BQ622990

Overview
NameBQ622990
Unique NameBQ622990
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length613
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ622990 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGL (Caffeic acid 3-O-methyltransferase (Fragment) OS=Eucalyptus globulus GN=COMT1 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.598e-17
Identity = 56/171 (32.75%), Postives = 90/171 (52.63%), Query Frame = 2
Query:   50 QFMFAFTYSMALKSAVELRLADIMH--SHGCPITLSQLASRIDSSCPDIS-HLARIMRMLVYKGIFAAH--HPSDGGDETLYGTTHISKWLLHDSE-LSLAPMILVQNNQWLLAPWHYLSQCVKKGGIPFRKAHGSTFWDFASQNPQLNNLFNEAMACTTKITMKAFVSHY 544
            Q   A      L +A+EL L +IM     G  +T  ++AS++ +  PD    L RI R+L    +         +G  E LYG   + K+L+ + + +SLAP+ L+  ++  L  W+Y+   + +GGIPF KAHG T +D+   +P+ N +FN AM+  + I MK  +  Y
Sbjct:    7 QLATASVLPAVLTAAIELDLLEIMARAGPGAYLTPGEVASQLPTQNPDAPVMLDRIFRLLASYSVLTCTLCDLPEGKVERLYGLAPLCKFLVKNEDGVSLAPLRLIDQDRVFLESWYYMKDAILEGGIPFHKAHGMTAFDYPGTDPRFNKIFNRAMSDHSTIMMKKILETY 177          
BLAST of BQ622990 vs. ExPASy Swiss-Prot
Match: COOMT_COPJA (Columbamine O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.087e-17
Identity = 51/175 (29.14%), Postives = 94/175 (53.71%), Query Frame = 2
Query:   14 HEELLRGQAEVWQFMFAFTYSMALKSAVELRLADIMHSHGCPITLSQLASRIDSSCPDISHLARIMRMLVYKGIFAAHHPSDGGDETLYGTTHISKWLLHDSELSLAPMILVQNNQWLLAPWHYLSQCVKKGGIPFRKAHGSTFWDFASQNPQLNNLFNEAMACTTKITMKAFVS 538
            +++ ++ QA+VW+ MF F  ++ L+S V L + DI+H++G P+TLSQL + +      I      MR LV+  +F          E  Y  T  SK L+H  + SLAP +++Q +    + W ++   V  G  P+ +++ ++ ++    +P++N + N+AM   +   + A VS
Sbjct:    9 NDDEIKAQAQVWKHMFGFAETIMLRSTVSLGIPDIIHNNG-PVTLSQLVTHLPLKSTSIDRFHHFMRYLVHMQLFTI-STDQITKEDKYELTPASKLLVHGHQKSLAPYVMLQTHPEEFSVWSHVIN-VLDGKKPYWESNDTSMYEKTEGDPEINEILNDAMTSHSTFMLPALVS 180          
BLAST of BQ622990 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.087e-17
Identity = 58/183 (31.69%), Postives = 100/183 (54.64%), Query Frame = 2
Query:   35 QAEVWQFMFAFTYS------MALKSAVELRLADIMHSHG--CPITLSQLASRIDSSCPDIS-HLARIMRMLVYKGIF--AAHHPSDGGDETLYGTTHISKWLLHDSE-LSLAPMILVQNNQWLLAPWHYLSQCVKKGGIPFRKAHGSTFWDFASQNPQLNNLFNEAMACTTKITMKAFVSHYK 547
            Q E   F+FA   +      M LKSA+EL L +IM   G    I+ S+LA+++ +  P+    L R++R+L    +         DG  E LY    + K L  +++ +S+AP++L+  ++ L+  W++L+  V  GG+PF KA+G T +++   +P+ N +FN  M+  + +TMK  +  YK
Sbjct:   10 QTEDEAFLFAMQLASASVLPMVLKSALELDLLEIMAKAGPGAAISPSELAAQLPTKNPEAPVMLDRMLRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKLLTKNADGVSVAPLLLMNQDKVLMESWYHLTDAVLDGGVPFNKAYGMTAFEYHGTDPRFNKVFNRGMSDHSTMTMKKILEDYK 192          
