BQ623019

Overview
NameBQ623019
Unique NameBQ623019
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length650
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_LAWIP (60 kDa chaperonin OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=groL PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 7.537e-40
Identity = 91/174 (52.30%), Postives = 119/174 (68.39%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            ET S YD EKL ER+AKL GGVAVI VGAATETE++++K R+EDA NAT AA+EEGIVPGGG A V     +  IK    D DE  G +I++++L  P   IA NA            +++   G+NA + +YE++++AGVIDP KVTR ALQNAASVA ++LTT+  + EKP+
Sbjct:  355 ETSSDYDREKLQERLAKLVGGVAVIHVGAATETEMKEKKDRVEDALNATRAAVEEGIVPGGGTAFVRSIKVLDDIKP--ADDDELAGLNIIRRSLEEPLRQIAANAGYEGSIVVEKVREAKDGFGFNAASGEYEDLIKAGVIDPKKVTRIALQNAASVASLLLTTECAIAEKPE 526          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_BURTH (60 kDa chaperonin OS=Burkholderia thailandensis GN=groL PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 7.537e-40
Identity = 90/174 (51.72%), Postives = 114/174 (65.52%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            E  S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEGIVPGGG AL+     + A+     +AD+  G  IV +A+  P   I  N               +   GYNA T +Y +M++AGV+DP KVTR ALQNAASVAG++LTT A V E PK
Sbjct:  355 EATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALIRARTAIAALTG--VNADQNAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGKGNYGYNAATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAELPK 526          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_BACTN (60 kDa chaperonin OS=Bacteroides thetaiotaomicron GN=groL PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 7.537e-40
Identity = 90/186 (48.39%), Postives = 118/186 (63.44%), Query Frame = 1
Query:   25 NTS*NCTA*KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEK 582
            N    C   K     T S YD EKL ER+AKLSGGVAV+ VGAA+E E++++K R++DA  AT AAIEEGI+PGGG A +   D +  +K   ++ADE  G  I+++A+  P   I  NA            + +   GYNA TD YEN+  AGV+DPAKV R AL+NAAS+AGM LTT+ ++VEK
Sbjct:  341 NIKERCDQIKAQIVATKSDYDREKLQERLAKLSGGVAVLYVGAASEVEMKEKKDRVDDALRATRAAIEEGIIPGGGVAYIRAIDSLEGMKG--DNADETTGIGIIKRAIEEPLREIVANAGKEGAVVVQKVREGKGDFGYNARTDVYENLHAAGVVDPAKVARVALENAASIAGMFLTTECVIVEK 524          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH602_SPHAL (60 kDa chaperonin 2 OS=Sphingopyxis alaskensis GN=groL2 PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 7.537e-40
Identity = 90/178 (50.56%), Postives = 126/178 (70.79%), Query Frame = 1
Query:   70 TDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXD-SEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNS 600
            T S YD EKL ER+AKL+GGVAVI+VG ATE E+++RK R++DA +AT AA+EEGI+PGGG AL+     +  +  K  + D++ G DIV++AL APA  IA NA            + S++  G+NA T +YE++++AGVIDPAKV R ALQ+AASVA +++TT+A+V E PK + +
Sbjct:  356 TTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDALHATRAAVEEGILPGGGIALLRALKALDGL--KAANDDQQSGIDIVRRALRAPARQIADNAGEDGAWIVGKLLESSDYNWGFNAATGEYEDLVKAGVIDPAKVVRTALQDAASVAALLITTEALVAELPKEEKA 531          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH602_RHOSR (60 kDa chaperonin 2 OS=Rhodococcus sp. (strain RHA1) GN=groL2 PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 7.537e-40
