BQ623016

Overview
NameBQ623016
Unique NameBQ623016
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length641
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH601_BURP6 (60 kDa chaperonin 1 OS=Burkholderia pseudomallei (strain 668) GN=groL1 PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 3.998e-54
Identity = 104/213 (48.83%), Postives = 148/213 (69.48%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A+DKVG +GV+                GM+ DRGY+SP F+ NP+K +   EN  VL+ D+K+S I+D++P+LE+  +   PLLIIAEDV GEALATLVVN +RGIL   A+KAPGFG+RRKA+L+DIAI+TG +  A + GL +E  ++ +LG A+++ + K++TTII  A     I+AR+ Q++ ++ E  S YD EKL ER+AKL+GGV
Sbjct:  164 EAMDKVGKEGVITVEDGKSLADELDVVEGMQFDRGYLSPYFINNPDKQVAVLENPFVLLHDKKVSNIRDLLPVLEQVAKAGRPLLIIAEDVEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLEDIAILTGGQVIAEETGLTLEKATLAELGQAKRIEVGKENTTIIDGAGEAVNIEARVKQIRTQIEEATSDYDREKLQERVAKLAGGV 376          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH601_BURP1 (60 kDa chaperonin 1 OS=Burkholderia pseudomallei (strain 1710b) GN=groL1 PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 3.998e-54
Identity = 104/213 (48.83%), Postives = 148/213 (69.48%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A+DKVG +GV+                GM+ DRGY+SP F+ NP+K +   EN  VL+ D+K+S I+D++P+LE+  +   PLLIIAEDV GEALATLVVN +RGIL   A+KAPGFG+RRKA+L+DIAI+TG +  A + GL +E  ++ +LG A+++ + K++TTII  A     I+AR+ Q++ ++ E  S YD EKL ER+AKL+GGV
Sbjct:  164 EAMDKVGKEGVITVEDGKSLADELDVVEGMQFDRGYLSPYFINNPDKQVAVLENPFVLLHDKKVSNIRDLLPVLEQVAKAGRPLLIIAEDVEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLEDIAILTGGQVIAEETGLTLEKATLAELGQAKRIEVGKENTTIIDGAGEAVNIEARVKQIRTQIEEATSDYDREKLQERVAKLAGGV 376          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH601_BURP0 (60 kDa chaperonin 1 OS=Burkholderia pseudomallei (strain 1106a) GN=groL1 PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 3.998e-54
Identity = 104/213 (48.83%), Postives = 148/213 (69.48%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A+DKVG +GV+                GM+ DRGY+SP F+ NP+K +   EN  VL+ D+K+S I+D++P+LE+  +   PLLIIAEDV GEALATLVVN +RGIL   A+KAPGFG+RRKA+L+DIAI+TG +  A + GL +E  ++ +LG A+++ + K++TTII  A     I+AR+ Q++ ++ E  S YD EKL ER+AKL+GGV
Sbjct:  164 EAMDKVGKEGVITVEDGKSLADELDVVEGMQFDRGYLSPYFINNPDKQVAVLENPFVLLHDKKVSNIRDLLPVLEQVAKAGRPLLIIAEDVEGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLEDIAILTGGQVIAEETGLTLEKATLAELGQAKRIEVGKENTTIIDGAGEAVNIEARVKQIRTQIEEATSDYDREKLQERVAKLAGGV 376          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH601_ANASL (60 kDa chaperonin 1 OS=Anabaena sp. (strain L31) GN=groL1 PE=1 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 3.998e-54
Identity = 104/213 (48.83%), Postives = 152/213 (71.36%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A+DKVG + V+                GM  D+GYISP F T+PE++   F+   + V D++I+ ++D++P+LE   +   PL+IIAED+  EALATLVVN+LRG+LNVAA+KAPGFG+RRKA+L+DIAI+TG +    D GL ++NT ++ LG AR++TI KDSTTI+A+  +   ++AR+ Q+++++ ET+S YD  KL ER+AKLSGGV
Sbjct:  163 EALDKVGKEAVISLEEGKSVTTELEVTEGMRFDKGYISPYFATDPERMEAIFDEPFLAVDDKQIALVQDLVPVLEPVARAGRPLVIIAEDIEKEALATLVVNRLRGVLNVAAVKAPGFGDRRKAMLEDIAILTGGQLITEDAGLKLDNTKLDSLGKARRITITKDSTTIVAE-GNDVAVKARVEQIRRQMEETESSYDKGKLQERLAKLSGGV 374          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_THEM4 (60 kDa chaperonin OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=groL PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 5.221e-54
