BQ623019

Overview
NameBQ623019
Unique NameBQ623019
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length650
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH601_MYCSS (60 kDa chaperonin 1 OS=Mycobacterium sp. (strain MCS) GN=groL1 PE=3 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 7.537e-40
Identity = 94/187 (50.27%), Postives = 120/187 (64.17%), Query Frame = 1
Query:   70 TDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNSGSRSDTRSYG 630
            +DS YD EKL ER+AKL+GGVAVIK GAATE EL++RK RIEDA     AA+EEGIV GGG AL+  +   P++++     DE  GA+IV+ AL AP   IA N             +S   TG NA T +YE++L AGV DP KVTR ALQNAAS+A + LTT+A+V +KP+   + +   T   G
Sbjct:  354 SDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQAA---PSLEELNLTGDEATGANIVRVALEAPLKQIAFNGGLEPGVVAEKVRNSAAGTGLNAATGEYEDLLAAGVADPVKVTRSALQNAASIAALFLTTEAVVADKPEKSAAPAGDPTGGMG 537          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH601_MYCSK (60 kDa chaperonin 1 OS=Mycobacterium sp. (strain KMS) GN=groL1 PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 7.537e-40
Identity = 94/187 (50.27%), Postives = 120/187 (64.17%), Query Frame = 1
Query:   70 TDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNSGSRSDTRSYG 630
            +DS YD EKL ER+AKL+GGVAVIK GAATE EL++RK RIEDA     AA+EEGIV GGG AL+  +   P++++     DE  GA+IV+ AL AP   IA N             +S   TG NA T +YE++L AGV DP KVTR ALQNAAS+A + LTT+A+V +KP+   + +   T   G
Sbjct:  354 SDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQAA---PSLEELNLTGDEATGANIVRVALEAPLKQIAFNGGLEPGVVAEKVRNSAAGTGLNAATGEYEDLLAAGVADPVKVTRSALQNAASIAALFLTTEAVVADKPEKSAAPAGDPTGGMG 537          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH601_MYCSJ (60 kDa chaperonin 1 OS=Mycobacterium sp. (strain JLS) GN=groL1 PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 7.537e-40
Identity = 94/187 (50.27%), Postives = 120/187 (64.17%), Query Frame = 1
Query:   70 TDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNSGSRSDTRSYG 630
            +DS YD EKL ER+AKL+GGVAVIK GAATE EL++RK RIEDA     AA+EEGIV GGG AL+  +   P++++     DE  GA+IV+ AL AP   IA N             +S   TG NA T +YE++L AGV DP KVTR ALQNAAS+A + LTT+A+V +KP+   + +   T   G
Sbjct:  354 SDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQAA---PSLEELNLTGDEATGANIVRVALEAPLKQIAFNGGLEPGVVAEKVRNSAAGTGLNAATGEYEDLLAAGVADPVKVTRSALQNAASIAALFLTTEAVVADKPEKSAAPAGDPTGGMG 537          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH601_BURTA (60 kDa chaperonin 1 OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=groL1 PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 7.537e-40
Identity = 90/174 (51.72%), Postives = 114/174 (65.52%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            E  S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEGIVPGGG AL+     + A+     +AD+  G  IV +A+  P   I  N               +   GYNA T +Y +M++AGV+DP KVTR ALQNAASVAG++LTT A V E PK
Sbjct:  355 EATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALIRARTAIAALTG--VNADQNAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGKGNYGYNAATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAELPK 526          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_CLOB8 (60 kDa chaperonin OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=groL PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 9.843e-40
