BQ623016

Overview
NameBQ623016
Unique NameBQ623016
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length641
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_DELAS (60 kDa chaperonin OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=groL PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.061e-54
Identity = 108/213 (50.70%), Postives = 148/213 (69.48%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A+DKVG +GV+                GM+ DRGY+SP F+ NPEK +   +N  VL+ D+KIS I+D++P LE   +   PLLIIAEDV GEALATLVVN +RGIL V A+KAPGFG+RRKA+L+DIAI+TG +  A ++GL ++  ++E LG A ++ I K++TTII  A    EI+AR+ Q++ ++ E  S YD EKL ER+AKL+GGV
Sbjct:  164 EAMDKVGKEGVITVEEGKSLANELDVVEGMQFDRGYLSPYFINNPEKQVALLDNPFVLLFDKKISNIRDLLPTLEAVAKAGRPLLIIAEDVEGEALATLVVNTIRGILKVVAVKAPGFGDRRKAMLEDIAILTGGKVIAEEVGLALDKVTLEDLGQAVRIEIGKENTTIIDGAGQAAEIEARVKQIRIQIEEATSDYDREKLQERVAKLAGGV 376          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_COXBU (60 kDa chaperonin OS=Coxiella burnetii GN=groL PE=1 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.061e-54
Identity = 102/213 (47.89%), Postives = 150/213 (70.42%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A++KVG +GV+                GM+ DRGY+SP F+ N + +  E EN  +L+ D+KIS I+++IPLLE   +   PLL+IAED+ GEALATLVVN +RG++ VAA+KAPGFG+RRKA+LQDIA++TG +  + ++GL +E  S++ LG+A++V + KD TTII  +    +I+ R+ Q++KE+  + S YD EKL ER+AKL+GGV
Sbjct:  164 EAMEKVGKEGVITVEDGSGLENALEVVEGMQFDRGYLSPYFINNQQNMSAELENPFILLVDKKISNIRELIPLLENVAKSGRPLLVIAEDIEGEALATLVVNNIRGVVKVAAVKAPGFGDRRKAMLQDIAVLTGGKVISEEVGLSLEAASLDDLGSAKRVVVTKDDTTIIDGSGDAGDIKNRVEQIRKEIENSSSDYDKEKLQERLAKLAGGV 376          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_COXBN (60 kDa chaperonin OS=Coxiella burnetii (strain Dugway 5J108-111) GN=groL PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.061e-54
Identity = 102/213 (47.89%), Postives = 150/213 (70.42%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A++KVG +GV+                GM+ DRGY+SP F+ N + +  E EN  +L+ D+KIS I+++IPLLE   +   PLL+IAED+ GEALATLVVN +RG++ VAA+KAPGFG+RRKA+LQDIA++TG +  + ++GL +E  S++ LG+A++V + KD TTII  +    +I+ R+ Q++KE+  + S YD EKL ER+AKL+GGV
Sbjct:  164 EAMEKVGKEGVITVEDGSGLENALEVVEGMQFDRGYLSPYFINNQQNMSAELENPFILLVDKKISNIRELIPLLENVAKSGRPLLVIAEDIEGEALATLVVNNIRGVVKVAAVKAPGFGDRRKAMLQDIAVLTGGKVISEEVGLSLEAASLDDLGSAKRVVVTKDDTTIIDGSGDAGDIKNRVEQIRKEIENSSSDYDKEKLQERLAKLAGGV 376          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_COXB2 (60 kDa chaperonin OS=Coxiella burnetii (strain CbuG_Q212) GN=groL PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.061e-54
Identity = 102/213 (47.89%), Postives = 150/213 (70.42%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A++KVG +GV+                GM+ DRGY+SP F+ N + +  E EN  +L+ D+KIS I+++IPLLE   +   PLL+IAED+ GEALATLVVN +RG++ VAA+KAPGFG+RRKA+LQDIA++TG +  + ++GL +E  S++ LG+A++V + KD TTII  +    +I+ R+ Q++KE+  + S YD EKL ER+AKL+GGV
Sbjct:  164 EAMEKVGKEGVITVEDGSGLENALEVVEGMQFDRGYLSPYFINNQQNMSAELENPFILLVDKKISNIRELIPLLENVAKSGRPLLVIAEDIEGEALATLVVNNIRGVVKVAAVKAPGFGDRRKAMLQDIAVLTGGKVISEEVGLSLEAASLDDLGSAKRVVVTKDDTTIIDGSGDAGDIKNRVEQIRKEIENSSSDYDKEKLQERLAKLAGGV 376          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_COXB1 (60 kDa chaperonin OS=Coxiella burnetii (strain CbuK_Q154) GN=groL PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.061e-54