BLAST of BQ622990 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.726e-17
Identity = 52/163 (31.90%), Postives = 94/163 (57.67%), Query Frame = 2
Query:   77 MALKSAVELRLADIMHSHG--CPITLSQLASRIDSSCPDIS-HLARIMRMLVYKGIF--AAHHPSDGGDETLYGTTHISKWLLHDSE-LSLAPMILVQNNQWLLAPWHYLSQCVKKGGIPFRKAHGSTFWDFASQNPQLNNLFNEAMACTTKITMKAFVSHYK 547
            M LKSA+EL L +++   G    ++ S+LA+++ +  PD    L RI+R+L    +         DGG E LY    + K+L  + + +S+A ++L+  ++ L+  W++L   V +GGIPF KA+G T +++  ++P+ N +FN+ M+  + I MK  +  Y+
Sbjct:   34 MVLKSAIELDLLELIKKSGPGAYVSPSELAAQLPTQNPDAPVMLDRILRLLASYSVLNCTLKDLPDGGIERLYSLAPVCKFLTKNEDGVSMAALLLMNQDKVLMESWYHLKDAVLEGGIPFNKAYGMTAFEYHGKDPRFNKVFNQGMSNHSTIIMKKILEIYQ 196          
BLAST of BQ622990 vs. ExPASy Swiss-Prot
Match: COMT2_OCIBA (Caffeic acid 3-O-methyltransferase 2 OS=Ocimum basilicum GN=COMT2 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 3.560e-17
Identity = 55/171 (32.16%), Postives = 95/171 (55.56%), Query Frame = 2
Query:   50 QFMFAFTYSMALKSAVELRLADIMHSHGCPITLS--QLASRIDSSCPDIS-HLARIMRMLVYKGIFAAHHPS--DGGDETLYGTTHISKWLLHDSE-LSLAPMILVQNNQWLLAPWHYLSQCVKKGGIPFRKAHGSTFWDFASQNPQLNNLFNEAMACTTKITMKAFVSHY 544
            Q   A    M LKSA+EL L +++   G    +S  +LA+++ ++  +    L RI+R+L    I      +  DGG + LYG   + K+L  + + +S+AP+ L+  ++ L+  W++L   V  GGIPF KA+G T +++   +P+ N +FN+ M+  + ITMK  +  Y
Sbjct:   23 QLASASVLPMVLKSAIELDLLELIKKAGAGAFVSPAELAAQLLTTNAEAHVMLDRILRLLTSYAILECRLKTLPDGGVQRLYGLAPVCKFLTKNEDGVSMAPLALMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILETY 193          
BLAST of BQ622990 vs. ExPASy Swiss-Prot
Match: ZRP4_MAIZE (O-methyltransferase ZRP4 OS=Zea mays GN=ZRP4 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.307e-16
Identity = 53/175 (30.29%), Postives = 88/175 (50.29%), Query Frame = 2
Query:   17 EELLRGQAEVWQFMFAFTYSMALKSAVELRLADIMHSHGCPITLSQLASRIDSSCPDISHLARIMRMLVYKGIFAAHHPSDGGD---ETLYGTTHISKWLL--HDSELSLAPMILVQNNQWLLAPWHYLS---QCVKKGGIPFRKAHGSTFWDFASQNPQLNNLFNEAMACTTKI 517
            + LL  Q E+W   FAF  SMALKSA+ LR+AD +H HG   +LSQ+ S++      +S L R+MR+L    +F       G D   E +Y  T +S+ L+    S+L+  P+  +  +  +++P+  L    Q        F+  HG   W+    +   + L N+ +A  +++
Sbjct:   11 QSLLDAQLELWHTTFAFMKSMALKSAIHLRIADAIHLHGGAASLSQILSKVHLHPSRVSSLRRLMRVLTTTNVFGTQPLGGGSDDDSEPVYTLTPVSRLLIGSQSSQLAQTPLAAMVLDPTIVSPFSELGAWFQHELPDPCIFKHTHGRGIWELTKDDATFDALVNDGLASDSQL 185          
BLAST of BQ622990 vs. ExPASy Swiss-Prot
Match: OMT2_CHRAE (Quercetin 3-O-methyltransferase 2 OS=Chrysosplenium americanum GN=OMT2 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.014e-16