Identity = 92/178 (51.69%), Postives = 119/178 (66.85%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKP 585
            K    ET S +D EKL ER+AKL+GGVAVIKVGAATETEL+++KLRIEDA  AT AA+EEGIV GGG A V++ + V  +   +  AD ++G +I+ K+L  P   IA NA            +SE   GY+A+  +Y NM++ G++DP KVTR ALQNAASVA   LTT+A V + P
Sbjct:  348 KAQIEETSSEFDKEKLQERLAKLAGGVAVIKVGAATETELKEKKLRIEDALAATKAAVEEGIVAGGGTAYVNVINEVAKLTSDV--ADTQIGINIIVKSLEEPVRQIATNAGVEGSVIIEKVKNSEPGIGYDALHGEYINMIKGGIVDPTKVTRSALQNAASVASTFLTTEAAVADIP 523          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH603_RHOBA (60 kDa chaperonin 3 OS=Rhodopirellula baltica GN=groL3 PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 9.843e-40
Identity = 94/193 (48.70%), Postives = 129/193 (66.84%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKP-KAQNSGSRSDTRSY 627
            +R    + S YD EKL ER+AKL+GGVA + VGAATE+E++++K R+EDA +AT AA+EEGI+PGGG AL+  S  V A  D L D D+ +G +IV +A  AP ++I+ NA              +   GYNA+TD YE+++++GVIDP KVTR AL NAASVA ++LT+ A+V EKP K+  +G   D   Y
Sbjct:  349 RREIELSTSDYDREKLEERLAKLAGGVAKVNVGAATESEMKEKKARVEDALHATRAAVEEGILPGGGVALLRASGKVKA-ADTLTD-DQLVGYNIVLRACRAPLTMISENAGQDGGIVCEKVLAMKGNEGYNALTDVYEDLVKSGVIDPTKVTRTALGNAASVATLLLTSDALVAEKPEKSGKAGHGGDHDMY 539          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH602_CHRVO (60 kDa chaperonin 2 OS=Chromobacterium violaceum GN=groL2 PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 9.843e-40
Identity = 88/193 (45.60%), Postives = 124/193 (64.25%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNSGSRSDTRSYG 630
            ++   E  S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEG+VPGGG AL+     +  +  K ++A++  G  IV +A+ AP   I  NA            + +   GYNA + +Y +ML+ GV+DPAKVTR ALQ+AASVAG++LTT  ++ E P+ + +    D    G
Sbjct:  350 RKQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALLRARATLENL--KTDNAEQEAGVKIVLRAIEAPLRQIVKNAGDEPSVVVNKVLEGKGNFGYNAASGEYGDMLEMGVLDPAKVTRSALQHAASVAGLMLTTDCMIAELPEDKPAAGMPDMGGMG 540          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH602_BURVG (60 kDa chaperonin 2 OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=groL2 PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 9.843e-40
Identity = 89/178 (50.00%), Postives = 118/178 (66.29%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNS 600
            E  S YD EKL ER+AKL+GGVAVIKVGA TE E++++K R++DA +AT AA+EEGIVPGGG AL+     +  +K    + D+  G  IV +AL AP  +IA NA            +     GYNA T +Y ++++AGV+DP KVTR ALQNAAS+AG+VLTT A V + PK + +
Sbjct:  355 EATSDYDREKLQERVAKLAGGVAVIKVGAVTEVEMKEKKDRVDDALHATRAAVEEGIVPGGGVALLRARAALTDLKG--ANGDQDAGIRIVLRALEAPLRVIASNAGDEPSVVIAKVLEGSGNFGYNAATGEYGDLVEAGVVDPTKVTRTALQNAASIAGLVLTTDATVADAPKDERA 530          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH601_GLUDA (60 kDa chaperonin 1 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=groL1 PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 9.843e-40