Identity = 102/213 (47.89%), Postives = 150/213 (70.42%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A++KVG +GV+                GM+ DRGY+SP F+ N + +  E EN  +L+ D+KIS I+++IPLLE   +   PLL+IAED+ GEALATLVVN +RG++ VAA+KAPGFG+RRKA+LQDIA++TG +  + ++GL +E  S++ LG+A++V + KD TTII  +    +I+ R+ Q++KE+  + S YD EKL ER+AKL+GGV
Sbjct:  164 EAMEKVGKEGVITVEDGSGLENALEVVEGMQFDRGYLSPYFINNQQNMSAELENPFILLVDKKISNIRELIPLLENVAKSGRPLLVIAEDIEGEALATLVVNNIRGVVKVAAVKAPGFGDRRKAMLQDIAVLTGGKVISEEVGLSLEAASLDDLGSAKRVVVTKDDTTIIDGSGDAGDIKNRVEQIRKEIENSSSDYDKEKLQERLAKLAGGV 376          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_BACAN (60 kDa chaperonin OS=Bacillus anthracis GN=groL PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.061e-54
Identity = 107/213 (50.23%), Postives = 149/213 (69.95%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A+++VG DGV+                GM+ DRGY SP  +T+ +K+    +N  +L+TD+KIS I++I+P+LE+  Q   PLLIIAEDV GEALATLVVNKLRG  NV A+KAPGFG+RRKA+L+DIAI+TG E    +LG  +++ +VE LG A KV + K++TT++    S ++I+ARI Q++ +L ET S +D EKL ER+AKL GGV
Sbjct:  162 EAMERVGNDGVITLEESKGFTTELDVVEGMQFDRGYASPYMITDSDKMEAVLDNPYILITDKKISNIQEILPVLEQVVQQGKPLLIIAEDVEGEALATLVVNKLRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGEVITEELGRDLKSATVESLGRAGKVVVTKENTTVVEGVGSTEQIEARIGQIRAQLEETTSEFDREKLQERLAKLVGGV 374          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_BACAC (60 kDa chaperonin OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=groL PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.061e-54
Identity = 107/213 (50.23%), Postives = 149/213 (69.95%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A+++VG DGV+                GM+ DRGY SP  +T+ +K+    +N  +L+TD+KIS I++I+P+LE+  Q   PLLIIAEDV GEALATLVVNKLRG  NV A+KAPGFG+RRKA+L+DIAI+TG E    +LG  +++ +VE LG A KV + K++TT++    S ++I+ARI Q++ +L ET S +D EKL ER+AKL GGV
Sbjct:  162 EAMERVGNDGVITLEESKGFTTELDVVEGMQFDRGYASPYMITDSDKMEAVLDNPYILITDKKISNIQEILPVLEQVVQQGKPLLIIAEDVEGEALATLVVNKLRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGEVITEELGRDLKSATVESLGRAGKVVVTKENTTVVEGVGSTEQIEARIGQIRAQLEETTSEFDREKLQERLAKLVGGV 374          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_BACAA (60 kDa chaperonin OS=Bacillus anthracis (strain A0248) GN=groL PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.061e-54
Identity = 107/213 (50.23%), Postives = 149/213 (69.95%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A+++VG DGV+                GM+ DRGY SP  +T+ +K+    +N  +L+TD+KIS I++I+P+LE+  Q   PLLIIAEDV GEALATLVVNKLRG  NV A+KAPGFG+RRKA+L+DIAI+TG E    +LG  +++ +VE LG A KV + K++TT++    S ++I+ARI Q++ +L ET S +D EKL ER+AKL GGV
Sbjct:  162 EAMERVGNDGVITLEESKGFTTELDVVEGMQFDRGYASPYMITDSDKMEAVLDNPYILITDKKISNIQEILPVLEQVVQQGKPLLIIAEDVEGEALATLVVNKLRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGEVITEELGRDLKSATVESLGRAGKVVVTKENTTVVEGVGSTEQIEARIGQIRAQLEETTSEFDREKLQERLAKLVGGV 374          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH604_SINMW (60 kDa chaperonin 4 OS=Sinorhizobium medicae (strain WSM419) GN=groL4 PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.061e-54
Identity = 106/212 (50.00%), Postives = 150/212 (70.75%), Query Frame = 3
