BQ623019

Overview
NameBQ623019
Unique NameBQ623019
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length650
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_MARMM (60 kDa chaperonin OS=Maricaulis maris (strain MCS10) GN=groL PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.193e-39
Identity = 91/185 (49.19%), Postives = 125/185 (67.57%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNSG 603
            +R   ET S YD EKL ER+AKL+GGVAVIKVG ATE E++++K R++DA NAT AA+EEGIVPGGG AL+  S  +  ++   ++AD+  G  IV +AL +P   IA N+            ++   T G+NA T++Y +ML  GVIDPAKV R ALQ+AASVA +++TT+A V + PK + +G
Sbjct:  350 RRQSEETTSDYDREKLQERLAKLAGGVAVIKVGGATEIEVKEKKDRVDDALNATRAAVEEGIVPGGGVALLKASAKLAGLEG--DNADQTQGIAIVARALQSPIRQIATNSGVEGSIVVGKVMENPSATFGFNAQTEEYGDMLAFGVIDPAKVVRTALQDAASVASLLITTEAAVADAPKEEGAG 532          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_FLAPJ (60 kDa chaperonin OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=groL PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.193e-39
Identity = 92/185 (49.73%), Postives = 123/185 (66.49%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKD-KLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNSG 603
            K     + S YD EKL ER+AKL+GGVAV+ VGAA+E E++++K R++DA +AT AA+EEGIV GGG AL+   +    +KD K ++ADE  G  IV +A+ AP   I  NA            +     GYNA TD+Y +ML+AG+IDP KVTR AL+NAASVAGM+LTT+  +VE  K +N+G
Sbjct:  350 KGQMEASTSDYDKEKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALLRAKN---VLKDIKADNADEATGIQIVSRAVEAPLRTIVENAGLEGSVVVAKVAEGSGDFGYNAKTDEYVDMLKAGIIDPKKVTRVALENAASVAGMILTTECALVE-IKEENAG 530          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_COREQ (60 kDa chaperonin OS=Corynebacterium equii GN=groL PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.193e-39
Identity = 92/173 (53.18%), Postives = 115/173 (66.47%), Query Frame = 1
Query:   70 TDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            +DS YD EKL ER+AKL+GGVAVIK GAATE EL++RK RIEDA     AA+EEGIV GGG AL+  S   P + D   + DE  GA+IV+ AL AP   IA NA            +    +G NA T +YE++L AG+ DP KVTR ALQNAAS+A + LTT+A+V +KP+
Sbjct:  354 SDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQSS---PVLDDLKLEGDEATGANIVKVALEAPLKQIAFNAGLEPGVVAEKVRNLPAGSGLNAATGEYEDLLAAGINDPVKVTRSALQNAASIAALFLTTEAVVADKPE 523          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_BUCRM (60 kDa chaperonin OS=Buchnera aphidicola subsp. Rhopalosiphum maidis GN=groL PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.193e-39
Identity = 85/190 (44.74%), Postives = 123/190 (64.74%), Query Frame = 1
Query:   64 RETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNSGSRSDTRSYGV 633
            +E  S YD EKL ER+AKLSGGVAV+KVGAATE E++++K R+EDA +AT AA+EEG+V GGG ALV ++  +  ++   E  D+ +G  +  +A+ AP   I  N+            D +   GYNA TD+Y +M+  G++DP KVTR ALQ AASVAG+++TT+ +V + PK   +   S + + G+
Sbjct:  354 QEATSDYDKEKLNERLAKLSGGVAVLKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALVRVAGKISNLRGHNE--DQNVGIRVALRAMEAPLRQIVSNSGEEPSVVTNNVKDGKGNYGYNAATDEYGDMIDFGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKEDKTSDASSSPAGGM 541          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH602_ECOK1 (60 kDa chaperonin 2 OS=Escherichia coli O1:K1 / APEC GN=groL2 PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.193e-39
Identity = 87/181 (48.07%), Postives = 117/181 (64.64%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQ 594
            K    ET S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEGIVPGGG AL+     +  +K   ED +   G  I  +A+ AP   I  NA            +     GYNA   ++ +M++ G++DP KVTR ALQNAAS+AG+++TT+A+V E PK +
Sbjct:  350 KAQIEETTSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALIRAKAAIAELKGANEDQNH--GIAIALRAMEAPLREIVTNAGDEPSVVLNRVAEGTGAFGYNAANGEFGDMIEFGILDPTKVTRSALQNAASIAGLMITTEAMVAEAPKKE 528          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH601_NOCSJ (60 kDa chaperonin 1 OS=Nocardioides sp. (strain BAA-499 / JS614) GN=groL1 PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.193e-39
Identity = 93/194 (47.94%), Postives = 121/194 (62.37%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE-DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNSGSRSDTRSYG 630
            K     TDS +D EKL ER+AKL+GGV VIKVGAATE EL+++K RIEDA +AT AAIEEGIV GGG+ALVH    V  + D L    DE LG  +V+KA   P   IA N             +     G+NA T++Y +++  GV+DP KVTR AL NA S+AGM+LTT+ +VV+KP+ +   +      +G
Sbjct:  348 KAEVENTDSDWDREKLQERLAKLAGGVCVIKVGAATEVELKEKKHRIEDAVSATRAAIEEGIVAGGGSALVHA---VSVLSDDLGLTGDEALGVRVVRKAADEPLRWIAENGGVNGYVVTTKVRELGLGNGFNAATEEYGDLVAQGVLDPVKVTRSALVNATSIAGMLLTTETLVVDKPEEEEPAAAGHGHGHG 538          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH601_METCA (60 kDa chaperonin 1 OS=Methylococcus capsulatus GN=groL1 PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.193e-39