Identity = 87/175 (49.71%), Postives = 124/175 (70.86%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDS-EWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            ET S YD EKL ER+AKL+GGVAVI+VG +TE E+++RK R++DA +AT AA+EEGIVPGGG AL   S  +  +     + D+R+GA+I++KAL AP   IAHNA            +S ++  G++A    Y++++ AG+IDP KV R ALQ+A+SVAG+++TT+A+V EKP+
Sbjct:  355 ETTSDYDREKLQERLAKLAGGVAVIRVGGSTEVEVKERKDRVDDALHATRAAVEEGIVPGGGTALARASTALGNL--HFHNDDQRVGAEIIRKALQAPLRQIAHNAGEDGAVIAGKVLESNDYNYGFDAQIGDYKDLVAAGIIDPTKVVRTALQDASSVAGLLITTEAMVAEKPE 527          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH601_FRAAA (60 kDa chaperonin 1 OS=Frankia alni (strain ACN14a) GN=groL1 PE=3 SV=2)

HSP 1 Score: 163.31 bits (412), Expect = 9.843e-40
Identity = 95/188 (50.53%), Postives = 125/188 (66.49%), Query Frame = 1
Query:   70 TDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKL-EDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNSGSRSDTRSYG 630
            +DS +D EKL ER+AKL+GGVAVI+VGAATE EL+++K R+EDA +AT AAIEEGIV GGGAAL H++     + D L    DE  G  IV+ AL AP + IA NA            D     GYNA T +Y +++ AGVIDP KVTR A+ NAAS+A +++TT+++VVEKP A + G    +  +G
Sbjct:  354 SDSDWDREKLQERLAKLAGGVAVIRVGAATEVELKEKKHRLEDAVSATRAAIEEGIVAGGGAALAHVTS---VLDDGLGRTGDELAGVRIVRTALDAPLNWIARNAGLEGAVIVARVKDLAPGHGYNAATGEYTDLIAAGVIDPVKVTRSAVANAASIAALLITTESLVVEKP-AVSDGDHGHSHGHG 537          
The following BLAST results are available for this feature:
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH601_MYCSS7.537e-4050.2760 kDa chaperonin 1 OS=Mycobacterium sp. (strain M... [more]
CH601_MYCSK7.537e-4050.2760 kDa chaperonin 1 OS=Mycobacterium sp. (strain K... [more]
CH601_MYCSJ7.537e-4050.2760 kDa chaperonin 1 OS=Mycobacterium sp. (strain J... [more]
CH601_BURTA7.537e-4051.7260 kDa chaperonin 1 OS=Burkholderia thailandensis ... [more]
CH60_CLOB89.843e-4051.6960 kDa chaperonin OS=Clostridium beijerinckii (str... [more]
CH603_RHOBA9.843e-4048.7060 kDa chaperonin 3 OS=Rhodopirellula baltica GN=g... [more]
CH602_CHRVO9.843e-4045.6060 kDa chaperonin 2 OS=Chromobacterium violaceum G... [more]
CH602_BURVG9.843e-4050.0060 kDa chaperonin 2 OS=Burkholderia vietnamiensis ... [more]
CH601_GLUDA9.843e-4049.7160 kDa chaperonin 1 OS=Gluconacetobacter diazotrop... [more]
CH601_FRAAA9.843e-4050.5360 kDa chaperonin 1 OS=Frankia alni (strain ACN14a... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00110 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00110 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623019 ID=BQ623019; Name=BQ623019; organism=Citrus sinensis; type=EST; length=650bp
TGCTGATGCTGCATCAAAGGATGAAATACAAGCTAGAATTGCACAGCCTG
AAAAAGGAGTTGGCGTGAGACGGATTCTGTTTATGACTCAGAGAAACTTG
CTGAGAGAATTGCTAAATTGTCTGGCGGGGTTGCTGTTATTAAAGTTGGA
GCTGCCACAGAAACTGAGCTTGAGGACCGTAAACTCCGTATTGAAGATGC
CAAGAATGCAACTTTTGCAGCCATAGAGGAAGGTATTGTTCCTGGTGGTG
GTGCTGCTCTGGTTCATCTGTCTGATCATGTTCCTGCTATCAAGGACAAG
CTTGAAGATGCAGATGAGCGATTAGGTGCTGACATTGTGCAGAAGGCACT
GGTAGCACCTGCATCACTGATAGCTCACAATGCTGGAGTTGAAGGTGAGG
TTGTTGTGGAGAAGGTGAAAGATAGTGAATGGACGACTGGTTACAATGCA
ATGACAGACAAGTATGAGAACATGCTTCAGGCTGGAGTTATTGATCCTGC
CAAGGTGACAAGATGTGCATTGCAGAATGCGGCTTCAGTTGCAGGAATGG
TCCTGACCACTCAGGCTATTGTCGTGGAGAAGCCCAAAGCCCAAAACTCC
GGTAGCCGCTCCGACACAAGGTCTTATGGGGTAATCTCTAGGACTCTTCC
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