BQ623019

Overview
NameBQ623019
Unique NameBQ623019
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length650
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_BACFN (60 kDa chaperonin OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=groL PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.679e-39
Identity = 91/186 (48.92%), Postives = 117/186 (62.90%), Query Frame = 1
Query:   25 NTS*NCTA*KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEK 582
            N    C   K     T S YD EKL ER+AKLSGGVAV+ VGAA+E E++++K R++DA  AT AAIEEGIV GGG A +   + +  +K   E+ DE  G  I+++A+  P   I  NA            + +   GYNA TD YENM  AGV+DPAKVTR AL+NAAS+AGM LTT+ ++VEK
Sbjct:  341 NIKERCDQIKAQIAATKSDYDREKLQERLAKLSGGVAVLYVGAASEVEMKEKKDRVDDALRATRAAIEEGIVAGGGVAYIRAIESLDGLKG--ENDDETTGIAIIKRAIEEPLRQIVANAGKEGAVVVQKVSEGKGDFGYNARTDVYENMHAAGVVDPAKVTRVALENAASIAGMFLTTECVIVEK 524          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_ACIF5 (60 kDa chaperonin OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=groL PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.679e-39
Identity = 87/179 (48.60%), Postives = 116/179 (64.80%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            +R   +  S YD EKL ER+AKL+GGVAVIKVGA +E E++++K R+EDA +AT AA+EEGIVPGGG ALV     +   K    D D  +G  I+++A+  P   I  NA            D +   GYNA TD+Y +M + GVIDP KVTR ALQ A+S+AG+++TT+A+V E PK
Sbjct:  350 RRQMEDASSDYDREKLQERVAKLAGGVAVIKVGAGSEMEMKEKKARVEDALHATRAAVEEGIVPGGGVALVRARHALEGFKTANHDQD--MGVAIIRRAIEEPLRQIVANAGGEGSVVLNKVVDGKDGYGYNAATDEYGDMFEMGVIDPTKVTRTALQKASSIAGLMITTEAMVTELPK 526          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_ACIF2 (60 kDa chaperonin OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=groL PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.679e-39
Identity = 87/179 (48.60%), Postives = 116/179 (64.80%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            +R   +  S YD EKL ER+AKL+GGVAVIKVGA +E E++++K R+EDA +AT AA+EEGIVPGGG ALV     +   K    D D  +G  I+++A+  P   I  NA            D +   GYNA TD+Y +M + GVIDP KVTR ALQ A+S+AG+++TT+A+V E PK
Sbjct:  350 RRQMEDASSDYDREKLQERVAKLAGGVAVIKVGAGSEMEMKEKKARVEDALHATRAAVEEGIVPGGGVALVRARHALEGFKTANHDQD--MGVAIIRRAIEEPLRQIVANAGGEGSVVLNKVVDGKDGYGYNAATDEYGDMFEMGVIDPTKVTRTALQKASSIAGLMITTEAMVTELPK 526          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH605_RHIME (60 kDa chaperonin 5 OS=Rhizobium meliloti GN=groL5 PE=2 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 1.679e-39
Identity = 86/177 (48.59%), Postives = 126/177 (71.19%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXD-SEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQ 594
            ET S YD EKL ER+AKL+GGVAVI+VG +TE E++++K R++DA +AT AA+EEGI+PGGG AL+     +  +  K  + D+R+G D+V++A+ AP   IA NA            + +E++ G+NA T++Y ++   GVIDPAKV R ALQ+AASVAG+++TT+A++ EKPK +
Sbjct:  355 ETTSDYDREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRVDDALHATRAAVEEGILPGGGVALLRAVKALDGL--KTANNDQRVGVDLVRRAIEAPVRQIAENAGAEGSIIVGKLREKTEFSYGWNAQTNEYGDLYAMGVIDPAKVVRTALQDAASVAGLLVTTEAMIAEKPKKE 529          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH603_RHIL3 (60 kDa chaperonin 3 OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=groL3 PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.679e-39
Identity = 91/177 (51.41%), Postives = 128/177 (72.32%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDA--DERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXD-SEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            ET S YD EKL ER+AKL+GGVAVI+VG +TE E++++K R++DA +AT AA+EEGI+PGGG AL+     V A+ D +E A  D+R+G DIV++A+ APA  IA NA            + SE++ G+NA T +Y ++   GVIDPAKV R ALQ+AAS+AG+++TT+A++ EKP+
Sbjct:  355 ETTSDYDREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRVDDALHATRAAVEEGILPGGGVALLRA---VKAL-DNVETANGDQRVGVDIVRRAVEAPARQIAENAGAEGSVIVGKLREKSEFSYGWNAQTGEYGDLYAQGVIDPAKVVRTALQDAASIAGLLVTTEAMIAEKPR 527          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH601_BURP1 (60 kDa chaperonin 1 OS=Burkholderia pseudomallei (strain 1710b) GN=groL1 PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.679e-39
Identity = 89/174 (51.15%), Postives = 114/174 (65.52%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            E  S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEGIVPGGG AL+     + ++     +AD+  G  IV +A+  P   I  N               +   GYNA T +Y +M++AGV+DP KVTR ALQNAASVAG++LTT A V E PK
Sbjct:  355 EATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALIRARTAIASLTG--VNADQNAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGKGNYGYNAATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAELPK 526          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH601_BURP0 (60 kDa chaperonin 1 OS=Burkholderia pseudomallei (strain 1106a) GN=groL1 PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.679e-39
