVSHYKVGWVQ*HTING*CGVGGTGTAL 613
            Q   A    M LK+A+EL + +IM     H  G  I+ +++A+++ ++ PD    L R++R+L    +         DG  E LYG   + K+L  + + +SLAP+ L+  ++ L+  W+YL   +  GGIPF KA+G T +++   +P+ N +FN  M+  + ITMK     Y  G+   +TI      GGTG  L
Sbjct:   27 QLASASVLPMVLKAAIELDVLEIMAKSIPHGSGAYISPAEIAAQLPTTNPDAPVMLDRVLRLLASYSVVTCSLRELPDGKVERLYGLAPVCKFLTKNEDGVSLAPLCLMNQDKVLMESWYYLKDAILDGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMSDHSTITMKKIFEMY-TGFEALNTIVD--VGGGTGAVL 220          
BLAST of BQ622990 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 6.488e-19
Identity = 58/172 (33.72%), Postives = 94/172 (54.65%), Query Frame = 2
Query:   50 QFMFAFTYSMALKSAVELRLADIMHSHG--CPITLSQLASRIDSSCPDIS-HLARIMRMLVYKGIFAAHHPS--DGGDETLYGTTHISKWLLHDSE-LSLAPMILVQNNQWLLAPWHYLSQCVKKGGIPFRKAHGSTFWDFASQNPQLNNLFNEAMACTTKITMKAFVSHYK 547
            Q   A    M LK+A+EL L +IM   G    ++ S++AS + +  PD    L RI+R+L    I         DG  E LYG   + K+L  + + +S++P+ L+  ++ L+  W+YL   +  GGIPF KA+G T +++   +P+ N +FN+ M+  + ITMK  +  YK
Sbjct:   25 QLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLPTKNPDAPVMLDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYK 196          
BLAST of BQ622990 vs. ExPASy Swiss-Prot
Match: COMT3_POPKI (Caffeic acid 3-O-methyltransferase 3 OS=Populus kitakamiensis GN=HOMT3 PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.220e-18
Identity = 56/172 (32.56%), Postives = 95/172 (55.23%), Query Frame = 2
Query:   50 QFMFAFTYSMALKSAVELRLADIMHSHGCPITLS--QLASRIDSSCPDIS-HLARIMRMLVYKGIF--AAHHPSDGGDETLYGTTHISKWLLHDSE-LSLAPMILVQNNQWLLAPWHYLSQCVKKGGIPFRKAHGSTFWDFASQNPQLNNLFNEAMACTTKITMKAFVSHYK 547
            Q + +    M LK+A+EL L +IM   G    LS   +AS + +  PD    L RI+R+L    I   +     DG  E LYG   + K+L  + + +S++P+ L+  ++ L+  W++L   + +GGIPF KA+G T +++   +P+ N +FN+ M+  +K+ MK  +  YK
Sbjct:   24 QLISSSVLPMVLKTAIELDLLEIMAKAGPGALLSPSDIASHLPTKNPDAPVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSKMAMKKILESYK 195          
BLAST of BQ622990 vs. ExPASy Swiss-Prot
Match: IMT1_MESCR (Inositol 4-methyltransferase OS=Mesembryanthemum crystallinum GN=IMT1 PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.550e-18
Identity = 48/166 (28.92%), Postives = 95/166 (57.23%), Query Frame = 2
Query:   62 AFTYSMALKSAVELRLADIMHS--HGCPITLSQLASRIDSSCPDISHLA-RIMRMLVYKGIFAAH-HPSDGGDETLYGTTHISKWLL-HDSELSLAPMILVQNNQWLLAPWHYLSQCVKKGGIPFRKAHGSTFWDFASQNPQLNNLFNEAMACTTKITMKAFVSHY 544
            A  + M LKSA EL++ DI      G  ++ S++AS+I +  P+   L  R++R+L    +        +GG + +YG   +  +L  +D + SL P++++ +++ ++  W +L+  + +GG+PF++AHG   +D+   + + N++FN+ MA  T + MK  + +Y
Sbjct:   31 AAAFPMILKSAFELKILDIFSKAGEGVFVSTSEIASQIGAKNPNAPVLLDRMLRLLASHSVLTCKLQKGEGGSQRVYGPAPLCNYLASNDGQGSLGPLLVLHHDKVMMESWFHLNDYILEGGVPFKRAHGMIQFDYTGTDERFNHVFNQGMAHHTILVMKKLLDNY 196          