Identity = 95/183 (51.91%), Postives = 119/183 (65.03%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE-DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQN 597
            +R    TDS +D EKL ER+AKL+GGVAVIKVGAATET+L++RK R+EDA NA  AA+ EGIVPGGG+ALV  S     + D L    DE  G  +V++AL AP   IA NA            +     G+NA T  Y ++L  GV+DP KVTR A+ NAASVA M+LTT++ VVEKP  +N
Sbjct:  348 RREIENTDSDWDREKLEERLAKLAGGVAVIKVGAATETDLKERKFRVEDAVNAAKAAVAEGIVPGGGSALVQASTE---LADNLGLTGDEATGVKVVREALQAPLYWIASNAGLDGSVVTSKVAEQPKGHGFNAATLTYGDLLADGVVDPVKVTRSAVVNAASVARMILTTESAVVEKPAEEN 527          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH602_RHIEC (60 kDa chaperonin 2 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=groL2 PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 7.537e-40
Identity = 88/177 (49.72%), Postives = 126/177 (71.19%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXD-SEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQ 594
            ET S YD EKL ER+AKL+GGVAVI+VG +TE E++++K R++DA +AT AA+EEGI+PGGG AL+     + +I  K  + D+R+G DIV++A+ AP   IA NA            + S+++ G+NA T +Y ++   GVIDPAKV R ALQ+AASVAG+++TT+A++ EKPK +
Sbjct:  355 ETTSDYDREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRVDDALHATRAAVEEGILPGGGVALLRAVKALDSI--KTANDDQRVGVDIVRRAIEAPVRQIAENAGAEGSIIVGKLREKSDFSYGWNAQTGEYGDLYAQGVIDPAKVVRTALQDAASVAGLLVTTEAMIAEKPKKE 529          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH602_ANADE (60 kDa chaperonin 2 OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=groL2 PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 7.537e-40
Identity = 91/179 (50.84%), Postives = 124/179 (69.27%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDS-EWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNS 600
            ET S YD EKL ER+AKL GGVAVI VGAATETE++++K R+EDA +AT AA+EEGIVPGGG A +     V A++    +  E++G DIV++A+  P   I+ N             ++ E   G+NA T +YE++++AGVIDP KV+R ALQNAASVA ++LTT A+V EKPK +++
Sbjct:  355 ETTSDYDREKLQERLAKLVGGVAVINVGAATETEMKEKKARVEDALHATRAAVEEGIVPGGGVAYLRC---VKALEGVKVNEGEKVGLDIVRRAIEEPLRQISGNGGYEGSIVVNKVKEAKEAAFGFNAATGEYEDLVKAGVIDPTKVSRSALQNAASVASLMLTTMAMVAEKPKEESA 530          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH601_THEFY (60 kDa chaperonin 1 OS=Thermobifida fusca (strain YX) GN=groL1 PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 7.537e-40
Identity = 96/182 (52.75%), Postives = 121/182 (66.48%), Query Frame = 1
Query:   70 TDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE-DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK---AQNSG 603
            TDS YD EKL ER+A+L+GGVAVIK GAATE EL++RK RIEDA     AA+EEGI+PGGG AL+  S    A  +KLE + DE +GA IV++A+  P   IA NA              E   G NA T +Y ++ + GVIDP KVTR ALQNAAS+AG+ LTT+A++ EKP+   A N+G
Sbjct:  355 TDSDYDREKLQERLARLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGILPGGGVALLQAS---IAAFEKLELEGDEAIGASIVRRAVEEPLKQIAINAGYEGGVVVEKVKSLEPGIGLNAATGEYTDLFKDGVIDPTKVTRSALQNAASIAGLFLTTEAVIAEKPEKPAANNAG 533          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH601_NITWN (60 kDa chaperonin 1 OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=groL1 PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 7.537e-40
