BQ623019

Overview
NameBQ623019
Unique NameBQ623019
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length650
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH601_RHISN (60 kDa chaperonin 1 OS=Rhizobium sp. (strain NGR234) GN=groL1 PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 1.274e-39
Identity = 87/175 (49.71%), Postives = 125/175 (71.43%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXD-SEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            ET S YD EKL ER+AKL+GGVAVI+VG +TE E+++RK R++DA +AT AA+EEG++PGGG AL+     + +I  + E+AD++ G +IV++AL AP   IA NA            + +E+  G+NA T+++ ++   GVIDP KV R ALQ+AASVAG+++TT+A+V EKPK
Sbjct:  355 ETTSDYDREKLQERLAKLAGGVAVIRVGGSTEVEVKERKDRVDDAMHATRAAVEEGVLPGGGVALLRAVKALDSI--RTENADQKHGIEIVRRALEAPVRQIAENAGAEGSIIVGKLREKTEFGFGWNAQTNEFGDLYDQGVIDPVKVVRTALQDAASVAGLLITTEAMVAEKPK 527          

HSP 2 Score: 21.557 bits (44), Expect = 1.274e-39
Identity = 9/13 (69.23%), Postives = 10/13 (76.92%), Query Frame = 2
Query:    8 AASKDEIQARIAQ 46
            A SK EIQ R+AQ
Sbjct:  336 AGSKSEIQGRVAQ 348          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_THISH (60 kDa chaperonin OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=groL PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.286e-39
Identity = 85/178 (47.75%), Postives = 118/178 (66.29%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNS 600
            +  S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEG+VPGGG ALV     + ++K    D D  +G  I ++A+  P   I  N             + +   GYNA T +Y +M++ G++DP KVTR ALQNAASV+G+++TT+A+V E PK  +S
Sbjct:  355 DATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRALQALKSLKGANHDQD--IGIAIARRAMEEPLRQIVSNCGEEPSVVLNNVVEGKGNYGYNAATGEYGDMIEMGILDPTKVTRSALQNAASVSGLIITTEAMVAELPKKGDS 530          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_SCAIO (60 kDa chaperonin OS=Scardovia inopinata GN=groL PE=3 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 1.286e-39
Identity = 93/174 (53.45%), Postives = 115/174 (66.09%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            ++DS YD EKL ER+AKL+GGVAVIKVGAATE E ++RK RIEDA     AAIEEG++PGGG ALV  +  V   K+   + DE  GA IV +A+ AP   IA NA                 +G NA T +YE++L AGV DP KVTR ALQNAAS+AG+ LTT+A+V  KP+
Sbjct:  353 DSDSDYDREKLQERLAKLAGGVAVIKVGAATEVEAKERKHRIEDAVRNAKAAIEEGLLPGGGVALVQAAADVQ--KNVKLEGDEATGAGIVFRAIEAPLKQIAQNAGFSGEVVIDKVRTLPAGSGLNAATGEYEDLLSAGVTDPVKVTRSALQNAASIAGLFLTTEAVVANKPE 524          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_METSS (60 kDa chaperonin OS=Methylovorus sp. (strain SS1 / DSM 11726) GN=groL PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.286e-39
Identity = 88/178 (49.44%), Postives = 117/178 (65.73%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNS 600
            E+ S YD EKL ER+AKLSGGVAVIKVGAATE E++++K R++DA +AT AA+EEGIVPGGG AL+     +  +K   ++ D+  G  IV +A+ AP   IA NA                  GYNA T +Y ++++ GV+DP KVTR ALQNAASVA ++LTT A + E PK + +
Sbjct:  355 ESTSDYDREKLQERVAKLSGGVAVIKVGAATEVEMKEKKDRVDDALHATRAAVEEGIVPGGGVALLRARSRIVNLKG--DNGDQDAGIRIVLRAIEAPLRAIAANAGDEPSVVINKVLAGSGNFGYNAATGEYADLVETGVVDPTKVTRTALQNAASVASLILTTDASIAELPKEEKA 530          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_BUCCM (60 kDa chaperonin OS=Buchnera aphidicola subsp. Chaetophorus leucomelas GN=groL PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.286e-39