Identity = 106/213 (49.77%), Postives = 148/213 (69.48%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A++KVG DGV+                GM+ DRGYISP FVT+PEK+ V +    +L+TD+K+S IK +IP+LEK  Q   PL+IIAEDV GEAL TLV+NKL+G LN  A+KAPGFG+RRKA+LQDIAI+TG    + ++G+ +E+ ++  LG A  V ++KD T I+     ++EI+ RIAQ+K ++ +T S Y+ E L ER+AKL+GGV
Sbjct:  162 EAMEKVGEDGVITVEDSKSIDTFVEFTEGMQFDRGYISPYFVTDPEKMEVVYNEPFILITDRKLSNIKPLIPILEKVAQTGKPLVIIAEDVEGEALTTLVLNKLKGTLNTVAVKAPGFGDRRKAMLQDIAILTGGIVASEEVGINLEDLTLNDLGRADVVRVKKDETIIVGGHGDQEEIKKRIAQIKAQIEQTTSEYEKETLQERMAKLAGGV 374          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_TETHA (60 kDa chaperonin OS=Tetragenococcus halophilus GN=groL PE=3 SV=2)

HSP 1 Score: 210.69 bits (535), Expect = 5.221e-54
Identity = 107/213 (50.23%), Postives = 148/213 (69.48%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            DA+DKVG DGV+                GM+ DRGY+S   VT+ EK+  + ++  +L+TD+KIS I+DI+PLLE+  Q   PLLIIA+D+ GEAL TLV+NK+RG  NV A KAPGFG+RRKA+L+DIA++TGA     DLGL +++ +++ LG A KVT+ KD+TTI+  A     I+ R+  +K ++AET S +D EKL ER+AKL+GGV
Sbjct:  162 DAMDKVGNDGVITIEDSQGIDTELDVVEGMQFDRGYLSQYMVTDNEKMEADLDSPYILITDKKISNIQDILPLLEQVVQESKPLLIIADDIDGEALPTLVLNKIRGTFNVVATKAPGFGDRRKAMLEDIAVLTGATVITEDLGLELKDATMDSLGKANKVTVDKDNTTIVEGAGDSTAIEDRVQLIKNQVAETTSDFDREKLQERLAKLAGGV 374          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_STAEP (60 kDa chaperonin OS=Staphylococcus epidermidis GN=groL PE=3 SV=2)

HSP 1 Score: 210.69 bits (535), Expect = 5.221e-54
Identity = 102/213 (47.89%), Postives = 147/213 (69.01%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A+DKVG DGV+                GM+ DRGY SP  VT+ +K+I E E   +LVTD+KIS+ +DI+PLLE+  Q   P+LI+A++V G+AL  +V+N++RG     A+KAPGFG+RRKA+L+D+AI+TGA+    DLGL +++ S++ LGTA KV + KD TT++     ++ I AR+ Q+K ++ ETDS  D EKL ER+AKL+GGV
Sbjct:  162 EAMDKVGNDGVITIEESNGFNTELEVAEGMQFDRGYQSPYMVTDSDKMIAELERPYILVTDKKISSFQDILPLLEQVVQASRPILIVADEVEGDALTNIVLNRMRGTFTAVAVKAPGFGDRRKAMLEDLAILTGAQVITDDLGLELKDASLDMLGTANKVEVTKDHTTVVDGNGDENNIDARVGQIKAQIEETDSECDKEKLQERVAKLAGGV 374          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_STACT (60 kDa chaperonin OS=Staphylococcus carnosus (strain TM300) GN=groL PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 5.221e-54
Identity = 104/213 (48.83%), Postives = 148/213 (69.48%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A+DKVG DGV+                GM+ DRGY SP  VT+ EK+  + E   +LVTD+KIS+ +DI+PLLE+  Q   P+LIIA++V G+AL  +V+N++RG     A+KAPGFG+RRK++L+DIAI+TGA+F   DLG  +++ +V+ LGTA KV + KD+TTI+     K+ I AR+ QLK ++ ET+S +D EKL ER+AKL+GGV
Sbjct:  162 EAMDKVGNDGVISIEESNGFNTELEVVEGMQFDRGYQSPYMVTDSEKMEADLERPYILVTDKKISSFQDILPLLEQIVQSNRPILIIADEVEGDALTNIVLNRMRGTFTAVAVKAPGFGDRRKSMLEDIAILTGAQFITDDLGYDLKDATVDMLGTANKVEVTKDNTTIVNGDGDKNSIDARVTQLKSQIEETNSDFDREKLQERLAKLTGGV 374          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_PHOLL (60 kDa chaperonin OS=Photorhabdus luminescens subsp. laumondii GN=groL PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 5.221e-54
Identity = 103/213 (48.36%), Postives = 148/213 (69.48%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A+DKVG +GV+                GM+ DRGY+SP F+  PE   VE EN  +L+ D+KIS I++++P+LE   +   PLLI+AEDV GEALATLVVN +RGI+ VAA+KAPGFG+RRKA+L DIA++T     + ++GL +E  ++E LG A+++ I KD+TTII     +D I+ R++Q+ +++ E+ S YD EKL ER+AKL+GGV
