BQ623016

Overview
NameBQ623016
Unique NameBQ623016
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length641
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_BURMS (60 kDa chaperonin OS=Burkholderia mallei (strain SAVP1) GN=groL PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 3.998e-54
Identity = 104/213 (48.83%), Postives = 148/213 (69.48%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A+DKVG +GV+                GM+ DRGY+SP F+ NP+K +   EN  VL+ D+K+S I+D++P+LE+  +   PLLIIAEDV GEALATLVVN +RGIL   A+KAPGFG+RRKA+L+DIAI+TG +  A + GL +E  ++ +LG A+++ + K++TTII  A     I+AR+ Q++ ++ E  S YD EKL ER+AKL+GGV
Sbjct:  164 EAMDKVGKEGVITVEDGKSLADELDVVEGMQFDRGYLSPYFINNPDKQVAVLENPFVLLHDKKVSNIRDLLPVLEQVAKAGRPLLIIAEDVEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLEDIAILTGGQVIAEETGLTLEKATLAELGQAKRIEVGKENTTIIDGAGEAVNIEARVKQIRTQIEEATSDYDREKLQERVAKLAGGV 376          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_BURMA (60 kDa chaperonin OS=Burkholderia mallei GN=groL PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 3.998e-54
Identity = 104/213 (48.83%), Postives = 148/213 (69.48%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A+DKVG +GV+                GM+ DRGY+SP F+ NP+K +   EN  VL+ D+K+S I+D++P+LE+  +   PLLIIAEDV GEALATLVVN +RGIL   A+KAPGFG+RRKA+L+DIAI+TG +  A + GL +E  ++ +LG A+++ + K++TTII  A     I+AR+ Q++ ++ E  S YD EKL ER+AKL+GGV
Sbjct:  164 EAMDKVGKEGVITVEDGKSLADELDVVEGMQFDRGYLSPYFINNPDKQVAVLENPFVLLHDKKVSNIRDLLPVLEQVAKAGRPLLIIAEDVEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLEDIAILTGGQVIAEETGLTLEKATLAELGQAKRIEVGKENTTIIDGAGEAVNIEARVKQIRTQIEEATSDYDREKLQERVAKLAGGV 376          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_BURM9 (60 kDa chaperonin OS=Burkholderia mallei (strain NCTC 10229) GN=groL PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 3.998e-54
Identity = 104/213 (48.83%), Postives = 148/213 (69.48%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A+DKVG +GV+                GM+ DRGY+SP F+ NP+K +   EN  VL+ D+K+S I+D++P+LE+  +   PLLIIAEDV GEALATLVVN +RGIL   A+KAPGFG+RRKA+L+DIAI+TG +  A + GL +E  ++ +LG A+++ + K++TTII  A     I+AR+ Q++ ++ E  S YD EKL ER+AKL+GGV
Sbjct:  164 EAMDKVGKEGVITVEDGKSLADELDVVEGMQFDRGYLSPYFINNPDKQVAVLENPFVLLHDKKVSNIRDLLPVLEQVAKAGRPLLIIAEDVEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLEDIAILTGGQVIAEETGLTLEKATLAELGQAKRIEVGKENTTIIDGAGEAVNIEARVKQIRTQIEEATSDYDREKLQERVAKLAGGV 376          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_BURM7 (60 kDa chaperonin OS=Burkholderia mallei (strain NCTC 10247) GN=groL PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 3.998e-54
Identity = 104/213 (48.83%), Postives = 148/213 (69.48%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A+DKVG +GV+                GM+ DRGY+SP F+ NP+K +   EN  VL+ D+K+S I+D++P+LE+  +   PLLIIAEDV GEALATLVVN +RGIL   A+KAPGFG+RRKA+L+DIAI+TG +  A + GL +E  ++ +LG A+++ + K++TTII  A     I+AR+ Q++ ++ E  S YD EKL ER+AKL+GGV
Sbjct:  164 EAMDKVGKEGVITVEDGKSLADELDVVEGMQFDRGYLSPYFINNPDKQVAVLENPFVLLHDKKVSNIRDLLPVLEQVAKAGRPLLIIAEDVEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLEDIAILTGGQVIAEETGLTLEKATLAELGQAKRIEVGKENTTIIDGAGEAVNIEARVKQIRTQIEEATSDYDREKLQERVAKLAGGV 376          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_BORRA (60 kDa chaperonin OS=Borrelia recurrentis (strain A1) GN=groL PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 3.998e-54