Identity = 85/189 (44.97%), Postives = 123/189 (65.08%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNSGSRSDTRSYGV 633
            E+ S YD EKL ER+AKLSGGVAV+KVGAATE E++++K R+EDA +AT AA+EEG+V GGG ALV +++ +  +K + E  D+ +G  +  +++ AP   I  N+            D     GYNA TD+Y +M++ G++DP KVTR ALQ AASVAG+++TT+ +V + PK   S       + G+
Sbjct:  355 ESTSDYDKEKLNERLAKLSGGVAVLKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALVRVAEKISRLKGQNE--DQNVGIRVAVRSMEAPLRQIVANSGEEPSVVTNNVKDGVGNYGYNAATDQYGDMIKFGILDPTKVTRSALQYAASVAGLMITTECMVTDSPKEDKSSDMPSPSAGGM 541          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH603_BURCH (60 kDa chaperonin 3 OS=Burkholderia cenocepacia (strain HI2424) GN=groL3 PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.286e-39
Identity = 90/180 (50.00%), Postives = 120/180 (66.67%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNSGS 606
            E  S YD EKL ER+AKL+GGVAVIKVGA TE E++++K R++DA +AT AA+EEGIVPGGG AL+     +  I+    +AD+  G  IV +AL AP  +IA NA            + +   GYNA T +Y +++ AGV+DP KVTR ALQNAAS+A +VLTT A V + PK +++ S
Sbjct:  355 EATSDYDREKLQERVAKLAGGVAVIKVGAVTEVEMKEKKDRVDDALHATRAAVEEGIVPGGGVALLRARAALSDIRG--ANADQDAGIRIVLRALEAPLRVIAANAGDEPSVVISKVLEGKGNFGYNAATGEYGDLVDAGVVDPTKVTRTALQNAASIASLVLTTDATVAQAPKEESAES 532          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH602_BURCA (60 kDa chaperonin 2 OS=Burkholderia cenocepacia (strain AU 1054) GN=groL2 PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.286e-39
Identity = 90/180 (50.00%), Postives = 120/180 (66.67%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNSGS 606
            E  S YD EKL ER+AKL+GGVAVIKVGA TE E++++K R++DA +AT AA+EEGIVPGGG AL+     +  I+    +AD+  G  IV +AL AP  +IA NA            + +   GYNA T +Y +++ AGV+DP KVTR ALQNAAS+A +VLTT A V + PK +++ S
Sbjct:  355 EATSDYDREKLQERVAKLAGGVAVIKVGAVTEVEMKEKKDRVDDALHATRAAVEEGIVPGGGVALLRARAALSDIRG--ANADQDAGIRIVLRALEAPLRVIAANAGDEPSVVISKVLEGKGNFGYNAATGEYGDLVDAGVVDPTKVTRTALQNAASIASLVLTTDATVAQAPKEESAES 532          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH601_RHOPS (60 kDa chaperonin 1 OS=Rhodopseudomonas palustris (strain BisB5) GN=groL1 PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.286e-39
Identity = 88/180 (48.89%), Postives = 125/180 (69.44%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXD-SEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            K    ET S YD EKL ER+AKL+GGVAVI+VG ATE E+++RK R++DA +AT AA+EEGIVPGGG AL+  S+ +  I  K ++ D++ G +IV+KAL APA  IA NA            +  ++  G+++ T +Y ++++ G+IDP KV R A+QNAASVA +++TT+A+V E PK
Sbjct:  350 KAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEIEVKERKDRVDDAMHATRAAVEEGIVPGGGVALLRASEQLKRI--KTQNDDQKTGVEIVRKALSAPARQIAINAGEDGSVIVGKVLEKDQYNYGFDSQTGEYGDLVKKGIIDPTKVVRTAIQNAASVAALLITTEAMVAELPK 527          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH601_RHOPB (60 kDa chaperonin 1 OS=Rhodopseudomonas palustris (strain BisB18) GN=groL1 PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.286e-39