Identity = 51/169 (30.18%), Postives = 93/169 (55.03%), Query Frame = 2
Query:   50 QFMFAFTYSMALKSAVELRLADIMHSHGCPITLSQLASRIDSSCPDISHLA-RIMRML-VYKGIFAAHHPSDGGDETLYGTTHISKWLLHDSE-LSLAPMILVQNNQWLLAPWHYLSQCVKKGGIPFRKAHGSTFWDFASQNPQLNNLFNEAMACTTKITMKAFVSHYK 547
            Q   A    M LKSA+EL L +I+      ++ +++AS + ++ PD   +  RI+R+L  Y  +  +    D  D+ +YG   + K+L  + + +S+A + L+  ++ L+  W++L   V  GGIPF KA+G + +++   +P+ N +FN  M+  + ITMK     Y+
Sbjct:    6 QLACASVLPMVLKSAIELDLLEIIRGQDTCMSPTEIASHLPTTNPDAPAMVDRILRLLSCYSVVTCSVRSVD--DQRVYGLAPVCKYLTKNQDGVSIAALCLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMSSFEYHGTDPRFNKVFNRGMSDHSTITMKKVFQTYQ 172          
BLAST of BQ622990 vs. ExPASy Swiss-Prot
Match: OMT1_CHRAE (Quercetin 3-O-methyltransferase 1 OS=Chrysosplenium americanum GN=OMT1 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.014e-16
Identity = 51/169 (30.18%), Postives = 93/169 (55.03%), Query Frame = 2
Query:   50 QFMFAFTYSMALKSAVELRLADIMHSHGCPITLSQLASRIDSSCPDISHLA-RIMRML-VYKGIFAAHHPSDGGDETLYGTTHISKWLLHDSE-LSLAPMILVQNNQWLLAPWHYLSQCVKKGGIPFRKAHGSTFWDFASQNPQLNNLFNEAMACTTKITMKAFVSHYK 547
            Q   A    M LKSA+EL L +I+      ++ +++AS + ++ PD   +  RI+R+L  Y  +  +    D  D+ +YG   + K+L  + + +S+A + L+  ++ L+  W++L   V  GGIPF KA+G + +++   +P+ N +FN  M+  + ITMK     Y+
Sbjct:    6 QLASASVLPMVLKSAIELDLLEIIRGQDTCMSPTEIASHLPTTNPDAPAMVDRILRLLSCYSVVTCSVRSVD--DQRVYGLAPVCKYLTKNQDGVSIAALCLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMSSFEYHGTDPRFNKVFNRGMSDHSTITMKKVFQAYQ 172          
BLAST of BQ622990 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.028e-16
Identity = 54/171 (31.58%), Postives = 96/171 (56.14%), Query Frame = 2
Query:   50 QFMFAFTYSMALKSAVELRLADIMHSHGCPITLS--QLASRIDSSCPDIS-HLARIMRMLVYKGIF--AAHHPSDGGDETLYGTTHISKWLLHDSE-LSLAPMILVQNNQWLLAPWHYLSQCVKKGGIPFRKAHGSTFWDFASQNPQLNNLFNEAMACTTKITMKAFVSHY 544
            Q   A    M LKSA+EL L +I+   G    +S  ++AS++ ++ PD    L R++R+L    I   +     DG  + LYG   ++K+L+ + + +S++ + L+  ++ L+  W++L   V  GGIPF KA+G T +++   +P+ N +FN+ M+  + ITMK  +  Y
Sbjct:   25 QLASASVLPMILKSALELDLLEIIAKAGPGAQISPIEIASQLPTTNPDAPVMLDRMLRLLACYIILTCSVRTQQDGKVQRLYGLATVAKYLVKNEDGVSISALNLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETY 195          

HSP 2 Score: 20.7866 bits (42), Expect = 3.028e-16
Identity = 7/12 (58.33%), Postives = 10/12 (83.33%), Query Frame = 3
Query:  555 GFNNIRSMVDVG 590
            GF  ++S+VDVG
Sbjct:  197 GFEGLKSLVDVG 208          
BLAST of BQ622990 vs. ExPASy Swiss-Prot
Match: COMT1_CAPCH (Caffeic acid 3-O-methyltransferase OS=Capsicum chinense GN=COMT PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.145e-15
