BQ623016

Overview
NameBQ623016
Unique NameBQ623016
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length641
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_STRPJ (60 kDa chaperonin OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=groL PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.344e-54
Identity = 107/213 (50.23%), Postives = 147/213 (69.01%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A++KVG DGV+                GM+ DRGY+S   VT+ EK++ + EN  +L+TD+KIS I++I+PLLE   Q   PLLIIA+DV GEAL TLV+NK+RG  NV A+KAPGFG+RRKA+L+DIAI+TG      DLGL +++ ++E LG A +VT+ KDST I+  A + + I  R+A +K ++  T S +D EKL ER+AKLSGGV
Sbjct:  162 EAMEKVGKDGVITIEESRGMETELEVVEGMQFDRGYLSQYMVTDSEKMVADLENPYILITDKKISNIQEILPLLESILQSNRPLLIIADDVDGEALPTLVLNKIRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGTVITEDLGLELKDATIEALGQAARVTVDKDSTVIVEGAGNPEAISHRVAVIKSQIETTTSEFDREKLQERLAKLSGGV 374          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_STRPI (60 kDa chaperonin OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=groL PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.344e-54
Identity = 107/213 (50.23%), Postives = 147/213 (69.01%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A++KVG DGV+                GM+ DRGY+S   VT+ EK++ + EN  +L+TD+KIS I++I+PLLE   Q   PLLIIA+DV GEAL TLV+NK+RG  NV A+KAPGFG+RRKA+L+DIAI+TG      DLGL +++ ++E LG A +VT+ KDST I+  A + + I  R+A +K ++  T S +D EKL ER+AKLSGGV
Sbjct:  162 EAMEKVGKDGVITIEESRGMETELEVVEGMQFDRGYLSQYMVTDSEKMVADLENPYILITDKKISNIQEILPLLESILQSNRPLLIIADDVDGEALPTLVLNKIRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGTVITEDLGLELKDATIEALGQAARVTVDKDSTVIVEGAGNPEAISNRVAVIKSQIETTTSEFDREKLQERLAKLSGGV 374          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_STRP7 (60 kDa chaperonin OS=Streptococcus pneumoniae (strain 70585) GN=groL PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.344e-54
Identity = 107/213 (50.23%), Postives = 147/213 (69.01%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A++KVG DGV+                GM+ DRGY+S   VT+ EK++ + EN  +L+TD+KIS I++I+PLLE   Q   PLLIIA+DV GEAL TLV+NK+RG  NV A+KAPGFG+RRKA+L+DIAI+TG      DLGL +++ ++E LG A +VT+ KDST I+  A + + I  R+A +K ++  T S +D EKL ER+AKLSGGV
Sbjct:  162 EAMEKVGKDGVITIEESRGMETELEVVEGMQFDRGYLSQYMVTDSEKMVADLENPYILITDKKISNIQEILPLLESILQSNRPLLIIADDVDGEALPTLVLNKIRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGTVITEDLGLELKDATIEALGQAARVTVDKDSTVIVEGAGNPEAISHRVAVIKSQIETTTSEFDREKLQERLAKLSGGV 374          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_STRP4 (60 kDa chaperonin OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=groL PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.344e-54
Identity = 107/213 (50.23%), Postives = 147/213 (69.01%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A++KVG DGV+                GM+ DRGY+S   VT+ EK++ + EN  +L+TD+KIS I++I+PLLE   Q   PLLIIA+DV GEAL TLV+NK+RG  NV A+KAPGFG+RRKA+L+DIAI+TG      DLGL +++ ++E LG A +VT+ KDST I+  A + + I  R+A +K ++  T S +D EKL ER+AKLSGGV
Sbjct:  162 EAMEKVGKDGVITIEESRGMETELEVVEGMQFDRGYLSQYMVTDSEKMVADLENPYILITDKKISNIQEILPLLESILQSNRPLLIIADDVDGEALPTLVLNKIRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGTVITEDLGLELKDATIEALGQAARVTVDKDSTVIVEGAGNPEAISHRVAVIKSQIETTTSEFDREKLQERLAKLSGGV 374          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_STRP2 (60 kDa chaperonin OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=groL PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.344e-54
