BQ622991

Overview
NameBQ622991
Unique NameBQ622991
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length564
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7528 contig Csv1_Contig7528:644..1210. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ622991 vs. ExPASy Swiss-Prot
Match: TIP13_ARATH (Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.706e-12
Identity = 43/97 (44.33%), Postives = 56/97 (57.73%), Query Frame = 3
Query:   30 EIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFI 317
            EI+ TF LVYTV++ A DPK+      + ++APL IG  V    L      G  +NPA S G AV+      W + W++WVGPFIGAAIAA  +  I
Sbjct:  148 EIVMTFGLVYTVYATAVDPKKG----DIGIIAPLAIGLIVGANILVGGAFDGASMNPAVSFGPAVV---SWIWTNHWVYWVGPFIGAAIAAIVYDTI 237          
BLAST of BQ622991 vs. ExPASy Swiss-Prot
Match: AQY1_YEAST (Aquaporin-1 OS=Saccharomyces cerevisiae GN=AQY1 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 1.706e-12
Identity = 38/93 (40.86%), Postives = 53/93 (56.99%), Query Frame = 3
Query:   18 GLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIA 296
            GL  E+ GT +L  TV      KR         +A LPIG ++F+ H+A    TGTG+NPARSLGAAV       +   W++W+GP +G+ +A
Sbjct:  177 GLFLEMFGTAILCLTVLMTAVEKRETN-----FMAALPIGISLFIAHVALTAYTGTGVNPARSLGAAVAARYFPHY--HWIYWIGPLLGSILA 262          
BLAST of BQ622991 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUSU (Aquaporin Z OS=Brucella suis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.706e-12
Identity = 40/106 (37.74%), Postives = 55/106 (51.89%), Query Frame = 3
Query:    3 YSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 320
            YS   GL  EII T   +  +  +T     A        AP+ IGF + ++HL +IP+T T +NPARS G A ++    A    WLFWV P +GA I A   + +L
Sbjct:  127 YSMMAGLLIEIILTAFFIIIILGSTSSLAPAG------FAPIAIGFGLTLIHLVSIPVTNTSVNPARSTGVA-LFADTAALSQLWLFWVAPLVGAVIGAIIWKGLL 225          
BLAST of BQ622991 vs. ExPASy Swiss-Prot
Match: TIP41_ARATH (Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.228e-12
Identity = 40/102 (39.22%), Postives = 58/102 (56.86%), Query Frame = 3
Query:   18 GLAAEIIGTFVLVYTVFSA-TDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 320
            G+  EII TF L++TV++   DPK+ + D   P+L     GF V    LA    +G  +NPARS G A++      W D W++WVGP IG  +A F ++ +L
Sbjct:  138 GIIWEIILTFSLLFTVYATIVDPKKGSLDGFGPLLT----GFVVGANILAGGAFSGASMNPARSFGPALVSGN---WTDHWVYWVGPLIGGGLAGFIYENVL 232          
BLAST of BQ622991 vs. ExPASy Swiss-Prot
Match: TIP23_ARATH (Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.228e-12
Identity = 40/98 (40.82%), Postives = 57/98 (58.16%), Query Frame = 3
Query:   18 GLAAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYH 308
            G+  EI+ TF LVYTV++ A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARS G AV+          W++WVGP +G A+A   +
Sbjct:  142 GVVMEIVVTFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGD---LSQIWIYWVGPLVGGALAGLIY 232          
BLAST of BQ622991 vs. ExPASy Swiss-Prot
Match: AQPZ_VIBPA (Aquaporin Z OS=Vibrio parahaemolyticus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.228e-12
Identity = 39/106 (36.79%), Postives = 59/106 (55.66%), Query Frame = 3
Query:    3 YSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 320
            YS    L +EI+ T + +  +  ATD KR+ +       AP+ IG  + ++HL +IP+T T +NPARS  A  +Y  D A    WLFWV P +G  + A  ++ +L
Sbjct:  128 YSMLAALVSEIVMTMMFLIVIMGATD-KRAPQG-----FAPIAIGLCLTLIHLISIPVTNTSVNPARST-AVAMYVGDWAVSQLWLFWVAPIVGGVLGAVIYKNLL 226          
BLAST of BQ622991 vs. ExPASy Swiss-Prot
Match: AQP6_HUMAN (Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 2.228e-12
Identity = 40/105 (38.10%), Postives = 60/105 (57.14%), Query Frame = 3
Query:    6 STGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 320
            STG  +A E++ T  LV  VF++TD ++++            IG +V + HL  I  TG  +NPARS G A+I  K   +   W+FWVGP +GA +A+  + F+L