Identity = 87/185 (47.03%), Postives = 128/185 (69.19%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXD-SEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNSG 603
            K    ET S YD EKL ER+AKL+GGVAVI+VG ATE E+++RK R++DA +AT AA+EEGI+PGGG AL+  S+ +  I  K ++ D++ G +IV+KAL  PA  IA NA            +  +++ G+++ + +Y +M++ G+IDP KV R A+QNAASVA +++TT+A++ E PK  N+G
Sbjct:  350 KAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEIEVKERKDRVDDAMHATRAAVEEGILPGGGVALLRASEQLKRI--KTQNDDQKTGVEIVRKALSWPARQIAINAGEDGSVIVGKILEKDQYSYGFDSQSGEYGDMVKKGIIDPTKVVRAAIQNAASVAALLITTEAMIAELPKKGNAG 532          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_NITEC (60 kDa chaperonin OS=Nitrosomonas eutropha (strain C91) GN=groL PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.679e-39
Identity = 90/185 (48.65%), Postives = 120/185 (64.86%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNSGS 606
            ++   E  S YD EKL ER+AKL+GGVA+IKVGAATE E++++K R+EDA +AT AA+EEGIVPGGG AL+   D V   K K ++ D+  G  IV +AL  P   I  N             + +   GYNA T +Y +++  GV+DP KVTR ALQNA+SVAG++LTT A+V E PK  + G+
Sbjct:  350 RKQIEEATSDYDREKLQERVAKLAGGVALIKVGAATEMEMKEKKARVEDAFHATRAAVEEGIVPGGGVALLRTIDAVS--KAKGDNHDQDSGIKIVLRALEEPLRQIVTNCGDEASVVVNKVKEGKGNFGYNAATGEYGDLVAMGVLDPTKVTRSALQNASSVAGLILTTDAMVAELPKEDSPGA 532          
The following BLAST results are available for this feature:
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH601_RHISN1.274e-3949.7160 kDa chaperonin 1 OS=Rhizobium sp. (strain NGR23... [more]
CH60_THISH1.286e-3947.7560 kDa chaperonin OS=Thioalkalivibrio sp. (strain ... [more]
CH60_SCAIO1.286e-3953.4560 kDa chaperonin OS=Scardovia inopinata GN=groL P... [more]
CH60_METSS1.286e-3949.4460 kDa chaperonin OS=Methylovorus sp. (strain SS1 ... [more]
CH60_BUCCM1.286e-3944.9760 kDa chaperonin OS=Buchnera aphidicola subsp. Ch... [more]
CH603_BURCH1.286e-3950.0060 kDa chaperonin 3 OS=Burkholderia cenocepacia (s... [more]
CH602_BURCA1.286e-3950.0060 kDa chaperonin 2 OS=Burkholderia cenocepacia (s... [more]
CH601_RHOPS1.286e-3948.8960 kDa chaperonin 1 OS=Rhodopseudomonas palustris ... [more]
CH601_RHOPB1.286e-3947.0360 kDa chaperonin 1 OS=Rhodopseudomonas palustris ... [more]
CH60_NITEC1.679e-3948.6560 kDa chaperonin OS=Nitrosomonas eutropha (strain... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00110 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00110 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623019 ID=BQ623019; Name=BQ623019; organism=Citrus sinensis; type=EST; length=650bp
TGCTGATGCTGCATCAAAGGATGAAATACAAGCTAGAATTGCACAGCCTG
AAAAAGGAGTTGGCGTGAGACGGATTCTGTTTATGACTCAGAGAAACTTG
CTGAGAGAATTGCTAAATTGTCTGGCGGGGTTGCTGTTATTAAAGTTGGA
GCTGCCACAGAAACTGAGCTTGAGGACCGTAAACTCCGTATTGAAGATGC
CAAGAATGCAACTTTTGCAGCCATAGAGGAAGGTATTGTTCCTGGTGGTG
GTGCTGCTCTGGTTCATCTGTCTGATCATGTTCCTGCTATCAAGGACAAG
CTTGAAGATGCAGATGAGCGATTAGGTGCTGACATTGTGCAGAAGGCACT
GGTAGCACCTGCATCACTGATAGCTCACAATGCTGGAGTTGAAGGTGAGG
TTGTTGTGGAGAAGGTGAAAGATAGTGAATGGACGACTGGTTACAATGCA
ATGACAGACAAGTATGAGAACATGCTTCAGGCTGGAGTTATTGATCCTGC
CAAGGTGACAAGATGTGCATTGCAGAATGCGGCTTCAGTTGCAGGAATGG
TCCTGACCACTCAGGCTATTGTCGTGGAGAAGCCCAAAGCCCAAAACTCC
GGTAGCCGCTCCGACACAAGGTCTTATGGGGTAATCTCTAGGACTCTTCC
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