Sbjct:  164 EAMDKVGKEGVITVEEGTGLEDELDVVEGMQFDRGYLSPYFINKPENGSVELENPYILLVDKKISNIRELLPVLEGVAKASKPLLIVAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLHDIAVLTNGNVISEEIGLELEKATLEDLGQAKRIVINKDTTTIIDGVGEEDAIKGRVSQINQQIKESTSDYDREKLQERVAKLAGGV 376          
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Match: CH60_PELCD (60 kDa chaperonin OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=groL PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 5.221e-54
Identity = 105/213 (49.30%), Postives = 153/213 (71.83%), Query Frame = 3
Query:    3 DAIDKVGPDGVLXXXXXXXXXXXXXXXXGMEIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRAPLLIIAEDVTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAGDLGLLIENTSVEQLGTARKVTIRKDSTTIIADAASKDEIQARIAQLKKELAETDSVYDSEKLAERIAKLSGGV 641
            +A++KVG +GV+                GM+ DRGY+SP FVT+ E++    E+A +L+ D+KIS ++D+I +LE   +   PLLIIAED+ GEALATLVVN+LRG LNVAA+KAPGFG+RRKA+L+DIAI+TG +  + ++G  +EN +++ LG A+++ I K+++TII  A S+ +IQ R+ Q++ ++ ET S YD EKL ER+AKL GGV
Sbjct:  164 EAMEKVGKEGVITVEEAKAMETSLETVEGMQFDRGYLSPYFVTDAERMEAVMEDAMILIHDKKISNMRDMINILEAVAKQGRPLLIIAEDIEGEALATLVVNRLRGTLNVAAVKAPGFGDRRKAMLEDIAILTGGKVISEEVGFKLENATIDMLGNAKRIVIDKENSTIIDGAGSEVDIQGRVKQIRAQIEETKSDYDREKLQERLAKLVGGV 376          
The following BLAST results are available for this feature:
BLAST of BQ623016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH601_BURP63.998e-5448.8360 kDa chaperonin 1 OS=Burkholderia pseudomallei (... [more]
CH601_BURP13.998e-5448.8360 kDa chaperonin 1 OS=Burkholderia pseudomallei (... [more]
CH601_BURP03.998e-5448.8360 kDa chaperonin 1 OS=Burkholderia pseudomallei (... [more]
CH601_ANASL3.998e-5448.8360 kDa chaperonin 1 OS=Anabaena sp. (strain L31) G... [more]
CH60_THEM45.221e-5449.7760 kDa chaperonin OS=Thermosipho melanesiensis (st... [more]
CH60_TETHA5.221e-5450.2360 kDa chaperonin OS=Tetragenococcus halophilus GN... [more]
CH60_STAEP5.221e-5447.8960 kDa chaperonin OS=Staphylococcus epidermidis GN... [more]
CH60_STACT5.221e-5448.8360 kDa chaperonin OS=Staphylococcus carnosus (stra... [more]
CH60_PHOLL5.221e-5448.3660 kDa chaperonin OS=Photorhabdus luminescens subs... [more]
CH60_PELCD5.221e-5449.3060 kDa chaperonin OS=Pelobacter carbinolicus (stra... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00107 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00107 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623016 ID=BQ623016; Name=BQ623016; organism=Citrus sinensis; type=EST; length=641bp
CCGATGCAATTGACAAGGTTGGTCCTGATGGCGTCTTGTCAATCGAGTCA
TCATCATCATTTGAGACTACTGTTGAAGTTGAGGAAGGAATGGAGATTGA
CAGGGGTTACATCTCTCCTCAGTTTGTCACAAACCCTGAGAAATTAATTG
TTGAATTTGAGAATGCTAGAGTGCTGGTCACGGATCAAAAAATTTCAGCA
ATAAAGGATATAATTCCCTTGTTAGAGAAGACCACACAATTGAGAGCACC
ATTGCTTATAATTGCTGAGGATGTCACAGGAGAGGCTTTGGCTACGTTAG
TCGTCAACAAGCTCAGGGGCATCCTTAATGTTGCTGCCATTAAAGCTCCT
GGTTTTGGCGAAAGAAGAAAAGCTCTCCTTCAAGATATTGCCATTGTGAC
TGGAGCTGAGTTTCAAGCTGGAGACCTGGGCTTGCTTATTGAAAACACTT
CAGTTGAGCAGCTAGGTACAGCTAGAAAGGTGACCATCAGAAAGGACTCC
ACTACCATTATTGCTGATGCTGCATCAAAGGATGAAATACAAGCTAGAAT
TGCACAGCTGAAAAAGGAGTTGGCTGAGACGGATTCTGTTTATGACTCAG
AGAAACTTGCTGAGAGAATTGCTAAATTGTCTGGCGGGGTT
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