Sbjct:  140 STGQAVAVELLLTLQLVLCVFASTDSRQTSGSPATM------IGISVALGHLIGIHFTGCSMNPARSFGPAIIIGK---FTVHWVFWVGPLMGALLASLIYNFVL 235          
BLAST of BQ622991 vs. ExPASy Swiss-Prot
Match: AQPZ_VIBVY (Aquaporin Z OS=Vibrio vulnificus (strain YJ016) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.910e-12
Identity = 38/105 (36.19%), Postives = 55/105 (52.38%), Query Frame = 3
Query:    3 YSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFI 317
            YS    L  EI+   + +  +  ATD +           AP+ IG  + ++HL +IP+T T +NPARS G A +Y  D A    WLFWV P +GA + A  ++ I
Sbjct:  128 YSLTSALVTEIVMAMMFLLVILGATDQRAPQG------FAPIAIGLCLTLIHLISIPVTNTSVNPARSTGVA-LYVGDWATAQLWLFWVAPILGALLGAVAYKLI 225          
BLAST of BQ622991 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUME (Aquaporin Z OS=Brucella melitensis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.910e-12
Identity = 40/106 (37.74%), Postives = 55/106 (51.89%), Query Frame = 3
Query:    3 YSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFIL 320
            YS   GL  EII T   +  +  +T     A        AP+ IGF + ++HL +IP+T T +NPARS G A ++    A    WLFWV P +GA I A   + +L
Sbjct:  127 YSMMAGLLIEIILTAFFIIIILGSTSSLAPAG------FAPIAIGFGLTLIHLVSIPVTNTWVNPARSTGVA-LFADTAALSQLWLFWVAPLVGAVIGAIIWKGLL 225          
BLAST of BQ622991 vs. ExPASy Swiss-Prot
Match: AQPZ1_RHIME (Aquaporin Z 1 OS=Rhizobium meliloti GN=aqpZ1 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.910e-12
Identity = 40/106 (37.74%), Postives = 56/106 (52.83%), Query Frame = 3
Query:    3 YSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPV-LAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFI 317
            YS    L  E++ T   +  +  +T        S VPV  AP+ IG  + ++HL +IP+T T +NPARS G A ++  D A    WLFWV P IGA IA    + +
Sbjct:  127 YSLTAALVTEVVMTAFFLLIILGSTH-------SRVPVGFAPIAIGLGLTLIHLVSIPVTNTSVNPARSTGQA-LFVGDWAISQLWLFWVAPLIGAVIAGIVWKIV 224          
The following BLAST results are available for this feature:
BLAST of BQ622991 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
TIP13_ARATH1.706e-1244.33Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3... [more]
AQY1_YEAST1.706e-1240.86Aquaporin-1 OS=Saccharomyces cerevisiae GN=AQY1 PE... [more]
AQPZ_BRUSU1.706e-1237.74Aquaporin Z OS=Brucella suis GN=aqpZ PE=3 SV=1[more]
TIP41_ARATH2.228e-1239.22Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1... [more]
TIP23_ARATH2.228e-1240.82Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3... [more]
AQPZ_VIBPA2.228e-1236.79Aquaporin Z OS=Vibrio parahaemolyticus GN=aqpZ PE=... [more]
AQP6_HUMAN2.228e-1238.10Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2[more]
AQPZ_VIBVY2.910e-1236.19Aquaporin Z OS=Vibrio vulnificus (strain YJ016) GN... [more]
AQPZ_BRUME2.910e-1237.74Aquaporin Z OS=Brucella melitensis GN=aqpZ PE=3 SV... [more]
AQPZ1_RHIME2.910e-1237.74Aquaporin Z 1 OS=Rhizobium meliloti GN=aqpZ1 PE=3 ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00082 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00082 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ622991 ID=BQ622991; Name=BQ622991; organism=Citrus sinensis; type=EST; length=564bp
GGTACAGCACCGGCGTTGGATTGGCCGCCGAGATCATCGGCACCTTTGTC
TTGGTTTACACTGTCTTCTCGGCCACTGATCCCAAGAGAAGCGCCAGAGA
CTCCCACGTTCCCGTTTTGGCACCGCTCCCCATTGGATTTGCTGTGTTCA
TGGTACACTTGGCCACAATCCCAATCACTGGCACTGGCATTAACCCAGCA
AGGAGTCTCGGGGCCGCTGTTATTTACAACAAGGACAAGGCTTGGGATGA
TCAATGGCTCTTCTGGGTTGGACCCTTCATTGGTGCAGCAATTGCAGCTT
TCTACCACCAATTCATCTTGAGAGCTGGAGCTGTCAAGGCTCTTGGTTCA
TTCAGGAGCCAATCCCGTGTCTGATTTTAGTTTCTTCGACAAGTGGATTA
TCCACATCTTCATGGGGTTAATGATTTAAAATTGGAAAGAAAAAACTGGG
AAGGAGTAGAGGTGTGTTAAGTTTCAAAAAGTGAATAATGAGGGGGGGGT
GATTTGTGCTTTTAAGGAGTTGAGGCAAAAAGTCTCTTAGACAATGAGGG
GGTTTTTTGTAAAT
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