Identity = 53/171 (30.99%), Postives = 92/171 (53.80%), Query Frame = 2
Query:   50 QFMFAFTYSMALKSAVELRLADIMHSHG--CPITLSQLASRIDSSCPDIS-HLARIMRMLVYKGIF--AAHHPSDGGDETLYGTTHISKWLLHDSE-LSLAPMILVQNNQWLLAPWHYLSQCVKKGGIPFRKAHGSTFWDFASQNPQLNNLFNEAMACTTKITMKAFVSHY 544
            Q   A    M LK+ VEL L +IM   G    I+ S+LA+++ +  P+    L R+ R+L    +         DG  E LY    + K+L  + + +S+AP++L+  ++ L+  W++L+  V  GG+PF KA+G T +++   +P+ N +FN  M+  T ++MK  +  Y
Sbjct:   21 QLASASVLPMVLKATVELDLLEIMAKSGPGAFISPSELAAQLPTKNPEAPVMLDRMFRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKFLTKNGDGVSIAPILLMNQDKVLMESWYHLTDAVLDGGVPFNKAYGMTTFEYHGTDPRFNKVFNCGMSDHTTLSMKKILEDY 191          
The following BLAST results are available for this feature:
BLAST of BQ622990 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
COMT1_EUCGL1.598e-1732.75Caffeic acid 3-O-methyltransferase (Fragment) OS=E... [more]
COOMT_COPJA2.087e-1729.14Columbamine O-methyltransferase OS=Coptis japonica... [more]
COMT1_CAPAN2.087e-1731.69Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]
COMT1_CATRO2.726e-1731.90Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]
COMT2_OCIBA3.560e-1732.16Caffeic acid 3-O-methyltransferase 2 OS=Ocimum bas... [more]
ZRP4_MAIZE2.307e-1630.29O-methyltransferase ZRP4 OS=Zea mays GN=ZRP4 PE=2 ... [more]
OMT2_CHRAE3.014e-1630.18Quercetin 3-O-methyltransferase 2 OS=Chrysospleniu... [more]
OMT1_CHRAE3.014e-1630.18Quercetin 3-O-methyltransferase 1 OS=Chrysospleniu... [more]
COMT1_MEDSA3.028e-1631.58Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT1_CAPCH1.145e-1530.99Caffeic acid 3-O-methyltransferase OS=Capsicum chi... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00081 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00081 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622990 ID=BQ622990; Name=BQ622990; organism=Citrus sinensis; type=EST; length=613bp
ATCAATGGATGTTCACGAGGAACTACTAAGAGGGCAAGCTGAAGTATGGC
AATTCATGTTCGCCTTTACATACTCTATGGCATTAAAATCCGCTGTGGAA
CTTCGCTTAGCTGATATTATGCACTCACATGGCTGTCCAATCACTTTGTC
CCAGTTAGCCTCAAGAATTGATTCGTCTTGTCCGGATATTTCCCACCTTG
CACGCATCATGAGAATGCTTGTATACAAAGGAATTTTTGCCGCACATCAT
CCGTCAGACGGTGGTGATGAGACTCTGTACGGAACGACCCACATATCAAA
ATGGCTACTACATGACTCAGAGCTAAGTCTTGCTCCAATGATTCTAGTAC
AAAACAATCAATGGTTACTGGCACCATGGCATTACCTTAGCCAATGTGTG
AAAAAAGGTGGCATTCCTTTCAGGAAGGCTCACGGCTCTACATTTTGGGA
TTTTGCTTCCCAGAACCCTCAATTGAACAACTTGTTCAATGAGGCCATGG
CATGCACGACCAAGATCACCATGAAGGCTTTTGTATCACATTATAAAGTA
GGATGGGTTCAATAACATACGATCAATGGTTGATGTGGGGTGGGTGGCAC
TGGCACAGCGCTT
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