BQ623006

Overview
NameBQ623006
Unique NameBQ623006
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length664
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623006 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.490e-30
Identity = 64/164 (39.02%), Postives = 94/164 (57.32%), Query Frame = 3
Query:    6 KEMSPNQIYCDDDFKYTYPCTPGVSYHGRGALPLYWNYNYGETGEALKVDILNHPEYIENNATLAFQAAMWRWMTPVKKHQPSAHDAFVGNWKPTKNDTLAKRVHGFGTTMNVLYGDQVCGKGDDESMNNMISHYLYYLDLMGVGREEAGPNEVLSCGEQEPFN 497
            +E +P   YC    ++  PC PG  Y+GRG + L +N+NYG  G A+ VD+L++P+ +  +AT++F+ A+W WMTP + ++PS+HD   G W P+  D  A R  G+G   N++ G   CG G D+ + N I  Y  Y    G+G    G N  L C  Q PFN
Sbjct:  175 QEQNPPSDYCQPSPEW--PCAPGRKYYGRGPIQLSFNFNYGPAGRAIGVDLLSNPDLVATDATVSFKTALWFWMTP-QGNKPSSHDVITGRWAPSPADAAAGRAPGYGVITNIVNGGLECGHGPDDRVANRIGFYQRYCGAFGIG---TGGN--LDCYNQRPFN 330          
BLAST of BQ623006 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 5.547e-30
Identity = 60/162 (37.04%), Postives = 91/162 (56.17%), Query Frame = 3
Query:    9 EMSPNQIYCDDDFKYTYPCTPGVSYHGRGALPLYWNYNYGETGEALKVDILNHPEYIENNATLAFQAAMWRWMTPVKKHQPSAHDAFVGNWKPTKNDTLAKRVHGFGTTMNVLYGDQVCGKGDDESMNNMISHYLYYLDLMGVGREEAGPNEVLSCGEQEPF 494
            E +  ++YC       +PC PG  Y+GRG + L  NYNYG  G+A+K D++N+P+ +  N T++F+ A+W WMTP + ++PS+HD   G W P+  D+ A RV G+G   N++ G   CG G D  +++ +  Y  Y  + GV      P   L C  Q  F
Sbjct:  167 EQNTQEVYCSPK---DWPCAPGKKYYGRGPIQLTHNYNYGLAGQAIKEDLINNPDLLSTNPTVSFKTAIWFWMTP-QANKPSSHDVITGRWTPSAADSSAGRVPGYGVITNIINGGIECGHGQDNRVDDRVGFYKRYCQIFGV-----DPGGNLDCNNQRSF 319          
BLAST of BQ623006 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.244e-30
Identity = 62/164 (37.80%), Postives = 90/164 (54.88%), Query Frame = 3
Query:    3 NKEMSPNQIYCDDDFKYTYPCTPGVSYHGRGALPLYWNYNYGETGEALKVDILNHPEYIENNATLAFQAAMWRWMTPVKKHQPSAHDAFVGNWKPTKNDTLAKRVHGFGTTMNVLYGDQVCGKGDDESMNNMISHYLYYLDLMGVGREEAGPNEVLSCGEQEPF 494
            N+E      YC    ++  PC PG  Y GRG + + +NYNYG  G A+ V++LN+P+ + N+A ++F+ A+W WMT  ++ +PSAHD   G W P+  D+   RV GFG   N++ G   C  G +  M+N I  Y  Y  ++GV      P   L C  Q PF
Sbjct:   90 NREQGSPGDYCASSQQW--PCAPGKKYFGRGPIQISYNYNYGAAGSAIGVNLLNNPDLVANDAVVSFKTALWFWMT-AQQPKPSAHDVITGRWSPSVADSAPGRVPGFGVITNIINGGMECNSGSNALMDNRIGFYRRYCQILGV-----DPGNNLDCANQRPF 245          
BLAST of BQ623006 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 7.244e-30
Identity = 57/146 (39.04%), Postives = 85/146 (58.22%), Query Frame = 3
Query:   57 YPCTPGVSYHGRGALPLYWNYNYGETGEALKVDILNHPEYIENNATLAFQAAMWRWMTPVKKHQPSAHDAFVGNWKPTKNDTLAKRVHGFGTTMNVLYGDQVCGKGDDESMNNMISHYLYYLDLMGVGREEAGPNEVLSCGEQEPF 494
            +PC PG  Y GRG + +  NYNYG  G A+ VD+LN+P+ +  +  ++F++A+W WMTP +  +PS HD  +G W+P+  D  A R+ GFG   N++ G   CG+G D  + + I  Y  Y  ++GV      P + L CG Q  F
Sbjct:  181 WPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSALWFWMTP-QSPKPSCHDVIIGRWQPSAGDRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFYRRYCSILGV-----SPGDNLDCGNQRSF 320          
BLAST of BQ623006 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 9.461e-30
