BQ623016

Overview
NameBQ623016
Unique NameBQ623016
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length641
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_DESOH (60 kDa chaperonin OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=groL PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 3.863e-57
Identity = 107/213 (50.23%), Postives = 156/213 (73.24%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A++KVG +GV+                GM+ DRGY+SP FVT+ EK++V  ENA +L+ ++K+S +K+++P+LE+T +   PLLIIAED+ GEALATLVVNKLRG LNVAA+KAPGFG+RRKA+L+DIA +TG +  + D+G+ +E  ++  LG A+++TI KD+TTI+  A  K +I+ R+ Q++ ++ +T S YD EKL ER+AKL GGV
Sbjct:  164 EAMEKVGKEGVITVEEAKSMDTTLDVVEGMQFDRGYLSPYFVTDAEKMVVSLENAYILINEKKLSNMKELLPILEQTAKAGRPLLIIAEDIEGEALATLVVNKLRGTLNVAAVKAPGFGDRRKAMLEDIATLTGGQVVSEDVGINLEGITLGDLGHAKRITIDKDNTTIVDGAGKKADIEGRVKQIRAQIEDTTSDYDREKLQERLAKLVGGV 376          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_AGRVS (60 kDa chaperonin OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=groL PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 3.863e-57
Identity = 109/213 (51.17%), Postives = 155/213 (72.77%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A+ KVG +GV+                GM+ DRGY+SP FVTNPEK++ + E+A VL+ ++K+S ++ ++P+LE   Q   PL+IIAEDV GEALATLVVNKLRG L +AA+KAPGFG+RRKA+L+DIAI+TG    + DLG+ +E  +++ LG A+K++I K++TTI+  A  K +I+ R+AQ+K ++ ET S YD EKL ER+AKL+GGV
Sbjct:  164 EAMQKVGNEGVITVEEAKTAETELEVVEGMQFDRGYLSPYFVTNPEKMVADLEDAYVLLHEKKLSNLQAMLPVLEAVVQTGKPLVIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTVISEDLGIKLETVTLDMLGRAKKISITKENTTIVDGAGQKSDIEGRVAQIKAQIEETSSDYDREKLQERLAKLAGGV 376          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH605_RHILO (60 kDa chaperonin 5 OS=Rhizobium loti GN=groL5 PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 3.863e-57
Identity = 109/213 (51.17%), Postives = 155/213 (72.77%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A+ KVG +GV+                GM+ DRGY+SP FVTN +K++ + E+A +L+ ++K+S ++ ++P+LE   Q   PL+II+EDV GEALATLVVNKLRG L +AA+KAPGFG+RRKA+L+DIAI+TG +  + DLG+ +EN  +  LG A+KV+I K++TTI+  A  K EIQ R+AQ+K+++ ET S YD EKL ER+AKL+GGV
Sbjct:  164 EAMQKVGNEGVITVEEAKTAETELEVVEGMQFDRGYLSPYFVTNADKMVADLEDAYILLHEKKLSNLQAMLPILEAVVQTSKPLVIISEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGQVISEDLGIKLENVGLNMLGRAKKVSISKENTTIVDGAGKKAEIQGRVAQIKQQIEETTSDYDKEKLQERLAKLAGGV 376          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH601_SYNJB (60 kDa chaperonin 1 OS=Synechococcus sp. GN=groL1 PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 3.863e-57
Identity = 109/213 (51.17%), Postives = 156/213 (73.24%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A+DKVG +GV+                GM  D+GYISP FVT+ E++    EN  +L+TD+KI+ ++D++P+LE+  +   PLLIIAED+  EALATLVVNKLRG+L+V A+KAPGFG+RRKA+L+DIAI+TG E  + + GL +EN  ++  GTAR+VT+ KD+TTI+A+  ++  ++AR  Q+++++ ETDS YD EKL ER+AKLSGGV
Sbjct:  163 EAMDKVGREGVISLEEGKSMTTELEVTEGMRFDKGYISPYFVTDTERMEAVLENPYILITDKKITLVQDLVPVLEQVARAGRPLLIIAEDIEKEALATLVVNKLRGVLSVVAVKAPGFGDRRKAMLEDIAILTGGEVISEERGLKLENARLDSFGTARRVTVTKDNTTIVAE-GNEAAVKARCEQIRRQIEETDSTYDKEKLQERLAKLSGGV 374          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH601_NITWN (60 kDa chaperonin 1 OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=groL1 PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 3.863e-57
