BQ623019

Overview
NameBQ623019
Unique NameBQ623019
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length650
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_STRMK (60 kDa chaperonin OS=Stenotrophomonas maltophilia (strain K279a) GN=groL PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.864e-39
Identity = 87/179 (48.60%), Postives = 119/179 (66.48%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            K   ++T S YD EKL ER+AKL+GGVAVIKVGA+TE E++++K R++DA +AT AA+EEG+VPGGG ALV     +  +K   ED +   G  I  +A+ AP   I  NA            +   + GYNA T ++ +MLQ G++DP KVTR ALQNAAS+AG+++TT+A+V E PK
Sbjct:  350 KTQIQDTSSDYDREKLQERVAKLAGGVAVIKVGASTEIEMKEKKDRVDDALHATRAAVEEGVVPGGGVALVRAITALAGLKGANEDQNH--GIQIALRAMEAPLREIVANAGDEPSVIINKVKEGTGSFGYNAATGEFGDMLQFGILDPTKVTRSALQNAASIAGLMITTEAMVAEAPK 526          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_POLNS (60 kDa chaperonin OS=Polynucleobacter necessarius (strain STIR1) GN=groL PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.864e-39
Identity = 85/179 (47.49%), Postives = 117/179 (65.36%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNSG 603
            E  S YD EKL ER+AKL+GGVAVI+VGAATE E++++K R++DA +AT AA+EEGI+PGGG AL+     +  +K   ++AD+  G  IV +A+  P   I  NA             S+   GYNA T +Y +++  GVIDP KVT+ AL NAASVAG++LTT   + E PK +++G
Sbjct:  355 EATSDYDKEKLQERVAKLAGGVAVIRVGAATEVEMKEKKARVDDALHATRAAVEEGIIPGGGVALIRAMQGIKGLKG--DNADQDAGISIVLRAMQEPLRTIVSNAGEDAGVVVNAVQASKGNNGYNAATGEYGDLVAQGVIDPTKVTKAALVNAASVAGLLLTTDCAISEAPKDESAG 531          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_NITMU (60 kDa chaperonin OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=groL PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.864e-39
Identity = 88/179 (49.16%), Postives = 117/179 (65.36%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNSG 603
            E  S YD EKL ER+AKL+GGVA+IKVGAATE E++++K R+EDA +AT AA+EEGIVPGGG AL+     V  +K   ++ D+  G  IV +AL  P   I  N             +     GYNA + +Y +M+Q GV+DP KVTR ALQ+AAS+AG++LTT A+V E PK + +G
Sbjct:  355 EATSDYDKEKLQERVAKLAGGVALIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALLRTRSAVSNLKG--DNHDQDAGIKIVLRALEEPLRQIVANCGDEPSVVINKVLEGTENFGYNAASSEYGDMVQMGVLDPTKVTRYALQHAASIAGLMLTTDALVAEVPKEEGAG 531          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_CHRVI (60 kDa chaperonin OS=Chromatium vinosum GN=groL PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.864e-39
Identity = 91/204 (44.61%), Postives = 127/204 (62.25%), Query Frame = 1
Query:   40 CTA*KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKD-KLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK----AQNSGSRSDTRSYGVI 636
            C   +    ET S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEGIVPGGG ALV     + A+KD K  + D+ +G  I ++A+  P   I  NA            +     GYNA   +Y +M++ G++DP KVTR ALQN+ SVAG+++TT+A++ ++PK    A   G   D    G++
Sbjct:  346 CEQIRAQVEETSSDYDREKLQERLAKLAGGVAVIKVGAATEIEMKEKKARVEDALHATRAAVEEGIVPGGGVALVRA---IAAVKDLKGANHDQDVGIAIARRAMEEPLRQIVANAGEEPSVILHKVAEGTGNFGYNAANGEYGDMVEMGILDPTKVTRSALQNSCSVAGLMITTEAMIADEPKDDAPAMPGGGMGDMGGMGMM 546          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_BUCMP (60 kDa chaperonin OS=Buchnera aphidicola subsp. Myzus persicae GN=groL PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.864e-39
