BQ622991

Overview
NameBQ622991
Unique NameBQ622991
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length564
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7528 contig Csv1_Contig7528:644..1210. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ622991 vs. ExPASy Swiss-Prot
Match: AQP1_SHEEP (Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3)

HSP 1 Score: 93.5893 bits (231), Expect = 7.151e-19
Identity = 53/105 (50.48%), Postives = 67/105 (63.81%), Query Frame = 3
Query:    6 STGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 320
            ++G GL  EIIGT  LV  V + TD +R  RD  +    PL IGF+V + HL  I  TG GINPARS G++VI +    + D W+FWVGPFIGAA+A   + FIL
Sbjct:  136 NSGQGLGIEIIGTLQLVLCVLATTD-RRRRRD--LGDSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITHN---FQDHWIFWVGPFIGAALAVLIYDFIL 234          
BLAST of BQ622991 vs. ExPASy Swiss-Prot
Match: AQP1_PIG (Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3)

HSP 1 Score: 93.5893 bits (231), Expect = 7.151e-19
Identity = 54/104 (51.92%), Postives = 66/104 (63.46%), Query Frame = 3
Query:    9 TGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 320
            +G GL  EIIGT  LV  V + TD +R  RD  +   APL IGF+V + HL  I  TG GINPARS G+AVI +    + D W+FWVGPFIG A+A   + FIL
Sbjct:  137 SGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSAPLAIGFSVALGHLLAIDYTGCGINPARSFGSAVITHN---FQDHWVFWVGPFIGGALAVLIYDFIL 233          
BLAST of BQ622991 vs. ExPASy Swiss-Prot
Match: AQP1_BOVIN (Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3)

HSP 1 Score: 93.2041 bits (230), Expect = 9.339e-19
Identity = 53/105 (50.48%), Postives = 67/105 (63.81%), Query Frame = 3
Query:    6 STGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 320
            ++G GL  EIIGT  LV  V + TD +R  RD  +    PL IGF+V + HL  I  TG GINPARS G++VI +    + D W+FWVGPFIGAA+A   + FIL
Sbjct:  136 NSGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITHN---FQDHWIFWVGPFIGAALAVLIYDFIL 233          
BLAST of BQ622991 vs. ExPASy Swiss-Prot
Match: AQP1_PONAB (Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3)

HSP 1 Score: 90.1225 bits (222), Expect = 7.906e-18
Identity = 52/105 (49.52%), Postives = 66/105 (62.86%), Query Frame = 3
Query:    6 STGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 320
            ++G GL  EIIGT  LV  V + TD +R  RD  +   APL IG +V + HL  I  TG GINPARS G+AVI +    + + W+FWVGPFIG A+A   + FIL
Sbjct:  134 NSGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVITHN---FSNHWIFWVGPFIGGALAVLIYDFIL 231          
BLAST of BQ622991 vs. ExPASy Swiss-Prot
Match: AQP1_HUMAN (Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3)

HSP 1 Score: 90.1225 bits (222), Expect = 7.906e-18
Identity = 52/105 (49.52%), Postives = 66/105 (62.86%), Query Frame = 3
Query:    6 STGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 320
            ++G GL  EIIGT  LV  V + TD +R  RD  +   APL IG +V + HL  I  TG GINPARS G+AVI +    + + W+FWVGPFIG A+A   + FIL
Sbjct:  134 NSGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVITHN---FSNHWIFWVGPFIGGALAVLIYDFIL 231          
BLAST of BQ622991 vs. ExPASy Swiss-Prot
Match: AQP1_RAT (Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4)

HSP 1 Score: 89.7373 bits (221), Expect = 1.033e-17
Identity = 51/105 (48.57%), Postives = 67/105 (63.81%), Query Frame = 3
Query:    6 STGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 320
            ++G GL  EIIGT  LV  V + TD +R  RD  +   APL IG +V + HL  I  TG GINPARS G+AV+    + + + W+FWVGPFIG+A+A   + FIL
Sbjct:  134 NSGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVL---TRNFSNHWIFWVGPFIGSALAVLIYDFIL 231          
BLAST of BQ622991 vs. ExPASy Swiss-Prot
Match: AQP1_CANFA (Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3)