Identity = 88/180 (48.89%), Postives = 124/180 (68.89%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXD-SEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            K    ET S YD EKL ER+AKL+GGVAVI+VG ATE E+++RK R++DA +AT AA+EEGI+PGGG AL+     + A+K   ++ D++ G DIV++A+  PA  I  NA            + + +  G+NA T +Y++++  GVIDPAKV R ALQ+AASVA +++TT+A+V EKPK
Sbjct:  350 KAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAMHATRAAVEEGILPGGGVALLRALKALDAVKP--DNPDQKAGVDIVRRAIQVPARQIIQNAGEDGSLVVGKLLEKNTYNWGFNAATGEYQDLVGVGVIDPAKVVRTALQDAASVASLLITTEALVAEKPK 527          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH601_MYXXD (60 kDa chaperonin 1 OS=Myxococcus xanthus (strain DK 1622) GN=groL1 PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 7.537e-40
Identity = 92/187 (49.20%), Postives = 122/187 (65.24%), Query Frame = 1
Query:   76 SVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKP--KAQNSGSRSDTRSYG 630
            S YD EKL ER+AKL GGVAVI VGAATETE++++K R+EDA +AT AA+EEGIVPGGG A +     +PA++      ++  G  I+++AL  P   IA NA            +     GYNA T+ YE++ +AGVIDP KV R ALQNAASVA ++LTT+A+V E+P  KA+  G+ +    YG
Sbjct:  358 SDYDREKLQERLAKLVGGVAVINVGAATETEMKEKKARVEDALHATRAAVEEGIVPGGGVAYLRA---LPALEKLKPGGEQDFGVAIIRRALQEPLRKIASNAGVEGAVVINKVREGTGAFGYNARTEVYEDLEKAGVIDPTKVERTALQNAASVASLLLTTEAMVAERPKGKAKGGGAGAGMPDYG 541          
The following BLAST results are available for this feature:
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_LAWIP7.537e-4052.3060 kDa chaperonin OS=Lawsonia intracellularis (str... [more]
CH60_BURTH7.537e-4051.7260 kDa chaperonin OS=Burkholderia thailandensis GN... [more]
CH60_BACTN7.537e-4048.3960 kDa chaperonin OS=Bacteroides thetaiotaomicron ... [more]
CH602_SPHAL7.537e-4050.5660 kDa chaperonin 2 OS=Sphingopyxis alaskensis GN=... [more]
CH602_RHOSR7.537e-4051.9160 kDa chaperonin 2 OS=Rhodococcus sp. (strain RHA... [more]
CH602_RHIEC7.537e-4049.7260 kDa chaperonin 2 OS=Rhizobium etli (strain CFN ... [more]
CH602_ANADE7.537e-4050.8460 kDa chaperonin 2 OS=Anaeromyxobacter dehalogena... [more]
CH601_THEFY7.537e-4052.7560 kDa chaperonin 1 OS=Thermobifida fusca (strain ... [more]
CH601_NITWN7.537e-4048.8960 kDa chaperonin 1 OS=Nitrobacter winogradskyi (s... [more]
CH601_MYXXD7.537e-4049.2060 kDa chaperonin 1 OS=Myxococcus xanthus (strain ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00110 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00110 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623019 ID=BQ623019; Name=BQ623019; organism=Citrus sinensis; type=EST; length=650bp
TGCTGATGCTGCATCAAAGGATGAAATACAAGCTAGAATTGCACAGCCTG
AAAAAGGAGTTGGCGTGAGACGGATTCTGTTTATGACTCAGAGAAACTTG
CTGAGAGAATTGCTAAATTGTCTGGCGGGGTTGCTGTTATTAAAGTTGGA
GCTGCCACAGAAACTGAGCTTGAGGACCGTAAACTCCGTATTGAAGATGC
CAAGAATGCAACTTTTGCAGCCATAGAGGAAGGTATTGTTCCTGGTGGTG
GTGCTGCTCTGGTTCATCTGTCTGATCATGTTCCTGCTATCAAGGACAAG
CTTGAAGATGCAGATGAGCGATTAGGTGCTGACATTGTGCAGAAGGCACT
GGTAGCACCTGCATCACTGATAGCTCACAATGCTGGAGTTGAAGGTGAGG
TTGTTGTGGAGAAGGTGAAAGATAGTGAATGGACGACTGGTTACAATGCA
ATGACAGACAAGTATGAGAACATGCTTCAGGCTGGAGTTATTGATCCTGC
CAAGGTGACAAGATGTGCATTGCAGAATGCGGCTTCAGTTGCAGGAATGG
TCCTGACCACTCAGGCTATTGTCGTGGAGAAGCCCAAAGCCCAAAACTCC
GGTAGCCGCTCCGACACAAGGTCTTATGGGGTAATCTCTAGGACTCTTCC
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