BQ622991

Overview
NameBQ622991
Unique NameBQ622991
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length564
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7528 contig Csv1_Contig7528:644..1210. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ622991 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.477e-48
Identity = 89/108 (82.41%), Postives = 99/108 (91.67%), Query Frame = 3
Query:    3 YSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRA 326
            Y+ G GL AEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAA+IYNKD +WDD W+FWVGPFIGAA+AA YH  ++RA
Sbjct:  172 YTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWVFWVGPFIGAALAALYHVVVIRA 279          
BLAST of BQ622991 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3)

HSP 1 Score: 191.43 bits (485), Expect = 2.520e-48
Identity = 87/108 (80.56%), Postives = 99/108 (91.67%), Query Frame = 3
Query:    3 YSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRA 326
            Y+ G GL AEI+GTF+LVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAA+IYN+  AWDD W+FWVGPFIGAA+AA YHQ ++RA
Sbjct:  174 YTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRGHAWDDHWIFWVGPFIGAALAAIYHQVVIRA 281          
BLAST of BQ622991 vs. ExPASy Swiss-Prot
Match: PIP1_SOLLC (Probable aquaporin PIP-type pTOM75 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.633e-47
Identity = 88/108 (81.48%), Postives = 98/108 (90.74%), Query Frame = 3
Query:    3 YSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRA 326
            Y+ G GL AEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAA+IYN + AW+D W+FWVGP IGAA+AA YHQ I+RA
Sbjct:  173 YTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNDEHAWNDHWIFWVGPMIGAALAAIYHQIIIRA 280          
BLAST of BQ622991 vs. ExPASy Swiss-Prot
Match: PIP15_MAIZE (Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.633e-47
Identity = 87/108 (80.56%), Postives = 98/108 (90.74%), Query Frame = 3
Query:    3 YSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRA 326
            Y+ G GL AEI+GTFVLVYTVFSATD KRSARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAA++YN+  AW+D W+FWVGPFIGAA+AA YH  I+RA
Sbjct:  174 YTKGDGLGAEIVGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVYNRSHAWNDHWIFWVGPFIGAALAAIYHVVIIRA 281          
BLAST of BQ622991 vs. ExPASy Swiss-Prot
Match: PIP2_PEA (Probable aquaporin PIP-type 7a OS=Pisum sativum GN=TRG-31 PE=2 SV=2)

HSP 1 Score: 187.578 bits (475), Expect = 3.639e-47
Identity = 85/108 (78.70%), Postives = 98/108 (90.74%), Query Frame = 3
Query:    3 YSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRA 326
            Y+ G GL AEI+GTF+LVYTVFSATD KRSARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAA+++NK   W+D W+FWVGPFIGAA+AA YHQ ++RA
Sbjct:  176 YTKGDGLGAEIVGTFILVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVFNKKIGWNDHWIFWVGPFIGAALAALYHQVVIRA 283          
BLAST of BQ622991 vs. ExPASy Swiss-Prot
Match: PIP13_ORYSJ (Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica GN=PIP1-3 PE=2 SV=2)