Identity = 107/213 (50.23%), Postives = 147/213 (69.01%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A++KVG DGV+                GM+ DRGY+S   VT+ EK++ + EN  +L+TD+KIS I++I+PLLE   Q   PLLIIA+DV GEAL TLV+NK+RG  NV A+KAPGFG+RRKA+L+DIAI+TG      DLGL +++ ++E LG A +VT+ KDST I+  A + + I  R+A +K ++  T S +D EKL ER+AKLSGGV
Sbjct:  162 EAMEKVGKDGVITIEESRGMETELEVVEGMQFDRGYLSQYMVTDSEKMVADLENPYILITDKKISNIQEILPLLESILQSNRPLLIIADDVDGEALPTLVLNKIRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGTVITEDLGLELKDATIEALGQAARVTVDKDSTVIVEGAGNPEAISHRVAVIKSQIETTTSEFDREKLQERLAKLSGGV 374          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_SHEB8 (60 kDa chaperonin OS=Shewanella baltica (strain OS185) GN=groL PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.344e-54
Identity = 107/212 (50.47%), Postives = 151/212 (71.23%), Query Frame = 3
Query:    6 AIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            A++KVG +GV+                GM+ DRGY+SP F+  PE   VE ++  VL+ D+KIS I++++P+LE   +   PLLI+AEDV GEALATLVVN +RGI+ VAA+KAPGFG+RRKA+LQD+AI+TG    A ++GL +E  ++E LGTA++V I KD+TTII     + +I AR++Q+K+++ E+ S YD EKL ER+AKL+GGV
Sbjct:  165 AMEKVGKEGVITVEEGQALENELDVVEGMQFDRGYLSPYFINKPETGSVELDHPFVLLVDKKISNIRELLPILEGLAKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDVAILTGGTVIAEEIGLELEKATLEDLGTAKRVVITKDNTTIIDGNGEQTQIAARVSQIKQQVEESTSDYDKEKLQERMAKLAGGV 376          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_SHEB5 (60 kDa chaperonin OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=groL PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.344e-54
Identity = 107/212 (50.47%), Postives = 151/212 (71.23%), Query Frame = 3
Query:    6 AIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            A++KVG +GV+                GM+ DRGY+SP F+  PE   VE ++  VL+ D+KIS I++++P+LE   +   PLLI+AEDV GEALATLVVN +RGI+ VAA+KAPGFG+RRKA+LQD+AI+TG    A ++GL +E  ++E LGTA++V I KD+TTII     + +I AR++Q+K+++ E+ S YD EKL ER+AKL+GGV
Sbjct:  165 AMEKVGKEGVITVEEGQALENELDVVEGMQFDRGYLSPYFINKPETGSVELDHPFVLLVDKKISNIRELLPILEGLAKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDVAILTGGTVIAEEIGLELEKATLEDLGTAKRVVITKDNTTIIDGNGEQTQIAARVSQIKQQVEESTSDYDKEKLQERMAKLAGGV 376          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_PSEE4 (60 kDa chaperonin OS=Pseudomonas entomophila (strain L48) GN=groL PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.344e-54
Identity = 103/213 (48.36%), Postives = 151/213 (70.89%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A++KVG +GV+                GM+ DRGY+SP FV  P+ ++ E E   +L+ D+KIS I++++P+LE   +   PLLI+AEDV GEALATLVVN +RGI+ VAA+KAPGFG+RRKA+LQDIA +TG +  + ++GL +E  ++E LG A++V + K++TTII  A +  +I+AR+ Q++ ++ ET S YD EKL ER+AKL+GGV
Sbjct:  164 EAMEKVGKEGVITVEEGSGLENELSVVEGMQFDRGYLSPYFVNKPDTMVAELEGPLLLLVDKKISNIRELLPVLEAVAKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGQVISEEIGLSLETATLEHLGNAKRVILSKENTTIIDGAGADGDIEARVKQIRAQIEETSSDYDREKLQERLAKLAGGV 376          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_LACHE (60 kDa chaperonin OS=Lactobacillus helveticus GN=groL PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.344e-54