Identity = 106/213 (49.77%), Postives = 148/213 (69.48%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A+D+VG DGV+                GM+ DRGY+SP F TN E + V F++  +L+ ++KIS IK+++P+LEK      PLLIIAED+ G+ALA LV+N +RG L V AIKAPGFG+RRKA+L+DIAI+TG    + +LGL +EN  +EQLG A+ V + KD+TTII +  ++++I+ R   +KK++ ET S YD EKL ER+AKL GGV
Sbjct:  163 EAMDRVGKDGVITVEESKTFDTTISYVEGMQFDRGYLSPYFSTNKENMSVSFDDTYILICEKKISTIKELLPVLEKVVNTNKPLLIIAEDIEGDALAALVLNSVRGALKVCAIKAPGFGDRRKAMLEDIAILTGGVLVSEELGLTLENVELEQLGQAKSVKVDKDNTTII-NTGNREQIRERAELIKKQIEETSSEYDKEKLQERLAKLVGGV 374          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_BORDL (60 kDa chaperonin OS=Borrelia duttonii (strain Ly) GN=groL PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 3.998e-54
Identity = 106/213 (49.77%), Postives = 148/213 (69.48%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A+D+VG DGV+                GM+ DRGY+SP F TN E + V F++  +L+ ++KIS IK+++P+LEK      PLLIIAED+ G+ALA LV+N +RG L V AIKAPGFG+RRKA+L+DIAI+TG    + +LGL +EN  +EQLG A+ V + KD+TTII +  ++++I+ R   +KK++ ET S YD EKL ER+AKL GGV
Sbjct:  163 EAMDRVGKDGVITVEESKTFDTTISYVEGMQFDRGYLSPYFSTNKENMSVSFDDTYILICEKKISTIKELLPVLEKVVNTNKPLLIIAEDIEGDALAALVLNSVRGALKVCAIKAPGFGDRRKAMLEDIAILTGGVLVSEELGLTLENVELEQLGQAKSVKVDKDNTTII-NTGNREQIRERAELIKKQIEETSSEYDKEKLQERLAKLVGGV 374          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_ALTMD (60 kDa chaperonin OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=groL PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 3.998e-54
Identity = 106/212 (50.00%), Postives = 147/212 (69.34%), Query Frame = 3
Query:    6 AIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            A++KVG +GV+                GM+ DRGY+SP F+ N E   VE +N  +L+ D+KIS I++++P LE   +   PL+IIAEDV GEALATLVVN +RGI+ VAA+KAPGFG+RRKA+LQDIAI+TG    + ++GL +E   +E LGTA++V I KD+TT++     ++ I+ R AQ+K ++ E+ S YD EKL ER+AKLSGGV
Sbjct:  165 AMEKVGKEGVITVEEGQALQNELDVVEGMQFDRGYLSPYFINNQENGTVELDNPFILLVDKKISNIRELLPTLEGVAKAGKPLMIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTVISEEIGLELEKVQLEDLGTAKRVVINKDNTTVVDGNGDQEAIEGRCAQIKGQIEESSSDYDKEKLQERLAKLSGGV 376          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_ALKMQ (60 kDa chaperonin OS=Alkaliphilus metalliredigens (strain QYMF) GN=groL PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 3.998e-54
Identity = 108/213 (50.70%), Postives = 150/213 (70.42%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            DA+DKVG DGV+                GM+ DRGY+SP  VT+ EK+   F +A +LVTD+KIS I++I+P+LE+  Q    L+IIAED+ GEALATLVVNKLRG     A+KAPGFG+RRK++L DIA++TGA   + +LG  ++  +V+ LGTAR V + K++TTI+  A ++  I+ R++Q+KK++ ET S +D EKL ER+AKLSGGV
Sbjct:  162 DAMDKVGKDGVITVEESKSMGTTLDVVEGMQFDRGYLSPYMVTDTEKMEAVFNDAYILVTDKKISNIQEILPILEQIVQQGKKLVIIAEDIEGEALATLVVNKLRGTFECVAVKAPGFGDRRKSMLDDIAVLTGATVISEELGYDLKTATVDMLGTARTVKVDKENTTIVEGAGNQQLIKDRVSQIKKQIEETTSDFDKEKLQERLAKLSGGV 374          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH601_BURTA (60 kDa chaperonin 1 OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=groL1 PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 3.998e-54