Query:    6 AIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            A++KVG +GV+                GM+ DRGY+SP FVTN EK+ VE ++  +L+ ++K+  ++ ++P+LE   Q   PLLII+EDV GEAL TLVVNKLRG L +AA+K+PGFG+RRKA+LQDIA++T  +  + D+G+ +EN +++ LG AR+V I KD+TTII  +  K  IQA I+Q+K ++ ET S YD EKL ER+AKL+GGV
Sbjct:  165 AMEKVGNEGVITVEEARTADTELDVVEGMQFDRGYLSPYFVTNAEKMRVELDDPYILIHEKKLGNLQTMLPILEAVVQSGKPLLIISEDVEGEALTTLVVNKLRGGLKIAAVKSPGFGDRRKAMLQDIAVLTAGQMISEDIGIKLENVTLDMLGRARRVLIEKDTTTIIDGSGDKASIQACISQIKAQIEETTSDYDKEKLQERLAKLTGGV 376          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH604_FRAAA (60 kDa chaperonin 4 OS=Frankia alni (strain ACN14a) GN=groL4 PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.061e-54
Identity = 103/213 (48.36%), Postives = 149/213 (69.95%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A+DKVG +GV+                GM  D+GYISP FVT+ ++     ++  +L+ + KI+A+KD++PLLEK  Q   PL+II+EDV GEALATLVVNK+RG     A+KAPGFG+RRKA+L DIAI+TG +  + D+GL +E+TS++ LG ARK+ + KD TT++  +   D+I  R++Q++ E+ ++DS YD EKL ER+AKL+GGV
Sbjct:  162 EALDKVGKEGVVTVEESNTFGLELELTEGMRFDKGYISPYFVTDADRQEAVLDDPYILIVNSKIAAVKDLLPLLEKVMQTSKPLVIISEDVEGEALATLVVNKIRGTFKSVAVKAPGFGDRRKAILGDIAILTGGQVISEDVGLKLESTSLDLLGRARKIVVTKDETTVVEGSGDPDQIAGRVSQIRNEIDKSDSDYDREKLQERLAKLAGGV 374          
The following BLAST results are available for this feature:
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_DELAS3.061e-5450.7060 kDa chaperonin OS=Delftia acidovorans (strain D... [more]
CH60_COXBU3.061e-5447.8960 kDa chaperonin OS=Coxiella burnetii GN=groL PE=... [more]
CH60_COXBN3.061e-5447.8960 kDa chaperonin OS=Coxiella burnetii (strain Dug... [more]
CH60_COXB23.061e-5447.8960 kDa chaperonin OS=Coxiella burnetii (strain Cbu... [more]
CH60_COXB13.061e-5447.8960 kDa chaperonin OS=Coxiella burnetii (strain Cbu... [more]
CH60_BACAN3.061e-5450.2360 kDa chaperonin OS=Bacillus anthracis GN=groL PE... [more]
CH60_BACAC3.061e-5450.2360 kDa chaperonin OS=Bacillus anthracis (strain CD... [more]
CH60_BACAA3.061e-5450.2360 kDa chaperonin OS=Bacillus anthracis (strain A0... [more]
CH604_SINMW3.061e-5450.0060 kDa chaperonin 4 OS=Sinorhizobium medicae (stra... [more]
CH604_FRAAA3.061e-5448.3660 kDa chaperonin 4 OS=Frankia alni (strain ACN14a... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00107 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00107 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623016 ID=BQ623016; Name=BQ623016; organism=Citrus sinensis; type=EST; length=641bp
CCGATGCAATTGACAAGGTTGGTCCTGATGGCGTCTTGTCAATCGAGTCA
TCATCATCATTTGAGACTACTGTTGAAGTTGAGGAAGGAATGGAGATTGA
CAGGGGTTACATCTCTCCTCAGTTTGTCACAAACCCTGAGAAATTAATTG
TTGAATTTGAGAATGCTAGAGTGCTGGTCACGGATCAAAAAATTTCAGCA
ATAAAGGATATAATTCCCTTGTTAGAGAAGACCACACAATTGAGAGCACC
ATTGCTTATAATTGCTGAGGATGTCACAGGAGAGGCTTTGGCTACGTTAG
TCGTCAACAAGCTCAGGGGCATCCTTAATGTTGCTGCCATTAAAGCTCCT
GGTTTTGGCGAAAGAAGAAAAGCTCTCCTTCAAGATATTGCCATTGTGAC
TGGAGCTGAGTTTCAAGCTGGAGACCTGGGCTTGCTTATTGAAAACACTT
CAGTTGAGCAGCTAGGTACAGCTAGAAAGGTGACCATCAGAAAGGACTCC
ACTACCATTATTGCTGATGCTGCATCAAAGGATGAAATACAAGCTAGAAT
TGCACAGCTGAAAAAGGAGTTGGCTGAGACGGATTCTGTTTATGACTCAG
AGAAACTTGCTGAGAGAATTGCTAAATTGTCTGGCGGGGTT
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