BQ623013

Overview
NameBQ623013
Unique NameBQ623013
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length482
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7350 contig Csv1_Contig7350:313..794. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Match: TDXH_HYPBU (Probable peroxiredoxin OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=Hbut_0228 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 3.992e-13
Identity = 45/146 (30.82%), Postives = 75/146 (51.37%), Query Frame = 2
Query:   11 PSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLPS 430
            P   +    G+      F+GK  V++ +PAD TP CT +  AF   YE FKK   E+IG+S D + SH  +A+  +      +P+ +++D   +V K+ G+      +   R  +V+D  GVV+ I     +  ++IDE L+ + S
Sbjct:   13 PEIEVMTTHGKIKLPDHFRGKWFVLFSHPADFTPVCTTEFVAFAKRYEDFKKLNTELIGLSVDSTFSHIKWAEWIKEKLGVEIPFPIIADPTGEVAKKLGLLHAQSSTATVRAVFVVDDKGVVRAILYYPQEVGRNIDEILRLIES 158          
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Match: BAS1_SPIOL (2-Cys peroxiredoxin BAS1, chloroplastic OS=Spinacia oleracea GN=BAS1 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 5.214e-13
Identity = 49/140 (35.00%), Postives = 73/140 (52.14%), Query Frame = 2
Query:   29 DQEGRNVSLSKFKGKP-VVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFL 424
            DQE   V LS + GK  V+++FYP D T  C  +  AF D + +F+K   EV+G+S D   SH A+ +  R       L Y L+SD    + K +GV     G +  R  +++DK GV+Q    N     + +DET++ L
Sbjct:   89 DQEFIKVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRHSEFEKLNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLISDVTKSISKSFGVLIHDQG-IALRGLFIIDKEGVIQHSTINNLGIGRSVDETMRTL 227          
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Match: BAS1A_ARATH (2-Cys peroxiredoxin BAS1, chloroplastic OS=Arabidopsis thaliana GN=BAS1 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 5.214e-13
Identity = 49/140 (35.00%), Postives = 73/140 (52.14%), Query Frame = 2
Query:   29 DQEGRNVSLSKFKGKP-VVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFL 424
            DQE   V LS + GK  V+++FYP D T  C  +  AF D + +F+K   EV+G+S D   SH A+ +  R       L Y L+SD    + K +GV     G +  R  +++DK GV+Q    N     + +DET++ L
Sbjct:   89 DQEFIKVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRHSEFEKLNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLISDVTKSISKSFGVLIHDQG-IALRGLFIIDKEGVIQHSTINNLGIGRSVDETMRTL 227          
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Match: TDXH_THEP1 (Probable peroxiredoxin OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=Tpet_0121 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 8.894e-13
Identity = 42/150 (28.00%), Postives = 80/150 (53.33%), Query Frame = 2
Query:   11 PSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLPSS*TS 442
            P   +K   G+ +    F+GK  V++ +PAD TP CT +  AF+  Y++FKK   E+IG+S D   SH  + +  +      + + +++D+  +V +  G+     G+   R  +++D NG+++ I     +  ++IDE L+ + +  TS
Sbjct:   13 PRLEVKTTHGKKILPDDFRGKWFVLFSHPADFTPVCTTEFVAFQKRYDEFKKLNTELIGLSIDQVFSHIKWIEWIKEKLGVEIEFPVIADDLGEVSRRLGLIHPSKGTNTVRAVFIVDPNGIIRAIVYYPQEVGRNIDEILRAVRALQTS 162          
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Match: YCF42_PORYE (Putative peroxiredoxin ycf42 OS=Porphyra yezoensis GN=ycf42 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.162e-12
Identity = 47/151 (31.13%), Postives = 75/151 (49.67%), Query Frame = 2
Query:    2 QAPPSFT---LKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFL 424
            Q  P F+   + DQE + + LS  K K +V++FYP D T  C  +  AF D Y  F +   EV+G+S D   SH A+ +  R       L Y L+SD   ++   + V      +L G   +++D  G++Q    N  +  + ++ETL+ L
Sbjct:   12 QLAPDFSATAVYDQEFKTLKLSDLKNKYIVLFFYPLDFTFVCPTEITAFSDKYNAFSELNTEVLGVSVDSEYSHLAWLQTDRESGGLGDLSYPLVSDLKKEISAAYNVLNSDGVALRG--LFIIDPKGIIQYSTINNLEFGRSVEETLRVL 160          
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Match: TDXH2_THEAC (Probable peroxiredoxin 2 OS=Thermoplasma acidophilum GN=Ta0954 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.162e-12
Identity = 40/147 (27.21%), Postives = 83/147 (56.46%), Query Frame = 2
Query:    2 QAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFL 424
            Q  P FT+   +G  V+LS ++GK V+++ +P D TP CT +  AF + Y+ F+  G E++G+S D   SH A+ +  +      +P+ +++D   +V +++ +  +  G+   R  +++D N +V+ +     +  ++IDE ++ +
Sbjct:    3 QKAPDFTVNTSKGP-VTLSSYRGKWVLLFSHPGDFTPVCTTEFIAFTERYKDFQALGVELLGLSIDSVYSHIAWIRDIKEHFGIEIPFPIIADIDKEVARQYNLIDEKSGATV-RGVFIIDPNQIVRWMIYYPAETGRNIDEIIRVI 147          