Identity = 105/213 (49.30%), Postives = 150/213 (70.42%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            DA++KVG DGV+                GM+ DRGY+S   VT+ +K+  + +N  +L+TD+KIS I+DI+PLL++  Q    LLIIA+D+TGEAL TLV+NK+RG  NV A+KAPGFG+RRKA LQDIA +TG      DLGL +++T ++QLG AR++T+ KDSTTI+  A SK+ I  R+  ++K++ ++ S +D +KL ER+AKL+GGV
Sbjct:  162 DAMEKVGHDGVITIEDSRGINTELSVVEGMQFDRGYLSQYMVTDNDKMEADLDNPYILITDKKISNIQDILPLLQEIVQQGKSLLIIADDITGEALPTLVLNKIRGTFNVVAVKAPGFGDRRKAQLQDIAALTGGTVITEDLGLELKDTKIDQLGQARRITVTKDSTTIVGGAGSKEAIDERVDTIRKQIEDSTSDFDKKKLQERLAKLTGGV 374          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_CLOTH (60 kDa chaperonin OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=groL PE=1 SV=3)

HSP 1 Score: 211.846 bits (538), Expect = 2.344e-54
Identity = 110/213 (51.64%), Postives = 148/213 (69.48%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            DA++KV  DGV+                GM+ DRGY+SP  VT+ EK+    +   +L+TD+KIS I+DI+PLLE+  Q    L+IIAEDV GEALATL+VNKLRG     A+KAPGFG+RRKA+L+DIAI+TG +    DLGL +++T+VEQLG AR+V ++K++T I+  A    EIQ RIA +K ++ ET S +D EKL ER+AKL+GGV
Sbjct:  162 DAMEKVTNDGVITVEEAKTMGTNLEIVEGMQFDRGYVSPYMVTDTEKMEAVLDEPYILITDKKISNIQDILPLLEQIVQQGKKLVIIAEDVEGEALATLLVNKLRGTFTCVAVKAPGFGDRRKAMLEDIAILTGGQVITSDLGLELKDTTVEQLGRARQVKVQKENTIIVDGAGDPKEIQKRIASIKSQIEETTSDFDREKLQERLAKLAGGV 374          
The following BLAST results are available for this feature:
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_STRPJ2.344e-5450.2360 kDa chaperonin OS=Streptococcus pneumoniae (str... [more]
CH60_STRPI2.344e-5450.2360 kDa chaperonin OS=Streptococcus pneumoniae (str... [more]
CH60_STRP72.344e-5450.2360 kDa chaperonin OS=Streptococcus pneumoniae (str... [more]
CH60_STRP42.344e-5450.2360 kDa chaperonin OS=Streptococcus pneumoniae sero... [more]
CH60_STRP22.344e-5450.2360 kDa chaperonin OS=Streptococcus pneumoniae sero... [more]
CH60_SHEB82.344e-5450.4760 kDa chaperonin OS=Shewanella baltica (strain OS... [more]
CH60_SHEB52.344e-5450.4760 kDa chaperonin OS=Shewanella baltica (strain OS... [more]
CH60_PSEE42.344e-5448.3660 kDa chaperonin OS=Pseudomonas entomophila (stra... [more]
CH60_LACHE2.344e-5449.3060 kDa chaperonin OS=Lactobacillus helveticus GN=g... [more]
CH60_CLOTH2.344e-5451.6460 kDa chaperonin OS=Clostridium thermocellum (str... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00107 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00107 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623016 ID=BQ623016; Name=BQ623016; organism=Citrus sinensis; type=EST; length=641bp
CCGATGCAATTGACAAGGTTGGTCCTGATGGCGTCTTGTCAATCGAGTCA
TCATCATCATTTGAGACTACTGTTGAAGTTGAGGAAGGAATGGAGATTGA
CAGGGGTTACATCTCTCCTCAGTTTGTCACAAACCCTGAGAAATTAATTG
TTGAATTTGAGAATGCTAGAGTGCTGGTCACGGATCAAAAAATTTCAGCA
ATAAAGGATATAATTCCCTTGTTAGAGAAGACCACACAATTGAGAGCACC
ATTGCTTATAATTGCTGAGGATGTCACAGGAGAGGCTTTGGCTACGTTAG
TCGTCAACAAGCTCAGGGGCATCCTTAATGTTGCTGCCATTAAAGCTCCT
GGTTTTGGCGAAAGAAGAAAAGCTCTCCTTCAAGATATTGCCATTGTGAC
TGGAGCTGAGTTTCAAGCTGGAGACCTGGGCTTGCTTATTGAAAACACTT
CAGTTGAGCAGCTAGGTACAGCTAGAAAGGTGACCATCAGAAAGGACTCC
ACTACCATTATTGCTGATGCTGCATCAAAGGATGAAATACAAGCTAGAAT
TGCACAGCTGAAAAAGGAGTTGGCTGAGACGGATTCTGTTTATGACTCAG
AGAAACTTGCTGAGAGAATTGCTAAATTGTCTGGCGGGGTT
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