Identity = 87/181 (48.07%), Postives = 119/181 (65.75%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQ 594
            ++   +T S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEGIVPGGG AL+     +  +K    D D  +G  I ++A+  P   I  NA            +     GYNA T +Y +M+  G++DPAKVTR ALQNAASVA +++TT+A+V E+PK +
Sbjct:  350 RKQIEDTTSDYDREKLQERLAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALIRALAKLRDLKGANHDQD--VGISIARRAMEEPLRQIVANAGDEPSVVLNKVAEGAGNFGYNAATGEYGDMVAMGILDPAKVTRSALQNAASVASLMITTEAMVAEEPKEE 528          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH601_KINRD (60 kDa chaperonin 1 OS=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) GN=groL1 PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.193e-39
Identity = 99/197 (50.25%), Postives = 121/197 (61.42%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKL-EDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK---AQNSGSRSDTRSYG 630
            K     TDS +D EKL ER+AKLSGGV VIKVGA TE EL+++K RIEDA +AT AAIEEGIV GGG+ALVH    V  ++D L    DE  G  +V+KA   P   IA NA              E  +G NA T +Y ++L AGV+DP KVTR AL+NAAS+A MVLTT  +VV+K +   A N G       +G
Sbjct:  348 KAEVERTDSDWDREKLQERLAKLSGGVVVIKVGAHTEVELKEKKHRIEDAVSATRAAIEEGIVAGGGSALVHA---VSVLEDNLGRTGDEATGVALVRKAASEPLRWIAENAGLEGYVVVEKVRSLEVGSGLNAATGEYVDLLAAGVLDPVKVTRSALRNAASIASMVLTTDTLVVDKKEEDLAVNGGGHGHGHGHG 541          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH601_BURPS (60 kDa chaperonin 1 OS=Burkholderia pseudomallei GN=groL1 PE=3 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 2.193e-39
Identity = 89/174 (51.15%), Postives = 113/174 (64.94%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            E  S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEGIVPGGG AL+     +  +     +AD+  G  IV +A+  P   I  N               +   GYNA T +Y +M++AGV+DP KVTR ALQNAASVAG++LTT A V E PK
Sbjct:  355 EATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALIRARTAIAGLTG--VNADQNAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGKGNYGYNAATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAELPK 526          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH601_BURP6 (60 kDa chaperonin 1 OS=Burkholderia pseudomallei (strain 668) GN=groL1 PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.193e-39
Identity = 89/174 (51.15%), Postives = 113/174 (64.94%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            E  S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEGIVPGGG AL+     +  +     +AD+  G  IV +A+  P   I  N               +   GYNA T +Y +M++AGV+DP KVTR ALQNAASVAG++LTT A V E PK
Sbjct:  355 EATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALIRARTAIAGLTG--VNADQNAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAAGKGNYGYNAATGEYVDMVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVAELPK 526          
The following BLAST results are available for this feature:
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_MARMM2.193e-3949.1960 kDa chaperonin OS=Maricaulis maris (strain MCS1... [more]
CH60_FLAPJ2.193e-3949.7360 kDa chaperonin OS=Flavobacterium psychrophilum ... [more]
CH60_COREQ2.193e-3953.1860 kDa chaperonin OS=Corynebacterium equii GN=groL... [more]
CH60_BUCRM2.193e-3944.7460 kDa chaperonin OS=Buchnera aphidicola subsp. Rh... [more]
CH602_ECOK12.193e-3948.0760 kDa chaperonin 2 OS=Escherichia coli O1:K1 / AP... [more]
CH601_NOCSJ2.193e-3947.9460 kDa chaperonin 1 OS=Nocardioides sp. (strain BA... [more]
CH601_METCA2.193e-3948.0760 kDa chaperonin 1 OS=Methylococcus capsulatus GN... [more]
CH601_KINRD2.193e-3950.2560 kDa chaperonin 1 OS=Kineococcus radiotolerans (... [more]
CH601_BURPS2.193e-3951.1560 kDa chaperonin 1 OS=Burkholderia pseudomallei G... [more]
CH601_BURP62.193e-3951.1560 kDa chaperonin 1 OS=Burkholderia pseudomallei (... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00110 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00110 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623019 ID=BQ623019; Name=BQ623019; organism=Citrus sinensis; type=EST; length=650bp
TGCTGATGCTGCATCAAAGGATGAAATACAAGCTAGAATTGCACAGCCTG
AAAAAGGAGTTGGCGTGAGACGGATTCTGTTTATGACTCAGAGAAACTTG
CTGAGAGAATTGCTAAATTGTCTGGCGGGGTTGCTGTTATTAAAGTTGGA
GCTGCCACAGAAACTGAGCTTGAGGACCGTAAACTCCGTATTGAAGATGC
CAAGAATGCAACTTTTGCAGCCATAGAGGAAGGTATTGTTCCTGGTGGTG
GTGCTGCTCTGGTTCATCTGTCTGATCATGTTCCTGCTATCAAGGACAAG
CTTGAAGATGCAGATGAGCGATTAGGTGCTGACATTGTGCAGAAGGCACT
GGTAGCACCTGCATCACTGATAGCTCACAATGCTGGAGTTGAAGGTGAGG
TTGTTGTGGAGAAGGTGAAAGATAGTGAATGGACGACTGGTTACAATGCA
ATGACAGACAAGTATGAGAACATGCTTCAGGCTGGAGTTATTGATCCTGC
CAAGGTGACAAGATGTGCATTGCAGAATGCGGCTTCAGTTGCAGGAATGG
TCCTGACCACTCAGGCTATTGTCGTGGAGAAGCCCAAAGCCCAAAACTCC
GGTAGCCGCTCCGACACAAGGTCTTATGGGGTAATCTCTAGGACTCTTCC
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