Identity = 85/190 (44.74%), Postives = 123/190 (64.74%), Query Frame = 1
Query:   64 RETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNSGSRSDTRSYGV 633
            +E  S YD EKL ER+AKLSGGVAV+KVGAATE E++++K R+EDA +AT AA+EEG+V GGG ALV ++     ++ + E  D+ +G  +  +A+ AP   I  N+            D +   GYNA TD+Y +M+  G++DP KVTR ALQ AASVAG+++TT+ +V + PK   S   + + + G+
Sbjct:  354 QEATSDYDKEKLNERLAKLSGGVAVLKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALVRVAGKTSNLRGQNE--DQNVGIRVALRAMEAPLRQIVSNSGEEPSVVTNNVKDGKGNYGYNAATDEYGDMIDFGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKEDKSSDSNSSPAGGM 541          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_BIFAA (60 kDa chaperonin OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) GN=groL PE=3 SV=3)

HSP 1 Score: 161.77 bits (408), Expect = 2.864e-39
Identity = 93/173 (53.76%), Postives = 113/173 (65.32%), Query Frame = 1
Query:   70 TDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            TDS YD EKL ER+AKL+GGVAVIKVGAATE E ++RK RIEDA     AAIEEG++PGGG AL+  +    A  D   + DE  GA IV +A+ AP   IA NA                  G NA T++YE++L AGV DP KVTR ALQNAAS+AG+ LTT+A+V  KP+
Sbjct:  354 TDSDYDREKLQERLAKLAGGVAVIKVGAATEVEAKERKHRIEDAVRNAKAAIEEGLLPGGGVALIQAA--AKAKDDVKLEGDEATGAAIVFRAVEAPIKQIAENAGLSGDVVIDKVRSLPDGQGLNAATNEYEDLLAAGVTDPVKVTRSALQNAASIAGLFLTTEAVVANKPE 524          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_ALCBS (60 kDa chaperonin OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=groL PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.864e-39
Identity = 85/185 (45.95%), Postives = 127/185 (68.65%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNSGS 606
            ++    + S YD EKL ER+AKL+GGVAVIK+GAATE E++++K R++DA +AT AA+EEG+VPGGG ALV    +V  IK   ++ ++  G  +  +AL  P   IA+NA            + +   GYNA + +Y +ML+ G++DPAKVTR ALQ AAS+AG+++TT+A+V +KP+ +N+G+
Sbjct:  349 RKEIENSSSDYDKEKLQERVAKLAGGVAVIKIGAATEIEMKEKKARVDDALHATRAAVEEGVVPGGGVALVRALANVGTIKG--DNDEQNAGIALTFRALEMPLRQIAYNAGAEASVIVQEVRNGKGNYGYNAASGEYGDMLEMGILDPAKVTRSALQAAASIAGLMITTEAMVADKPE-ENAGA 530          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH601_STRAW (60 kDa chaperonin 1 OS=Streptomyces avermitilis GN=groL1 PE=3 SV=3)

HSP 1 Score: 161.77 bits (408), Expect = 2.864e-39
Identity = 90/184 (48.91%), Postives = 123/184 (66.85%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKL-EDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNS 600
            K     TDS +D EKL ER+AKL+GGV VIKVGAATE EL+++K R+EDA +AT AA+EEGIV GGG+ALVH    V  ++  L +  DE  G  +V++A V P   IA NA            + +   G+NA T +Y +++++GVIDP KVTR AL+NAAS+A ++LTT+ +VVEKP  + +
Sbjct:  350 KAEIENTDSDWDREKLQERLAKLAGGVCVIKVGAATEVELKEKKHRLEDAISATRAAVEEGIVSGGGSALVHA---VKVLEGNLGKTGDEATGVAVVRRAAVEPLRWIAENAGLEGYVITSKVAELDKGQGFNAATGEYGDLVKSGVIDPVKVTRSALENAASIASLLLTTETLVVEKPAEEEA 530          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH601_RHORT (60 kDa chaperonin 1 OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=groL1 PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.864e-39
Identity = 88/184 (47.83%), Postives = 125/184 (67.93%), Query Frame = 1