HSP 2 Score: 21.9422 bits (45), Expect = 4.550e-18
Identity = 7/13 (53.85%), Postives = 12/13 (92.31%), Query Frame = 3
Query:  552 DGFNNIRSMVDVG 590
            +GFN+++ +VDVG
Sbjct:  197 NGFNDVKVLVDVG 209          
BLAST of BQ622990 vs. ExPASy Swiss-Prot
Match: COMT2_POPTM (Caffeic acid 3-O-methyltransferase 2 OS=Populus tremuloides GN=OMT2 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 7.173e-18
Identity = 55/172 (31.98%), Postives = 95/172 (55.23%), Query Frame = 2
Query:   50 QFMFAFTYSMALKSAVELRLADIMHSHGCPITL--SQLASRIDSSCPDIS-HLARIMRMLVYKGIF--AAHHPSDGGDETLYGTTHISKWLLHDSE-LSLAPMILVQNNQWLLAPWHYLSQCVKKGGIPFRKAHGSTFWDFASQNPQLNNLFNEAMACTTKITMKAFVSHYK 547
            Q + +    M LK+A+EL L +IM   G    L  S +AS + +  P+    L RI+R+L    I   +     DG  E LYG   + K+L  + + +S++P+ L+  ++ L+  W++L   + +GGIPF KA+G T +++   +P+ N +FN+ M+  +K+ MK  +  YK
Sbjct:   24 QLISSSVLPMVLKTAIELDLLEIMAKAGPGALLPPSDIASHLPTKNPNAPVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTRNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSVHSKMAMKKILETYK 195          
BLAST of BQ622990 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 7.173e-18
Identity = 60/172 (34.88%), Postives = 94/172 (54.65%), Query Frame = 2
Query:   50 QFMFAFTYSMALKSAVELRLADIMHSHGCPITLS--QLASRIDSSCPDIS-HLARIMRMLVYKGI--FAAHHPSDGGDETLYGTTHISKWLLHDSE-LSLAPMILVQNNQWLLAPWHYLSQCVKKGGIPFRKAHGSTFWDFASQNPQLNNLFNEAMACTTKITMKAFVSHYK 547
            Q   A    M LK+A+EL L +IM   G    LS   LAS++ +  P+    L R++R+L    I  ++     DG  E LYG   + K+L  + + +S+A + L+  ++ L+  W++L   V  GGIPF KA+G T +D+   +P+ N +FN+ MA  + ITMK  +  YK
Sbjct:   25 QLASASVLPMVLKAAIELDLLEIMAKAGPGAFLSPNDLASQLPTKNPEAPVMLDRMLRLLASYSILTYSLRTLPDGKVERLYGLGPVCKFLTKNEDGVSIAALCLMNQDKVLVESWYHLKDAVLDGGIPFNKAYGMTAFDYHGTDPRFNKVFNKGMADHSTITMKKILETYK 196          
BLAST of BQ622990 vs. ExPASy Swiss-Prot
Match: IEMT_CLABR ((Iso)eugenol O-methyltransferase OS=Clarkia breweri GN=IEMT1 PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 9.368e-18
Identity = 55/172 (31.98%), Postives = 94/172 (54.65%), Query Frame = 2
Query:   50 QFMFAFTYSMALKSAVELRLADIMHSHGCP---ITLSQLASRIDSSCPDIS-HLARIMRMLVYKGI--FAAHHPSDGGDETLYGTTHISKWLLHDSE-LSLAPMILVQNNQWLLAPWHYLSQCVKKGGIPFRKAHGSTFWDFASQNPQLNNLFNEAMACTTKITMKAFVSHY 544
            Q   A    MALK+A+EL + +IM     P   I+ +++A+++ ++ P+    L R++R+L    +  +       G  E LYG   + K+L  + + +SLAP +L   ++ LL PW YL   + +GGIPF KA+G   +D+   + + N +FN+ M+  + ITMK  +  Y
Sbjct:   27 QLASAAVLPMALKAAIELDVLEIMAKSVPPSGYISPAEIAAQLPTTNPEAPVMLDRVLRLLASYSVVTYTLRELPSGKVERLYGLAPVCKFLTKNEDGVSLAPFLLTATDKVLLEPWFYLKDAILEGGIPFNKAYGMNEFDYHGTDHRFNKVFNKGMSSNSTITMKKILEMY 198          
