BQ623016

Overview
NameBQ623016
Unique NameBQ623016
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length641
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH602_STRAW (60 kDa chaperonin 2 OS=Streptomyces avermitilis GN=groL2 PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.794e-54
Identity = 107/213 (50.23%), Postives = 146/213 (68.54%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A+DKVG +GV+                GM  D+GYIS  F T+ E++    ++  +L+ + KIS++KD++PLLEK  Q   PLLIIAEDV GEAL+TLVVNK+RG     A+KAPGFG+RRKA+L DIAI+TG E  + ++GL +EN S++ LG ARKV I KD TTI+  A S D++  R+ Q++ E+  +DS YD EKL ER+AKL+GGV
Sbjct:  162 EAMDKVGKEGVITVEESQTFGLELELTEGMRFDKGYISAYFATDMERMEASLDDPYILIANSKISSVKDLLPLLEKVMQSGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLGDIAILTGGEVISEEVGLKLENASIDLLGRARKVVITKDETTIVDGAGSADQVAGRVNQIRAEIENSDSDYDREKLQERLAKLAGGV 374          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH602_CHRVO (60 kDa chaperonin 2 OS=Chromobacterium violaceum GN=groL2 PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.794e-54
Identity = 106/213 (49.77%), Postives = 150/213 (70.42%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A++KVG +GV+                GM+ DRGY+SP F+ N +K I   +N  +L+ D+KIS I+D++P+LE+  +   PLLIIAEDV GEALATLVVN +RGIL V A+KAPGFG+RRKA+L DIA++TG E  A ++GL +E  +++QLG A++V + K++TTII  A     IQAR+ +++K++ E  S YD EKL ER+AKL+GGV
Sbjct:  164 NAMEKVGKEGVITVEDGKSLNNELDVVEGMQFDRGYLSPYFINNQDKQIAALDNPFILLFDKKISNIRDLLPVLEQVAKSGRPLLIIAEDVEGEALATLVVNTIRGILKVVAVKAPGFGDRRKAMLTDIAVLTGGEVIAEEVGLTLEKATLDQLGQAKRVEVGKENTTIIDGAGEAATIQARVGEIRKQIEEATSDYDREKLQERVAKLAGGV 376          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH601_STRAW (60 kDa chaperonin 1 OS=Streptomyces avermitilis GN=groL1 PE=3 SV=3)

HSP 1 Score: 212.231 bits (539), Expect = 1.794e-54
Identity = 110/215 (51.16%), Postives = 147/215 (68.37%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRA--PLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A+DKVG DGV+                GM  D+GY+SP FVT+ E++    E+  +L+   KIS+I+D++PLLEK  Q  A  PLLIIAEDV GEAL+TLVVNK+RG  N  A+KAPGFG+RRKA+L DIA +TG +  A ++GL ++   ++ LGTAR+VT+ KD TTI+    S DE+  RI Q+K E+  TDS +D EKL ER+AKL+GGV
Sbjct:  162 EAMDKVGKDGVITVEESNTFGLELDFTEGMAFDKGYLSPYFVTDQERMEAVLEDPYILIHQGKISSIQDLLPLLEKVIQANASKPLLIIAEDVEGEALSTLVVNKIRGTFNAVAVKAPGFGDRRKAMLGDIATLTGGQVIAEEVGLKLDQVGLDVLGTARRVTVTKDDTTIVDGGGSSDEVAGRINQIKAEIENTDSDWDREKLQERLAKLAGGV 376          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH601_CHRVO (60 kDa chaperonin 1 OS=Chromobacterium violaceum GN=groL1 PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.794e-54
Identity = 109/213 (51.17%), Postives = 148/213 (69.48%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            DA+DKVG +GV+                GM+ DRGY+SP F+T+PEK     E+  VL+ D+KIS I+D++P+LE+  +   PLLI+AEDV GEALATLVVN +RGIL VAA+KAPGFG+RRKA+L+DIAI+TG    A + GL +E   + +LG+A++V I K++TTII  A  K +I AR+  ++ ++    S YD EKL ER+AKLSGGV
Sbjct:  164 DAMDKVGKEGVITVEDGKSLDNELAVVEGMQFDRGYLSPYFITDPEKQTAVLEDPLVLLYDKKISNIRDLLPVLEQVAKAGKPLLIVAEDVEGEALATLVVNSMRGILKVAAVKAPGFGDRRKAMLEDIAILTGGTVIAEETGLTLEKAGLAELGSAKRVEIGKENTTIIDGAGDKAKIDARVQAIRAQIDAATSDYDREKLQERVAKLSGGV 376          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_STRZT (60 kDa chaperonin OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=groL PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.344e-54
