BQ622990

Overview
NameBQ622990
Unique NameBQ622990
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length613
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ622990 vs. ExPASy Swiss-Prot
Match: COMT1_ZINEL (Caffeic acid 3-O-methyltransferase OS=Zinnia elegans PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.654e-14
Identity = 59/204 (28.92%), Postives = 101/204 (49.51%), Query Frame = 2
Query:   50 QFMFAFTYSMALKSAVELRLADIMHSHGCPITLSQLASRIDSSCPDISH------LARIMRMLVYKGIFAA--HHPSDGGDETLYGTTHISKWLL-HDSELSLAPMILVQNNQWLLAPWHYLSQCVKKGGIPFRKAHGSTFWDFASQNPQLNNLFNEAMACTTKITMKAFVSHYKVGWVQ*HTING*CGV-------GGTGTAL 613
            Q   A    M LK+A+EL L + +   G   ++S  +S + +  P +++      + RI  +L    +        +DG  E  YG   + K+L+ +D+ +SLAP++L+  ++ L+  W+YL   V  GGIPF KA+G + +++  ++ + N +FN  M   + +TMK  V  Y          NG  G+       GGTG +L
Sbjct:   15 QLASASVLPMVLKTAIELDLLETIAKAGPHGSVS--SSELVAQLPKVNNPEAPVMIDRICSLLASYSVLTCTLKETADGCAERFYGLAPVCKFLIKNDAGVSLAPLLLMNQDKVLMESWYYLKDPVLDGGIPFNKAYGMSAFEYHGKDQRFNKVFNSGMFNHSTMTMKKIVELY----------NGFSGLKTLVDVGGGTGASL 206          
BLAST of BQ622990 vs. ExPASy Swiss-Prot
Match: COMT1_SACOF (Caffeic acid 3-O-methyltransferase OS=Saccharum officinarum GN=COMT PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.821e-14
Identity = 50/173 (28.90%), Postives = 88/173 (50.87%), Query Frame = 2
Query:   50 QFMFAFTYSMALKSAVELRLADIMHSH---GCPITLSQLASRID--SSCPDISHLA-RIMRMLV-YKGIFAAHHPSDGGDETLYGTTHISKWLLHDSE-LSLAPMILVQNNQWLLAPWHYLSQCVKKGGIPFRKAHGSTFWDFASQNPQLNNLFNEAMACTTKITMKAFVSHY 544
            Q   A    M LK+A+EL L +++ +    G  +   ++ +R+    + PD + +  R++R+L  Y  +       DG  E  Y    + KWL  + + +S+A + L+  ++ L+  W+YL   V  GGIPF KA+G T +++   +P+ N +FNE M   + I  K  +  Y
Sbjct:   22 QLASASILPMTLKNALELGLLEVLQAEAPAGKALAPEEVVARLPVAPTNPDAADMVDRMLRLLASYDVVKCQMEDKDGKYERRYSAAPVGKWLTPNEDGVSMAALTLMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNRVFNEGMKNHSVIITKKLLEFY 194          
BLAST of BQ622990 vs. ExPASy Swiss-Prot
Match: COMT1_MAIZE (Caffeic acid 3-O-methyltransferase OS=Zea mays PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 9.074e-13
Identity = 46/166 (27.71%), Postives = 83/166 (50.00%), Query Frame = 2
Query:   77 MALKSAVELRLADIMHSHG----CPITLSQLASRIDSSCPDISHLA----RIMRMLV-YKGIFAAHHPSDGGDETLYGTTHISKWLLHDSE-LSLAPMILVQNNQWLLAPWHYLSQCVKKGGIPFRKAHGSTFWDFASQNPQLNNLFNEAMACTTKITMKAFVSHY 544
            M LK+A+EL L +++          +   ++ +R+ ++  D +  A    R++R+L  Y  +       DG  E  Y    + KWL  + + +S+A + L+  ++ L+  W+YL   V  GGIPF KA+G T +++   + + N +FNE M   + I  K  +  Y
Sbjct:   31 MTLKNAIELGLLEVLQKEAGGGKAALAPEEVVARMPAAPSDPAAAAAMVDRMLRLLASYDVVRCQMEDRDGRYERRYSAAPVCKWLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDFY 196          
BLAST of BQ622990 vs. ExPASy Swiss-Prot
Match: OMT1_ORYSJ (Quercetin 3-O-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=ROMT-9 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.919e-11
Identity = 46/169 (27.22%), Postives = 83/169 (49.11%), Query Frame = 2
Query:   77 MALKSAVELRLADIMHSHGCP--------ITLSQLASRIDSSC-PDISHLA-RIMRMLVYKGIFAAH--HPSDGGDETLYGTTHISKWLLHDSE-LSLAPMILVQNNQWLLAPWHYLSQCVKKGGIPFRKAHGSTFWDFASQNPQLNNLFNEAMACTTKITMKAFVSHY 544
            M LK+A+EL L + + S            +T +++A ++ S   P  + +  R++R+L    +        +DG     Y    + KWL  + + +S+A + L+  ++ L+  W+YL   V  GGIPF KA+G T +++   + + N +FNE M   + I  K  +  Y
Sbjct:   31 MTLKNAIELGLLETLQSAAVAGGGGKAALLTPAEVADKLPSKANPAAADMVDRMLRLLASYNVVRCEMEEGADGKLSRRYAAAPVCKWLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDLY 199          
The following BLAST results are available for this feature:
BLAST of BQ622990 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
COMT1_ZINEL1.654e-1428.92Caffeic acid 3-O-methyltransferase OS=Zinnia elega... [more]
COMT1_SACOF2.821e-1428.90Caffeic acid 3-O-methyltransferase OS=Saccharum of... [more]
COMT1_MAIZE9.074e-1327.71Caffeic acid 3-O-methyltransferase OS=Zea mays PE=... [more]
OMT1_ORYSJ2.919e-1127.22Quercetin 3-O-methyltransferase 1 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00081 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00081 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622990 ID=BQ622990; Name=BQ622990; organism=Citrus sinensis; type=EST; length=613bp
ATCAATGGATGTTCACGAGGAACTACTAAGAGGGCAAGCTGAAGTATGGC
AATTCATGTTCGCCTTTACATACTCTATGGCATTAAAATCCGCTGTGGAA
CTTCGCTTAGCTGATATTATGCACTCACATGGCTGTCCAATCACTTTGTC
CCAGTTAGCCTCAAGAATTGATTCGTCTTGTCCGGATATTTCCCACCTTG
CACGCATCATGAGAATGCTTGTATACAAAGGAATTTTTGCCGCACATCAT
CCGTCAGACGGTGGTGATGAGACTCTGTACGGAACGACCCACATATCAAA
ATGGCTACTACATGACTCAGAGCTAAGTCTTGCTCCAATGATTCTAGTAC
AAAACAATCAATGGTTACTGGCACCATGGCATTACCTTAGCCAATGTGTG
AAAAAAGGTGGCATTCCTTTCAGGAAGGCTCACGGCTCTACATTTTGGGA
TTTTGCTTCCCAGAACCCTCAATTGAACAACTTGTTCAATGAGGCCATGG
CATGCACGACCAAGATCACCATGAAGGCTTTTGTATCACATTATAAAGTA
GGATGGGTTCAATAACATACGATCAATGGTTGATGTGGGGTGGGTGGCAC
TGGCACAGCGCTT
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