Identity = 63/162 (38.89%), Postives = 85/162 (52.47%), Query Frame = 3
Query:    9 EMSPNQIYCDDDFKYTYPCTPGVSYHGRGALPLYWNYNYGETGEALKVDILNHPEYIENNATLAFQAAMWRWMTPVKKHQPSAHDAFVGNWKPTKNDTLAKRVHGFGTTMNVLYGDQVCGKGDDESMNNMISHYLYYLDLMGVGREEAGPNEVLSCGEQEPF 494
            E++PN  YCD   K +YPC     Y+GRG L L WNYNYGE G  L  ++L+ PE +  +  L+F+AA+W WM P     PS H+   G W P++ D  A R  GFG   N++     C K       N I +YL Y D++     +  P + L C  QE F
Sbjct:  150 ELNPNSDYCDPKTKSSYPCV--ADYYGRGPLQLRWNYNYGECGNYLGQNLLDEPEKVATDPVLSFEAALWFWMNPHSTGAPSCHEVITGEWSPSEADIEAGRKPGFGMLTNIITNGGECTKDGKTRQQNRIDYYLRYCDML-----QVDPGDNLYCDNQETF 304          
BLAST of BQ623006 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 9.461e-30
Identity = 57/146 (39.04%), Postives = 85/146 (58.22%), Query Frame = 3
Query:   57 YPCTPGVSYHGRGALPLYWNYNYGETGEALKVDILNHPEYIENNATLAFQAAMWRWMTPVKKHQPSAHDAFVGNWKPTKNDTLAKRVHGFGTTMNVLYGDQVCGKGDDESMNNMISHYLYYLDLMGVGREEAGPNEVLSCGEQEPF 494
            +PC PG  Y GRG + +  NYNYG  G A+ VD+LN+P+ +  +  ++F++A+W WMTP +  +PS HD  +G W+P+  D  A R+ GFG   N++ G   CG+G D  + + I  Y  Y  ++GV      P + L CG Q  F
Sbjct:  176 WPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSALWFWMTP-QSPKPSCHDVIIGRWQPSSADRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFYRRYCSILGV-----SPGDNLDCGNQRSF 315          
BLAST of BQ623006 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3)

HSP 1 Score: 129.413 bits (324), Expect = 1.614e-29
Identity = 63/163 (38.65%), Postives = 91/163 (55.83%), Query Frame = 3
Query:    6 KEMSPNQIYCDDDFKYTYPCTPGVSYHGRGALPLYWNYNYGETGEALKVDILNHPEYIENNATLAFQAAMWRWMTPVKKHQPSAHDAFVGNWKPTKNDTLAKRVHGFGTTMNVLYGDQVCGKGDDESMNNMISHYLYYLDLMGVGREEAGPNEVLSCGEQEPF 494
            +E +P   YC+     T+PC  G  Y+GRG + L WNYNYG  G A+ VD+LN+P+ + N+A +AF+AA+W WMT  +  +PS H    G W+P+  D  A R+ G+G   N++ G   CG+G D  + + I  Y  Y ++ GV      P   L C  Q  F
Sbjct:  172 QEQNPASDYCEPSA--TWPCASGKRYYGRGPMQLSWNYNYGLCGRAIGVDLLNNPDLVANDAVIAFKAAIWFWMT-AQPPKPSCHAVIAGQWQPSDADRAAGRLPGYGVITNIINGGLECGRGQDGRVADRIGFYQRYCNIFGV-----NPGGNLDCYNQRSF 326          
BLAST of BQ623006 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.108e-29
Identity = 59/146 (40.41%), Postives = 83/146 (56.85%), Query Frame = 3
Query:   57 YPCTPGVSYHGRGALPLYWNYNYGETGEALKVDILNHPEYIENNATLAFQAAMWRWMTPVKKHQPSAHDAFVGNWKPTKNDTLAKRVHGFGTTMNVLYGDQVCGKGDDESMNNMISHYLYYLDLMGVGREEAGPNEVLSCGEQEPF 494
            +PC PG  Y GRG + +  NYNYG  G A+ VD+LN+P+ +  +  ++F++A+W WMTP +  +PS HD   G W+P+  D  A RV GFG   N++ G   CG G D  + + I  Y  Y  ++GV      P E L CG Q  F
Sbjct:  174 WPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSAIWFWMTP-QSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGV-----SPGENLDCGNQRSF 313          
BLAST of BQ623006 vs. ExPASy Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.108e-29
Identity = 58/146 (39.73%), Postives = 84/146 (57.53%), Query Frame = 3
Query:   57 YPCTPGVSYHGRGALPLYWNYNYGETGEALKVDILNHPEYIENNATLAFQAAMWRWMTPVKKHQPSAHDAFVGNWKPTKNDTLAKRVHGFGTTMNVLYGDQVCGKGDDESMNNMISHYLYYLDLMGVGREEAGPNEVLSCGEQEPF 494