Identity = 107/213 (50.23%), Postives = 147/213 (69.01%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A++KVG DGV+                GM+ DRGY+S   VT+ EK++ + EN  +L+TD+KIS I++I+PLLE   Q   PLLIIA+DV GEAL TLV+NK+RG  NV A+KAPGFG+RRKA+L+DIAI+TG      DLGL +++ ++E LG A +VT+ KDST I+  A + + I  R+A +K ++  T S +D EKL ER+AKLSGGV
Sbjct:  162 EAMEKVGKDGVITIEESRGMETELEVVEGMQFDRGYLSQYMVTDSEKMVADLENPYILITDKKISNIQEILPLLESILQSNRPLLIIADDVDGEALPTLVLNKIRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGTVITEDLGLELKDATIEALGQAARVTVDKDSTVIVEGAGNPEAISHRVAVIKSQIETTTSEFDREKLQERLAKLSGGV 374          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_STRZP (60 kDa chaperonin OS=Streptococcus pneumoniae (strain P1031) GN=groL PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.344e-54
Identity = 107/213 (50.23%), Postives = 147/213 (69.01%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A++KVG DGV+                GM+ DRGY+S   VT+ EK++ + EN  +L+TD+KIS I++I+PLLE   Q   PLLIIA+DV GEAL TLV+NK+RG  NV A+KAPGFG+RRKA+L+DIAI+TG      DLGL +++ ++E LG A +VT+ KDST I+  A + + I  R+A +K ++  T S +D EKL ER+AKLSGGV
Sbjct:  162 EAMEKVGKDGVITIEESRGMETELEVVEGMQFDRGYLSQYMVTDSEKMVADLENPYILITDKKISNIQEILPLLESILQSNRPLLIIADDVDGEALPTLVLNKIRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGTVITEDLGLELKDATIEALGQAARVTVDKDSTVIVEGAGNPEAISHRVAVIKSQIETTTSEFDREKLQERLAKLSGGV 374          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_STRZJ (60 kDa chaperonin OS=Streptococcus pneumoniae (strain JJA) GN=groL PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.344e-54
Identity = 107/213 (50.23%), Postives = 147/213 (69.01%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A++KVG DGV+                GM+ DRGY+S   VT+ EK++ + EN  +L+TD+KIS I++I+PLLE   Q   PLLIIA+DV GEAL TLV+NK+RG  NV A+KAPGFG+RRKA+L+DIAI+TG      DLGL +++ ++E LG A +VT+ KDST I+  A + + I  R+A +K ++  T S +D EKL ER+AKLSGGV
Sbjct:  162 EAMEKVGKDGVITIEESRGMETELEVVEGMQFDRGYLSQYMVTDSEKMVADLENPYILITDKKISNIQEILPLLESILQSNRPLLIIADDVDGEALPTLVLNKIRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGTVITEDLGLELKDATIEALGQAARVTVDKDSTVIVEGAGNPEAISHRVAVIKSQIETTTSEFDREKLQERLAKLSGGV 374          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_STRR6 (60 kDa chaperonin OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=groL PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.344e-54
Identity = 107/213 (50.23%), Postives = 147/213 (69.01%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A++KVG DGV+                GM+ DRGY+S   VT+ EK++ + EN  +L+TD+KIS I++I+PLLE   Q   PLLIIA+DV GEAL TLV+NK+RG  NV A+KAPGFG+RRKA+L+DIAI+TG      DLGL +++ ++E LG A +VT+ KDST I+  A + + I  R+A +K ++  T S +D EKL ER+AKLSGGV
Sbjct:  162 EAMEKVGKDGVITIEESRGMETELEVVEGMQFDRGYLSQYMVTDSEKMVADLENPYILITDKKISNIQEILPLLESILQSNRPLLIIADDVDGEALPTLVLNKIRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGTVITEDLGLELKDATIEALGQAARVTVDKDSTVIVEGAGNPEAISHRVAVIKSQIETTTSEFDREKLQERLAKLSGGV 374          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_STRPS (60 kDa chaperonin OS=Streptococcus pneumoniae (strain CGSP14) GN=groL PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.344e-54