HSP 1 Score: 89.7373 bits (221), Expect = 1.033e-17
Identity = 52/105 (49.52%), Postives = 65/105 (61.90%), Query Frame = 3
Query:    6 STGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 320
            ++G GL  EIIGT  LV  V + TD +R  RD  +    PL IG +V + HL  I  TG GINPARS G++VI +  K   D W+FWVGPFIG A+A   + FIL
Sbjct:  136 NSGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSGPLAIGLSVALGHLLAIDYTGCGINPARSFGSSVITHNFK---DHWIFWVGPFIGGALAVLIYDFIL 233          
BLAST of BQ622991 vs. ExPASy Swiss-Prot
Match: AQP1_MOUSE (Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3)

HSP 1 Score: 89.3521 bits (220), Expect = 1.349e-17
Identity = 51/105 (48.57%), Postives = 66/105 (62.86%), Query Frame = 3
Query:    6 STGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 320
            ++G GL  EIIGT  LV  V + TD +R  RD  +   APL IG +V + HL  I  TG GINPARS G+AV+    + + + W+FWVGPFIG A+A   + FIL
Sbjct:  134 NSGQGLGIEIIGTLQLVLCVLATTDRRR--RD--LGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVL---TRNFSNHWIFWVGPFIGGALAVLIYDFIL 231          
BLAST of BQ622991 vs. ExPASy Swiss-Prot
Match: AQP4_RAT (Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.322e-16
Identity = 44/104 (42.31%), Postives = 63/104 (60.58%), Query Frame = 3
Query:    6 STGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFI 317
            + G GL  E+I TF LV+T+F++ D KR+     V     L IGF+V + HL  I  TG  +NPARS G AVI      W++ W++WVGP IGA +A   ++++
Sbjct:  155 TAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSVA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLAGALYEYV 251          
BLAST of BQ622991 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.338e-16
Identity = 43/104 (41.35%), Postives = 63/104 (60.58%), Query Frame = 3
Query:    6 STGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFI 317
            + G GL  E+I TF LV+T+F++ D KR+     +     L IGF+V + HL  I  TG  +NPARS G AVI      W++ W++WVGP IGA +A   ++++
Sbjct:  158 TAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA----LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGN---WENHWIYWVGPIIGAVLAGALYEYV 254          
The following BLAST results are available for this feature:
BLAST of BQ622991 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
AQP1_SHEEP7.151e-1950.48Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3[more]
AQP1_PIG7.151e-1951.92Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3[more]
AQP1_BOVIN9.339e-1950.48Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3[more]
AQP1_PONAB7.906e-1849.52Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3[more]
AQP1_HUMAN7.906e-1849.52Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3[more]
AQP1_RAT1.033e-1748.57Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4[more]
AQP1_CANFA1.033e-1749.52Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3[more]
AQP1_MOUSE1.349e-1748.57Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3[more]
AQP4_RAT3.322e-1642.31Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1[more]
AQP4_NOTAL4.338e-1641.35Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00082 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00082 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622991 ID=BQ622991; Name=BQ622991; organism=Citrus sinensis; type=EST; length=564bp
GGTACAGCACCGGCGTTGGATTGGCCGCCGAGATCATCGGCACCTTTGTC
TTGGTTTACACTGTCTTCTCGGCCACTGATCCCAAGAGAAGCGCCAGAGA
CTCCCACGTTCCCGTTTTGGCACCGCTCCCCATTGGATTTGCTGTGTTCA
TGGTACACTTGGCCACAATCCCAATCACTGGCACTGGCATTAACCCAGCA
AGGAGTCTCGGGGCCGCTGTTATTTACAACAAGGACAAGGCTTGGGATGA
TCAATGGCTCTTCTGGGTTGGACCCTTCATTGGTGCAGCAATTGCAGCTT
TCTACCACCAATTCATCTTGAGAGCTGGAGCTGTCAAGGCTCTTGGTTCA
TTCAGGAGCCAATCCCGTGTCTGATTTTAGTTTCTTCGACAAGTGGATTA
TCCACATCTTCATGGGGTTAATGATTTAAAATTGGAAAGAAAAAACTGGG
AAGGAGTAGAGGTGTGTTAAGTTTCAAAAAGTGAATAATGAGGGGGGGGT
GATTTGTGCTTTTAAGGAGTTGAGGCAAAAAGTCTCTTAGACAATGAGGG
GGTTTTTTGTAAAT
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