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Match: PRDX3_MOUSE (Thioredoxin-dependent peroxide reductase, mitochondrial OS=Mus musculus GN=Prdx3 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.162e-12
Identity = 44/137 (32.12%), Postives = 72/137 (52.55%), Query Frame = 2
Query:   35 EGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFL 424
            E + +SL  FKGK +V++FYP D T  C  +  AF D   +F     EV+ +S D   SH A+    R       +  TLLSD   ++ +++GV  +  G +  R  +++D NGVV+ +  N     + ++ETL+ +
Sbjct:   82 EFKELSLDDFKGKYLVLFFYPLDFTFVCPTEIVAFSDKANEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNITLLSDITKQISRDYGVLLESAG-IALRGLFIIDPNGVVKHLSVNDLPVGRSVEETLRLV 217          
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Match: TDXH_STAMF (Probable peroxiredoxin OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=Smar_0058 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.517e-12
Identity = 43/144 (29.86%), Postives = 72/144 (50.00%), Query Frame = 2
Query:   11 PSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFL 424
            P   +  Q G+      FKGK  V++ +PAD TP CT +  AF   YE FKK   E+IG+S D + SH  + +  +      +P+ +++D    V  + G+      +   R  +V+D NG+++ I        ++IDE L+ +
Sbjct:   13 PEMEVVTQHGKIKLPDYFKGKYWVLFSHPADFTPVCTTEFVAFAKRYEDFKKLNTELIGLSVDSNFSHIKWIEWIKEKLGVEIPFPIMADPRGTVASKLGMLHAASSTHTVRAVFVIDPNGIIRAIIYYPLDNGRNIDEILRLV 156          
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Match: TDXH_IGNH4 (Probable peroxiredoxin OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=Igni_0459 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.517e-12
Identity = 44/144 (30.56%), Postives = 73/144 (50.69%), Query Frame = 2
Query:   11 PSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSH---KAFAKK---YRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFL 424
            P   +    G       +KGK +V++ +PAD TP CT +  AF   YE FKK   E++G+S D+S SH   K + K+     +P+ +++D   +V  + G+     G +  R  +++D  G V+ I        ++IDE L+ L
Sbjct:   13 PEMVVHTDHGPKKLPDDYKGKWLVIFSHPADFTPVCTTEFVAFAKRYEDFKKLNTELLGLSVDNSFSHIKWKEWIKEKLNVEIPFPIIADPLGQVATKLGMLHPEGGVVTVRAVFIVDPEGKVRAILYYPLNVGRNIDEILRLL 156          
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Match: PRDX2_MOUSE (Peroxiredoxin-2 OS=Mus musculus GN=Prdx2 PE=1 SV=3)

HSP 1 Score: 72.0182 bits (175), Expect = 1.517e-12
Identity = 47/151 (31.13%), Postives = 77/151 (50.99%), Query Frame = 2
Query:    2 QAPPSFT---LKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFL 424
            ++ P FT   + D   + + LS ++GK VV++FYP D T  C  +  AF D  E F+K G EV+G+S D   +H A+    R       L   LL+D    + + +GV  +  G +  R  +++D  GV++ I  N     + +DE L+ +
Sbjct:   10 KSAPDFTATAVVDGAFKEIKLSDYRGKYVVLFFYPLDFTFVCPTEIIAFSDHAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTKSLSQNYGVLKNDEG-IAYRGLFIIDAKGVLRQITVNDLPVGRSVDEALRLV 159          
The following BLAST results are available for this feature:
BLAST of BQ623013 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
TDXH_HYPBU3.992e-1330.82Probable peroxiredoxin OS=Hyperthermus butylicus (... [more]
BAS1_SPIOL5.214e-1335.002-Cys peroxiredoxin BAS1, chloroplastic OS=Spinaci... [more]
BAS1A_ARATH5.214e-1335.002-Cys peroxiredoxin BAS1, chloroplastic OS=Arabido... [more]
TDXH_THEP18.894e-1328.00Probable peroxiredoxin OS=Thermotoga petrophila (s... [more]
YCF42_PORYE1.162e-1231.13Putative peroxiredoxin ycf42 OS=Porphyra yezoensis... [more]
TDXH2_THEAC1.162e-1227.21Probable peroxiredoxin 2 OS=Thermoplasma acidophil... [more]
PRDX3_MOUSE1.162e-1232.12Thioredoxin-dependent peroxide reductase, mitochon... [more]
TDXH_STAMF1.517e-1229.86Probable peroxiredoxin OS=Staphylothermus marinus ... [more]
TDXH_IGNH41.517e-1230.56Probable peroxiredoxin OS=Ignicoccus hospitalis (s... [more]
PRDX2_MOUSE1.517e-1231.13Peroxiredoxin-2 OS=Mus musculus GN=Prdx2 PE=1 SV=3[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00104 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00104 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623013 ID=BQ623013; Name=BQ623013; organism=Citrus sinensis; type=EST; length=482bp
ACAGGCGCCTCCTTCCTTCACATTGAAAGATCAAGAGGGCAGGAATGTGA
GCCTATCCAAGTTTAAAGGGAAGCCCGTGGTTGTTTATTTTTACCCTGCT
GATGAGACACCTGGCTGCACCAAACAGGCATGCGCTTTTAGGGATTCTTA
TGAGAAATTTAAGAAAGCAGGAGCTGAGGTTATTGGGATTAGTGGTGATG
ATTCATCGTCACACAAGGCATTTGCAAAAAAGTATAGGCTTCCATATACA
TTGCTGAGCGACGAGGGTAACAAGGTGAGGAAAGAATGGGGGGTTCCAGC
AGACTTCTTTGGATCATTGCCTGGGAGACAGACTTACGTTCTTGACAAGA
ATGGAGTGGTTCAGCTCATCTACAACAACCAGTTCCAACCTGAAAAACAC
ATTGATGAGACCTTGAAGTTTCTTCCAAGTAGTTGAACATCTCAATGTAT
TGCCTTGTTCATGCTTGATTACAAATCCTCTG
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