Identity = 107/213 (50.23%), Postives = 147/213 (69.01%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A++KVG DGV+                GM+ DRGY+S   VT+ EK++ + EN  +L+TD+KIS I++I+PLLE   Q   PLLIIA+DV GEAL TLV+NK+RG  NV A+KAPGFG+RRKA+L+DIAI+TG      DLGL +++ ++E LG A +VT+ KDST I+  A + + I  R+A +K ++  T S +D EKL ER+AKLSGGV
Sbjct:  162 EAMEKVGKDGVITIEESRGMETELEVVEGMQFDRGYLSQYMVTDSEKMVADLENPYILITDKKISNIQEILPLLESILQSNRPLLIIADDVDGEALPTLVLNKIRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGTVITEDLGLELKDATIEALGQAARVTVDKDSTVIVEGAGNPEAISNRVAVIKSQIETTTSEFDREKLQERLAKLSGGV 374          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_STRPN (60 kDa chaperonin OS=Streptococcus pneumoniae GN=groL PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.344e-54
Identity = 107/213 (50.23%), Postives = 147/213 (69.01%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A++KVG DGV+                GM+ DRGY+S   VT+ EK++ + EN  +L+TD+KIS I++I+PLLE   Q   PLLIIA+DV GEAL TLV+NK+RG  NV A+KAPGFG+RRKA+L+DIAI+TG      DLGL +++ ++E LG A +VT+ KDST I+  A + + I  R+A +K ++  T S +D EKL ER+AKLSGGV
Sbjct:  162 EAMEKVGKDGVITIEESRGMETELEVVEGMQFDRGYLSQYMVTDSEKMVADLENPYILITDKKISNIQEILPLLESILQSNRPLLIIADDVDGEALPTLVLNKIRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGTVITEDLGLELKDATIEALGQAARVTVDKDSTVIVEGAGNPEAISHRVAVIKSQIETTTSEFDREKLQERLAKLSGGV 374          
The following BLAST results are available for this feature:
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH602_STRAW1.794e-5450.2360 kDa chaperonin 2 OS=Streptomyces avermitilis GN... [more]
CH602_CHRVO1.794e-5449.7760 kDa chaperonin 2 OS=Chromobacterium violaceum G... [more]
CH601_STRAW1.794e-5451.1660 kDa chaperonin 1 OS=Streptomyces avermitilis GN... [more]
CH601_CHRVO1.794e-5451.1760 kDa chaperonin 1 OS=Chromobacterium violaceum G... [more]
CH60_STRZT2.344e-5450.2360 kDa chaperonin OS=Streptococcus pneumoniae (str... [more]
CH60_STRZP2.344e-5450.2360 kDa chaperonin OS=Streptococcus pneumoniae (str... [more]
CH60_STRZJ2.344e-5450.2360 kDa chaperonin OS=Streptococcus pneumoniae (str... [more]
CH60_STRR62.344e-5450.2360 kDa chaperonin OS=Streptococcus pneumoniae (str... [more]
CH60_STRPS2.344e-5450.2360 kDa chaperonin OS=Streptococcus pneumoniae (str... [more]
CH60_STRPN2.344e-5450.2360 kDa chaperonin OS=Streptococcus pneumoniae GN=g... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00107 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00107 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623016 ID=BQ623016; Name=BQ623016; organism=Citrus sinensis; type=EST; length=641bp
CCGATGCAATTGACAAGGTTGGTCCTGATGGCGTCTTGTCAATCGAGTCA
TCATCATCATTTGAGACTACTGTTGAAGTTGAGGAAGGAATGGAGATTGA
CAGGGGTTACATCTCTCCTCAGTTTGTCACAAACCCTGAGAAATTAATTG
TTGAATTTGAGAATGCTAGAGTGCTGGTCACGGATCAAAAAATTTCAGCA
ATAAAGGATATAATTCCCTTGTTAGAGAAGACCACACAATTGAGAGCACC
ATTGCTTATAATTGCTGAGGATGTCACAGGAGAGGCTTTGGCTACGTTAG
TCGTCAACAAGCTCAGGGGCATCCTTAATGTTGCTGCCATTAAAGCTCCT
GGTTTTGGCGAAAGAAGAAAAGCTCTCCTTCAAGATATTGCCATTGTGAC
TGGAGCTGAGTTTCAAGCTGGAGACCTGGGCTTGCTTATTGAAAACACTT
CAGTTGAGCAGCTAGGTACAGCTAGAAAGGTGACCATCAGAAAGGACTCC
ACTACCATTATTGCTGATGCTGCATCAAAGGATGAAATACAAGCTAGAAT
TGCACAGCTGAAAAAGGAGTTGGCTGAGACGGATTCTGTTTATGACTCAG
AGAAACTTGCTGAGAGAATTGCTAAATTGTCTGGCGGGGTT
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