Identity = 113/213 (53.05%), Postives = 153/213 (71.83%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A+ KVG +GV+                GM+ DRGY+SP FVT+ EK+ VEFE+  VL+ ++K+S ++ ++PLLE   Q   PLL+IAEDV GEALATLVVNKLRG L VAA+KAPGFG+RRKA+L+DIAI+TG    + DLG+ +EN ++  LG A+KV I K++TTI+  A  K +I+AR+ Q+K ++ ET S YD EKL ER+AKL+GGV
Sbjct:  164 EAMQKVGNEGVITVEEAKSLETELEVVEGMQFDRGYVSPYFVTDAEKMRVEFEDPYVLIHEKKLSGLQAMVPLLESVVQSGKPLLVIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGTAISEDLGIKLENVTLNMLGRAKKVVIDKENTTIVDGAGRKKDIEARVTQIKAQIEETTSDYDREKLQERLAKLAGGV 376          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_RHILW (60 kDa chaperonin OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=groL PE=3 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 5.045e-57
Identity = 109/213 (51.17%), Postives = 156/213 (73.24%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A+ KVG +GV+                GM+ DRGY+SP FVTNPEK+I + E+  +L+ ++K+S ++ ++P+LE   Q   PLLIIAEDV GEALATLVVNKLRG L +AA+KAPGFG+RRKA+L+DIAI+TG    + DLG+ +E+ +++ LG A+KV+I K++TTI+  + +K +I+ R+AQ+K ++ ET S YD EKL ER+AKL+GGV
Sbjct:  164 EAMQKVGNEGVITVEEAKTAETELEVVEGMQFDRGYLSPYFVTNPEKMIADLEDVFILLHEKKLSNLQSMLPVLEAVVQTGKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTVISEDLGIKLESVTLDMLGRAKKVSISKENTTIVDGSGAKSDIEGRVAQIKAQIEETTSDYDREKLQERLAKLAGGV 376          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_PSEMY (60 kDa chaperonin OS=Pseudomonas mendocina (strain ymp) GN=groL PE=3 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 5.045e-57
Identity = 107/213 (50.23%), Postives = 155/213 (72.77%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A+DKVG +GV+                GM+ DRGY+SP F+  P+ ++ E E   +L+ D+KIS I++++P+LE   +   PLLI+AEDV GEALATLVVN +RGI+ VAA+KAPGFG+RRKA+LQDIAI+TG    + ++GL +E+ ++E LG A++V + KD+TTII  A ++ +I+AR+AQ++K++ ET S YD EKL ER+AKL+GGV
Sbjct:  164 EAMDKVGKEGVITVEEGSGLENELSVVEGMQFDRGYLSPYFINKPDTMVAELEGPLLLLVDKKISNIRELLPVLEAVAKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTVISEEVGLSLESATLEHLGNAKRVVLNKDNTTIIDGAGAQADIEARVAQIRKQVEETSSDYDKEKLQERLAKLAGGV 376          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_NOVAD (60 kDa chaperonin OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=groL PE=3 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 5.045e-57
Identity = 110/213 (51.64%), Postives = 154/213 (72.30%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A++KVG +GV+                GM+ DRGY+SP F+TNPEK+ VE EN  +L+ ++K+S+++ ++P+LE   Q   PLLIIAED+ GEALATLVVNKLRG L +AA+KAPGFG+RRKA+L DIA +T  E  + DLG+ +E+ ++  LG A+KVTI KD+TTI+  A S +EI+AR+ Q++ ++  T S YD EKL ER+AKL+GGV
Sbjct:  164 EAMEKVGKEGVITVEEAKGLEFELDVVEGMQFDRGYLSPYFITNPEKMTVELENPYILIHEKKLSSLQAMLPILEAVVQSGRPLLIIAEDIEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLGDIATLTAGEMISEDLGIKLESVTLAMLGQAKKVTIDKDNTTIVDGAGSAEEIKARVEQIRAQIEVTTSDYDREKLQERLAKLAGGV 376          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_ACIBL (60 kDa chaperonin OS=Acidobacteria bacterium (strain Ellin345) GN=groL PE=3 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 5.045e-57