HSP 1 Score: 185.652 bits (470), Expect = 1.383e-46
Identity = 85/108 (78.70%), Postives = 97/108 (89.81%), Query Frame = 3
Query:    3 YSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRA 326
            Y+ G GL AEI+GTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARSLGAA++YN+  AW D W+FWVGPFIGAA+AA YH  ++RA
Sbjct:  174 YTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVYNRAHAWHDHWIFWVGPFIGAALAAIYHVVVIRA 281          
BLAST of BQ622991 vs. ExPASy Swiss-Prot
Match: PIP11_MAIZE (Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 6.862e-46
Identity = 86/108 (79.63%), Postives = 96/108 (88.89%), Query Frame = 3
Query:    3 YSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRA 326
            Y+ G GL AEI+GTF+LVYTVFSATD KR ARDSHVP+LAPLPIGFAVF+VHLAT+ ITGTGINPARSLGAAVIYN+  AW D W+FWVGPFIGAA+AA YHQ I+RA
Sbjct:  173 YTKGDGLGAEIVGTFILVYTVFSATDAKRRARDSHVPILAPLPIGFAVFLVHLATMGITGTGINPARSLGAAVIYNQHHAWADHWIFWVGPFIGAALAAIYHQVIIRA 280          
BLAST of BQ622991 vs. ExPASy Swiss-Prot
Match: PIP27_ORYSJ (Probable aquaporin PIP2-7 OS=Oryza sativa subsp. japonica GN=PIP2-7 PE=2 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 4.448e-45
Identity = 85/114 (74.56%), Postives = 96/114 (84.21%), Query Frame = 3
Query:    3 YSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGAVKAL 344
            YS    L AEI+GTF+LVYTVFSATDPKR+ARDS +PVL PLPIGFAVF+VHLATIPITGTGINPARSLGAAV+YN+  AW D W+FWVGP IGA +AA YH+ +LR  A KAL
Sbjct:  167 YSAAGALGAEIVGTFILVYTVFSATDPKRTARDSFIPVLVPLPIGFAVFVVHLATIPITGTGINPARSLGAAVLYNQHAAWKDHWIFWVGPVIGAFLAAAYHKLVLRGEAAKAL 280          
BLAST of BQ622991 vs. ExPASy Swiss-Prot
Match: PIP16_MAIZE (Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.294e-44
Identity = 83/108 (76.85%), Postives = 93/108 (86.11%), Query Frame = 3
Query:    3 YSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRA 326
            Y+ G GL AE++GTFVLVYTVFSATD KR+ARDSHVP LAPLPIGFAVF+VHLATIPITGTGINPARSLGAA+IY+    W   W+FWVGPF GAA+AA YHQ +LRA
Sbjct:  180 YTKGDGLGAEVVGTFVLVYTVFSATDAKRTARDSHVPALAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYDNPHGWHGHWIFWVGPFAGAALAAVYHQVVLRA 287          
BLAST of BQ622991 vs. ExPASy Swiss-Prot
Match: PIP28_ORYSJ (Probable aquaporin PIP2-8 OS=Oryza sativa subsp. japonica GN=PIP2-8 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.698e-42
Identity = 83/115 (72.17%), Postives = 91/115 (79.13%), Query Frame = 3
Query:    3 YSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVI--YNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGAVKA 341
            YS G G+ AE++GTFVLVYTVFSATDPKR ARDSHVPVLAPLPIG AV +VHLATIPITGTGINPARSLG A++      KAW   W+FWVGPF GAA A  YH +ILR  A KA
Sbjct:  155 YSAGAGVVAEMVGTFVLVYTVFSATDPKRKARDSHVPVLAPLPIGLAVLVVHLATIPITGTGINPARSLGPALVLGLGTTKAWSHLWIFWVGPFAGAAAAMIYHHYILRGAAAKA 269          
The following BLAST results are available for this feature:
BLAST of BQ622991 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
PIP11_ARATH1.477e-4882.41Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1... [more]
PIP12_ORYSJ2.520e-4880.56Probable aquaporin PIP1-2 OS=Oryza sativa subsp. j... [more]
PIP1_SOLLC1.633e-4781.48Probable aquaporin PIP-type pTOM75 OS=Solanum lyco... [more]
PIP15_MAIZE1.633e-4780.56Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1[more]
PIP2_PEA3.639e-4778.70Probable aquaporin PIP-type 7a OS=Pisum sativum GN... [more]
PIP13_ORYSJ1.383e-4678.70Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica ... [more]
PIP11_MAIZE6.862e-4679.63Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1[more]
PIP27_ORYSJ4.448e-4574.56Probable aquaporin PIP2-7 OS=Oryza sativa subsp. j... [more]
PIP16_MAIZE1.294e-4476.85Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1[more]
PIP28_ORYSJ2.698e-4272.17Probable aquaporin PIP2-8 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00082 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00082 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622991 ID=BQ622991; Name=BQ622991; organism=Citrus sinensis; type=EST; length=564bp
GGTACAGCACCGGCGTTGGATTGGCCGCCGAGATCATCGGCACCTTTGTC
TTGGTTTACACTGTCTTCTCGGCCACTGATCCCAAGAGAAGCGCCAGAGA
CTCCCACGTTCCCGTTTTGGCACCGCTCCCCATTGGATTTGCTGTGTTCA
TGGTACACTTGGCCACAATCCCAATCACTGGCACTGGCATTAACCCAGCA
AGGAGTCTCGGGGCCGCTGTTATTTACAACAAGGACAAGGCTTGGGATGA
TCAATGGCTCTTCTGGGTTGGACCCTTCATTGGTGCAGCAATTGCAGCTT
TCTACCACCAATTCATCTTGAGAGCTGGAGCTGTCAAGGCTCTTGGTTCA
TTCAGGAGCCAATCCCGTGTCTGATTTTAGTTTCTTCGACAAGTGGATTA
TCCACATCTTCATGGGGTTAATGATTTAAAATTGGAAAGAAAAAACTGGG
AAGGAGTAGAGGTGTGTTAAGTTTCAAAAAGTGAATAATGAGGGGGGGGT
GATTTGTGCTTTTAAGGAGTTGAGGCAAAAAGTCTCTTAGACAATGAGGG
GGTTTTTTGTAAAT
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