Query:   40 CTA*KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXD-SEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            C   + +  +T S YD EKL ER+AKLSGGVAVI+VG A+E E++++K R++DA +AT AA+EEGI+ GGG AL+H +  + A+     +AD+++G +IV++AL AP   IA NA            + S+   GYNA T  YEN+++ GVIDP KV R ALQ AASVA +++TT+A+V E P+
Sbjct:  346 CAQIRATIEDTTSDYDREKLQERLAKLSGGVAVIRVGGASEVEVKEKKDRVDDAMHATRAAVEEGIIAGGGVALLHAAKALDALSP--ANADQKVGIEIVRRALQAPVRQIAENAGVDGAVVAGKLLESSDADFGYNAQTGVYENLVKVGVIDPTKVVRTALQGAASVASLLITTEAMVAEIPE 527          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH602_RHILO (60 kDa chaperonin 2 OS=Rhizobium loti GN=groL2 PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 3.670e-39
Identity = 85/182 (46.70%), Postives = 125/182 (68.68%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDS-EWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQ 594
            K    ET S YD EKL ER+AKL+GGVAVI+VG +TE E+++RK R++DA +AT AA+EEG++PGGG AL+  +  + ++  + E+ D++ G +IV++A+ AP   IA NA            +  E+  G+NA T+ + ++   GVIDP KV R ALQ+AASVAG+++TT+A+V EKPK +
Sbjct:  350 KSQIEETTSDYDKEKLQERLAKLAGGVAVIRVGGSTEVEVKERKDRVDDAMHATRAAVEEGVLPGGGVALLRAAKALDSV--QAENEDQKHGIEIVRRAIEAPVRQIAENAGAEGSIIVGKLREKPEFGWGWNAQTNAFGDLYNEGVIDPVKVVRTALQDAASVAGLLVTTEAMVAEKPKKE 529          

HSP 2 Score: 22.7126 bits (47), Expect = 3.670e-39
Identity = 9/13 (69.23%), Postives = 11/13 (84.62%), Query Frame = 2
Query:    8 AASKDEIQARIAQ 46
            A SKDEIQ R++Q
Sbjct:  336 AGSKDEIQGRVSQ 348          
The following BLAST results are available for this feature:
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_STRMK2.864e-3948.6060 kDa chaperonin OS=Stenotrophomonas maltophilia ... [more]
CH60_POLNS2.864e-3947.4960 kDa chaperonin OS=Polynucleobacter necessarius ... [more]
CH60_NITMU2.864e-3949.1660 kDa chaperonin OS=Nitrosospira multiformis (str... [more]
CH60_CHRVI2.864e-3944.6160 kDa chaperonin OS=Chromatium vinosum GN=groL PE... [more]
CH60_BUCMP2.864e-3944.7460 kDa chaperonin OS=Buchnera aphidicola subsp. My... [more]
CH60_BIFAA2.864e-3953.7660 kDa chaperonin OS=Bifidobacterium adolescentis ... [more]
CH60_ALCBS2.864e-3945.9560 kDa chaperonin OS=Alcanivorax borkumensis (stra... [more]
CH601_STRAW2.864e-3948.9160 kDa chaperonin 1 OS=Streptomyces avermitilis GN... [more]
CH601_RHORT2.864e-3947.8360 kDa chaperonin 1 OS=Rhodospirillum rubrum (stra... [more]
CH602_RHILO3.670e-3946.7060 kDa chaperonin 2 OS=Rhizobium loti GN=groL2 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00110 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00110 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623019 ID=BQ623019; Name=BQ623019; organism=Citrus sinensis; type=EST; length=650bp
TGCTGATGCTGCATCAAAGGATGAAATACAAGCTAGAATTGCACAGCCTG
AAAAAGGAGTTGGCGTGAGACGGATTCTGTTTATGACTCAGAGAAACTTG
CTGAGAGAATTGCTAAATTGTCTGGCGGGGTTGCTGTTATTAAAGTTGGA
GCTGCCACAGAAACTGAGCTTGAGGACCGTAAACTCCGTATTGAAGATGC
CAAGAATGCAACTTTTGCAGCCATAGAGGAAGGTATTGTTCCTGGTGGTG
GTGCTGCTCTGGTTCATCTGTCTGATCATGTTCCTGCTATCAAGGACAAG
CTTGAAGATGCAGATGAGCGATTAGGTGCTGACATTGTGCAGAAGGCACT
GGTAGCACCTGCATCACTGATAGCTCACAATGCTGGAGTTGAAGGTGAGG
TTGTTGTGGAGAAGGTGAAAGATAGTGAATGGACGACTGGTTACAATGCA
ATGACAGACAAGTATGAGAACATGCTTCAGGCTGGAGTTATTGATCCTGC
CAAGGTGACAAGATGTGCATTGCAGAATGCGGCTTCAGTTGCAGGAATGG
TCCTGACCACTCAGGCTATTGTCGTGGAGAAGCCCAAAGCCCAAAACTCC
GGTAGCCGCTCCGACACAAGGTCTTATGGGGTAATCTCTAGGACTCTTCC
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