BLAST of BQ622990 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGU (Caffeic acid 3-O-methyltransferase OS=Eucalyptus gunnii GN=OMT PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 9.368e-18
Identity = 57/172 (33.14%), Postives = 94/172 (54.65%), Query Frame = 2
Query:   50 QFMFAFTYSMALKSAVELRLADIMHSHGCPITLS--QLASRIDSSCPDIS-HLARIMRMLVYKGIFAA--HHPSDGGDETLYGTTHISKWLLHDSE-LSLAPMILVQNNQWLLAPWHYLSQCVKKGGIPFRKAHGSTFWDFASQNPQLNNLFNEAMACTTKITMKAFVSHYK 547
            Q   A    M LK+A+EL L +IM   G    LS  ++A+++ +  P+    L RI R+L    +      +  DG  E LYG   + K+L+ + + +S+A + L+  ++ L+  W+YL   V +GGIPF KA+G T +++   +P+ N +FN  M+  + ITMK  +  YK
Sbjct:   26 QLASASVLPMVLKAAIELDLLEIMAKAGPGAFLSPGEVAAQLPTQNPEAPVMLDRIFRLLASYSVLTCTLRNLPDGKVERLYGLAPVCKFLVKNEDGVSIAALNLMNQDKILMESWYYLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKIFNRGMSDHSTITMKKILETYK 197          
The following BLAST results are available for this feature:
BLAST of BQ622990 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
COMT1_POPKI3.803e-1933.72Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]
COMT1_COFCA3.803e-1933.13Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]
COMT1_CLABR4.967e-1932.49Caffeic acid 3-O-methyltransferase OS=Clarkia brew... [more]
COMT1_POPTM6.488e-1933.72Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]
COMT3_POPKI3.220e-1832.56Caffeic acid 3-O-methyltransferase 3 OS=Populus ki... [more]
IMT1_MESCR4.550e-1828.92Inositol 4-methyltransferase OS=Mesembryanthemum c... [more]
COMT2_POPTM7.173e-1831.98Caffeic acid 3-O-methyltransferase 2 OS=Populus tr... [more]
COMT1_ROSCH7.173e-1834.88Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
IEMT_CLABR9.368e-1831.98(Iso)eugenol O-methyltransferase OS=Clarkia brewer... [more]
COMT1_EUCGU9.368e-1833.14Caffeic acid 3-O-methyltransferase OS=Eucalyptus g... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_00081 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00081 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622990 ID=BQ622990; Name=BQ622990; organism=Citrus sinensis; type=EST; length=613bp
ATCAATGGATGTTCACGAGGAACTACTAAGAGGGCAAGCTGAAGTATGGC
AATTCATGTTCGCCTTTACATACTCTATGGCATTAAAATCCGCTGTGGAA
CTTCGCTTAGCTGATATTATGCACTCACATGGCTGTCCAATCACTTTGTC
CCAGTTAGCCTCAAGAATTGATTCGTCTTGTCCGGATATTTCCCACCTTG
CACGCATCATGAGAATGCTTGTATACAAAGGAATTTTTGCCGCACATCAT
CCGTCAGACGGTGGTGATGAGACTCTGTACGGAACGACCCACATATCAAA
ATGGCTACTACATGACTCAGAGCTAAGTCTTGCTCCAATGATTCTAGTAC
AAAACAATCAATGGTTACTGGCACCATGGCATTACCTTAGCCAATGTGTG
AAAAAAGGTGGCATTCCTTTCAGGAAGGCTCACGGCTCTACATTTTGGGA
TTTTGCTTCCCAGAACCCTCAATTGAACAACTTGTTCAATGAGGCCATGG
CATGCACGACCAAGATCACCATGAAGGCTTTTGTATCACATTATAAAGTA
GGATGGGTTCAATAACATACGATCAATGGTTGATGTGGGGTGGGTGGCAC
TGGCACAGCGCTT
back to top