Identity = 89/174 (51.15%), Postives = 114/174 (65.52%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            E  S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEGIVPGGG AL+     + ++     +AD+  G  IV +A+  P   I  N               +   GYNA T +Y +M++AGV+DP KVTR ALQNAASVAG++LTT A V E PK
Sbjct:  355 EATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALIRARTAIASLTG--VNADQNAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGKGNYGYNAATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAELPK 526          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_TERTT (60 kDa chaperonin OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=groL PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.193e-39
Identity = 88/180 (48.89%), Postives = 122/180 (67.78%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKD-KLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            ++   ET S YD+EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEG+VPGGG +L+     V AI D + E+ D+  G  I ++A+ AP   I  NA              E   GYNA +  Y +ML+ G++DPAKVTR ALQ A S+AG+++TT+A+V +KP+
Sbjct:  350 RKQIEETSSEYDAEKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVSLMRA---VAAIADLQGENEDQTAGVAIARRAMEAPLRQIVTNAGEEASVVAEKVRGGEGNFGYNAGSGVYGDMLEMGILDPAKVTRTALQAAGSIAGLMITTEAMVADKPE 526          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_STRM5 (60 kDa chaperonin OS=Stenotrophomonas maltophilia (strain R551-3) GN=groL PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.193e-39
Identity = 87/179 (48.60%), Postives = 119/179 (66.48%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            K   ++T S YD EKL ER+AKL+GGVAVIKVGA+TE E++++K R++DA +AT AA+EEG+VPGGG ALV     +  +K   ED +   G  I  +A+ AP   I  NA            +   + GYNA T ++ +MLQ G++DP KVTR ALQNAAS+AG+++TT+A+V E PK
Sbjct:  350 KTQIQDTSSDYDREKLQERVAKLAGGVAVIKVGASTEIEMKEKKDRVDDALHATRAAVEEGVVPGGGVALVRAVSALAGLKGANEDQNH--GIQIALRAMEAPLREIVANAGEEPSVIVNKVKEGTGSFGYNAATGEFGDMLQFGILDPTKVTRSALQNAASIAGLMITTEAMVAEAPK 526          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_PSEPW (60 kDa chaperonin OS=Pseudomonas putida (strain W619) GN=groL PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.193e-39
Identity = 88/189 (46.56%), Postives = 124/189 (65.61%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKD-KLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNSGSRSDTRSYG 630
            ET S YD EKL ER+AKL+GGVAVIKVGA TE E++++K R+EDA +AT AA+EEG+VPGGG ALV     + AI D K ++ D+ +G  ++++A+ AP   I  NA                  GYNA T +Y +M++ G++DPAKVTR ALQ AAS+ G+++TT+A+V + P+ + +G   D    G
Sbjct:  355 ETSSDYDREKLQERLAKLAGGVAVIKVGAGTEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRA---LAAIVDLKGDNEDQNVGIALLRRAVEAPLRQITANAGDEPSVVADKVKQGSGNYGYNAATGEYGDMIEMGILDPAKVTRSALQAAASIGGLMITTEAMVADLPEDKPAGGMPDMGGMG 540          
The following BLAST results are available for this feature:
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_BACFN1.679e-3948.9260 kDa chaperonin OS=Bacteroides fragilis (strain ... [more]
CH60_ACIF51.679e-3948.6060 kDa chaperonin OS=Acidithiobacillus ferrooxidan... [more]
CH60_ACIF21.679e-3948.6060 kDa chaperonin OS=Acidithiobacillus ferrooxidan... [more]
CH605_RHIME1.679e-3948.5960 kDa chaperonin 5 OS=Rhizobium meliloti GN=groL5... [more]
CH603_RHIL31.679e-3951.4160 kDa chaperonin 3 OS=Rhizobium leguminosarum bv.... [more]
CH601_BURP11.679e-3951.1560 kDa chaperonin 1 OS=Burkholderia pseudomallei (... [more]
CH601_BURP01.679e-3951.1560 kDa chaperonin 1 OS=Burkholderia pseudomallei (... [more]
CH60_TERTT2.193e-3948.8960 kDa chaperonin OS=Teredinibacter turnerae (stra... [more]
CH60_STRM52.193e-3948.6060 kDa chaperonin OS=Stenotrophomonas maltophilia ... [more]
CH60_PSEPW2.193e-3946.5660 kDa chaperonin OS=Pseudomonas putida (strain W6... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00110 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00110 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623019 ID=BQ623019; Name=BQ623019; organism=Citrus sinensis; type=EST; length=650bp
TGCTGATGCTGCATCAAAGGATGAAATACAAGCTAGAATTGCACAGCCTG
AAAAAGGAGTTGGCGTGAGACGGATTCTGTTTATGACTCAGAGAAACTTG
CTGAGAGAATTGCTAAATTGTCTGGCGGGGTTGCTGTTATTAAAGTTGGA
GCTGCCACAGAAACTGAGCTTGAGGACCGTAAACTCCGTATTGAAGATGC
CAAGAATGCAACTTTTGCAGCCATAGAGGAAGGTATTGTTCCTGGTGGTG
GTGCTGCTCTGGTTCATCTGTCTGATCATGTTCCTGCTATCAAGGACAAG
CTTGAAGATGCAGATGAGCGATTAGGTGCTGACATTGTGCAGAAGGCACT
GGTAGCACCTGCATCACTGATAGCTCACAATGCTGGAGTTGAAGGTGAGG
TTGTTGTGGAGAAGGTGAAAGATAGTGAATGGACGACTGGTTACAATGCA
ATGACAGACAAGTATGAGAACATGCTTCAGGCTGGAGTTATTGATCCTGC
CAAGGTGACAAGATGTGCATTGCAGAATGCGGCTTCAGTTGCAGGAATGG
TCCTGACCACTCAGGCTATTGTCGTGGAGAAGCCCAAAGCCCAAAACTCC
GGTAGCCGCTCCGACACAAGGTCTTATGGGGTAATCTCTAGGACTCTTCC
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