            +PC PG  Y GRG + +  NYNYG  G A+ VD+LN+P+ +  ++ ++F++A+W WMTP +  +PS HD   G W+P+  D  A RV GFG   N++ G   CG G D  + + I  Y  Y  ++GV      P + L CG Q  F
Sbjct:  168 WPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSIISFKSAIWFWMTP-QSPKPSCHDVITGRWQPSGTDQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGV-----SPGDNLDCGNQRSF 307          
BLAST of BQ623006 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.753e-29
Identity = 58/146 (39.73%), Postives = 84/146 (57.53%), Query Frame = 3
Query:   57 YPCTPGVSYHGRGALPLYWNYNYGETGEALKVDILNHPEYIENNATLAFQAAMWRWMTPVKKHQPSAHDAFVGNWKPTKNDTLAKRVHGFGTTMNVLYGDQVCGKGDDESMNNMISHYLYYLDLMGVGREEAGPNEVLSCGEQEPF 494
            +PC PG  Y GRG + +  NYNYG  G A+ VD+LN+P+ +  ++ ++F++A+W WMTP +  +PS HD   G W+P+  D  A RV GFG   N++ G   CG G D  + + I  Y  Y  ++GV      P + L CG Q  F
Sbjct:  170 WPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTP-QSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGV-----SPGDNLDCGNQRSF 309          
The following BLAST results are available for this feature:
BLAST of BQ623006 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
CHI2_ORYSJ2.490e-3039.02Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHIX_PEA5.547e-3037.04Endochitinase OS=Pisum sativum PE=2 SV=1[more]
CHID_SOLLC7.244e-3037.80Basic endochitinase (Fragment) OS=Solanum lycopers... [more]
CHI1_TOBAC7.244e-3039.04Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1... [more]
CHI8_POPTR9.461e-3038.89Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 ... [more]
CHI2_TOBAC9.461e-3039.04Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1... [more]
CHIB_ARATH1.614e-2938.65Basic endochitinase B OS=Arabidopsis thaliana GN=C... [more]
CHIC_SOLLC2.108e-2940.41Basic 30 kDa endochitinase OS=Solanum lycopersicum... [more]
CHI2_SOLTU2.108e-2939.73Endochitinase 2 (Fragment) OS=Solanum tuberosum GN... [more]
CHI3_SOLTU2.753e-2939.73Endochitinase 3 (Fragment) OS=Solanum tuberosum GN... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00097 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00097 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623006 ID=BQ623006; Name=BQ623006; organism=Citrus sinensis; type=EST; length=664bp
ACAACAAGGAGATGAGTCCTAACCAGATATACTGTGATGATGACTTCAAA
TACACATATCCTTGCACTCCTGGAGTTTCATATCATGGCCGCGGTGCCTT
GCCCCTCTACTGGAACTACAACTATGGGGAAACAGGAGAAGCCCTAAAAG
TTGATATATTGAACCACCCAGAGTACATAGAAAACAATGCGACCCTAGCC
TTTCAGGCAGCAATGTGGAGGTGGATGACTCCAGTGAAGAAGCATCAGCC
GTCGGCGCACGACGCGTTCGTTGGTAACTGGAAGCCTACCAAGAATGACA
CATTGGCCAAAAGGGTGCATGGATTTGGCACCACCATGAATGTTCTTTAT
GGTGACCAAGTTTGTGGCAAGGGTGATGACGAGTCAATGAACAACATGAT
CTCACATTATCTGTACTATCTTGATTTGATGGGCGTTGGCCGTGAGGAAG
CAGGTCCGAATGAAGTGCTCAGCTGCGGCGAGCAGGAGCCGTTCAATCCA
TCATCTCCTTCATCATCATCGTCATCCTCTTCGTTATCTTCTTGAGTGAT
TCCTTTTTTGAGATAATGCATTATATAATATACATATATAGTGAATGAAA
AATATTAACATCAAGTTTGATGTTGGGTGATCATCATGCTTGACTGCTAT
ATGTGTTATTGCAT
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