Identity = 110/213 (51.64%), Postives = 153/213 (71.83%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A+ KVG DGV+                GM+ DRGY+SP FVT+PE++    EN  +L+ ++K+S++KD++PLLE+  +   PL+IIAEDV GEALATLVVNKLRG LNVAA+KAPGFG+RRKA+LQDIAI+TG +    DLG+ +EN  ++ LG+A+KVTI KD+TTI+       +I+ R+ +++ ++ +T S YD EKL ER+AKL GGV
Sbjct:  173 EAMKKVGKDGVITVEESKTMETQLEVVEGMQFDRGYLSPYFVTDPERMEAVLENPYILIHEKKVSSMKDLLPLLEQIAKGGRPLVIIAEDVEGEALATLVVNKLRGTLNVAAVKAPGFGDRRKAMLQDIAILTGGKAITEDLGIKLENVHMDDLGSAKKVTIDKDNTTIVEGKGKSSDIEGRVKEIRSQVEKTTSDYDREKLQERLAKLVGGV 385          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH602_SYNPW (60 kDa chaperonin 2 OS=Synechococcus sp. (strain WH7803) GN=groL2 PE=3 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 5.045e-57
Identity = 109/213 (51.17%), Postives = 153/213 (71.83%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            DA+DKVG +GV+                GM  D+GYISP F T+ E++    +   +L+TD+KI  ++D++P+LE+  +   PLLIIAED+  EALATLVVN+LRG+LNVAA+KAPGFG+RRKA+L+D+A++T  +    D GL +EN  +E LGTAR+VTI KD+TTI+A+  ++  +QAR  Q+KK++ ET+S YD EKL ER+AKL+GGV
Sbjct:  163 DAMDKVGKEGVISLEEGKSMTTELEVTEGMRFDKGYISPYFATDTERMEAVLDEPYILLTDKKIGLVQDLVPVLEQIARTGKPLLIIAEDIEKEALATLVVNRLRGVLNVAAVKAPGFGDRRKAMLEDMAVLTNGQLITEDAGLKLENAKIEMLGTARRVTINKDTTTIVAE-GNEVAVQARCEQIKKQMDETESTYDKEKLQERLAKLAGGV 374          
The following BLAST results are available for this feature:
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_DESOH3.863e-5750.2360 kDa chaperonin OS=Desulfococcus oleovorans (str... [more]
CH60_AGRVS3.863e-5751.1760 kDa chaperonin OS=Agrobacterium vitis (strain S... [more]
CH605_RHILO3.863e-5751.1760 kDa chaperonin 5 OS=Rhizobium loti GN=groL5 PE=... [more]
CH601_SYNJB3.863e-5751.1760 kDa chaperonin 1 OS=Synechococcus sp. GN=groL1 ... [more]
CH601_NITWN3.863e-5753.0560 kDa chaperonin 1 OS=Nitrobacter winogradskyi (s... [more]
CH60_RHILW5.045e-5751.1760 kDa chaperonin OS=Rhizobium leguminosarum bv. t... [more]
CH60_PSEMY5.045e-5750.2360 kDa chaperonin OS=Pseudomonas mendocina (strain... [more]
CH60_NOVAD5.045e-5751.6460 kDa chaperonin OS=Novosphingobium aromaticivora... [more]
CH60_ACIBL5.045e-5751.6460 kDa chaperonin OS=Acidobacteria bacterium (stra... [more]
CH602_SYNPW5.045e-5751.1760 kDa chaperonin 2 OS=Synechococcus sp. (strain W... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00107 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00107 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623016 ID=BQ623016; Name=BQ623016; organism=Citrus sinensis; type=EST; length=641bp
CCGATGCAATTGACAAGGTTGGTCCTGATGGCGTCTTGTCAATCGAGTCA
TCATCATCATTTGAGACTACTGTTGAAGTTGAGGAAGGAATGGAGATTGA
CAGGGGTTACATCTCTCCTCAGTTTGTCACAAACCCTGAGAAATTAATTG
TTGAATTTGAGAATGCTAGAGTGCTGGTCACGGATCAAAAAATTTCAGCA
ATAAAGGATATAATTCCCTTGTTAGAGAAGACCACACAATTGAGAGCACC
ATTGCTTATAATTGCTGAGGATGTCACAGGAGAGGCTTTGGCTACGTTAG
TCGTCAACAAGCTCAGGGGCATCCTTAATGTTGCTGCCATTAAAGCTCCT
GGTTTTGGCGAAAGAAGAAAAGCTCTCCTTCAAGATATTGCCATTGTGAC
TGGAGCTGAGTTTCAAGCTGGAGACCTGGGCTTGCTTATTGAAAACACTT
CAGTTGAGCAGCTAGGTACAGCTAGAAAGGTGACCATCAGAAAGGACTCC
ACTACCATTATTGCTGATGCTGCATCAAAGGATGAAATACAAGCTAGAAT
TGCACAGCTGAAAAAGGAGTTGGCTGAGACGGATTCTGTTTATGACTCAG
AGAAACTTGCTGAGAGAATTGCTAAATTGTCTGGCGGGGTT
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