Identity = 104/213 (48.83%), Postives = 148/213 (69.48%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A+DKVG +GV+                GM+ DRGY+SP F+ NP+K +   EN  VL+ D+K+S I+D++P+LE+  +   PLLIIAEDV GEALATLVVN +RGIL   A+KAPGFG+RRKA+L+DIAI+TG +  A + GL +E  ++ +LG A+++ + K++TTII  A     I+AR+ Q++ ++ E  S YD EKL ER+AKL+GGV
Sbjct:  164 EAMDKVGKEGVITVEDGKSLADELDVVEGMQFDRGYLSPYFINNPDKQVAVLENPFVLLHDKKVSNIRDLLPVLEQVAKAGRPLLIIAEDVEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLEDIAILTGGQVIAEETGLTLEKATLAELGQAKRIEVGKENTTIIDGAGEAVNIEARVKQIRTQIEEATSDYDREKLQERVAKLAGGV 376          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH601_BURPS (60 kDa chaperonin 1 OS=Burkholderia pseudomallei GN=groL1 PE=3 SV=2)

HSP 1 Score: 211.075 bits (536), Expect = 3.998e-54
Identity = 104/213 (48.83%), Postives = 148/213 (69.48%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A+DKVG +GV+                GM+ DRGY+SP F+ NP+K +   EN  VL+ D+K+S I+D++P+LE+  +   PLLIIAEDV GEALATLVVN +RGIL   A+KAPGFG+RRKA+L+DIAI+TG +  A + GL +E  ++ +LG A+++ + K++TTII  A     I+AR+ Q++ ++ E  S YD EKL ER+AKL+GGV
Sbjct:  164 EAMDKVGKEGVITVEDGKSLADELDVVEGMQFDRGYLSPYFINNPDKQVAVLENPFVLLHDKKVSNIRDLLPVLEQVAKAGRPLLIIAEDVEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLEDIAILTGGQVIAEETGLTLEKATLAELGQAKRIEVGKENTTIIDGAGEAVNIEARVKQIRTQIEEATSDYDREKLQERVAKLAGGV 376          
The following BLAST results are available for this feature:
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_BURMS3.998e-5448.8360 kDa chaperonin OS=Burkholderia mallei (strain S... [more]
CH60_BURMA3.998e-5448.8360 kDa chaperonin OS=Burkholderia mallei GN=groL P... [more]
CH60_BURM93.998e-5448.8360 kDa chaperonin OS=Burkholderia mallei (strain N... [more]
CH60_BURM73.998e-5448.8360 kDa chaperonin OS=Burkholderia mallei (strain N... [more]
CH60_BORRA3.998e-5449.7760 kDa chaperonin OS=Borrelia recurrentis (strain ... [more]
CH60_BORDL3.998e-5449.7760 kDa chaperonin OS=Borrelia duttonii (strain Ly)... [more]
CH60_ALTMD3.998e-5450.0060 kDa chaperonin OS=Alteromonas macleodii (strain... [more]
CH60_ALKMQ3.998e-5450.7060 kDa chaperonin OS=Alkaliphilus metalliredigens ... [more]
CH601_BURTA3.998e-5448.8360 kDa chaperonin 1 OS=Burkholderia thailandensis ... [more]
CH601_BURPS3.998e-5448.8360 kDa chaperonin 1 OS=Burkholderia pseudomallei G... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00107 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00107 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623016 ID=BQ623016; Name=BQ623016; organism=Citrus sinensis; type=EST; length=641bp
CCGATGCAATTGACAAGGTTGGTCCTGATGGCGTCTTGTCAATCGAGTCA
TCATCATCATTTGAGACTACTGTTGAAGTTGAGGAAGGAATGGAGATTGA
CAGGGGTTACATCTCTCCTCAGTTTGTCACAAACCCTGAGAAATTAATTG
TTGAATTTGAGAATGCTAGAGTGCTGGTCACGGATCAAAAAATTTCAGCA
ATAAAGGATATAATTCCCTTGTTAGAGAAGACCACACAATTGAGAGCACC
ATTGCTTATAATTGCTGAGGATGTCACAGGAGAGGCTTTGGCTACGTTAG
TCGTCAACAAGCTCAGGGGCATCCTTAATGTTGCTGCCATTAAAGCTCCT
GGTTTTGGCGAAAGAAGAAAAGCTCTCCTTCAAGATATTGCCATTGTGAC
TGGAGCTGAGTTTCAAGCTGGAGACCTGGGCTTGCTTATTGAAAACACTT
CAGTTGAGCAGCTAGGTACAGCTAGAAAGGTGACCATCAGAAAGGACTCC
ACTACCATTATTGCTGATGCTGCATCAAAGGATGAAATACAAGCTAGAAT
TGCACAGCTGAAAAAGGAGTTGGCTGAGACGGATTCTGTTTATGACTCAG
AGAAACTTGCTGAGAGAATTGCTAAATTGTCTGGCGGGGTT
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