BQ623019

Overview
NameBQ623019
Unique NameBQ623019
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length650
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_PSEMY (60 kDa chaperonin OS=Pseudomonas mendocina (strain ymp) GN=groL PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 3.740e-39
Identity = 83/176 (47.16%), Postives = 118/176 (67.05%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVE 579
            ++   ET S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEG+VPGGG ALV     +  +K   ++ D+ +G  ++++A+ AP   I  NA                  G+NA TD Y +M++ G++DPAKVTR ALQ AAS+ G+++TT+A+V E
Sbjct:  350 RKQVEETSSDYDKEKLQERLAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRALQAIEGLKG--DNEDQNVGIALLRRAVEAPLRQIVANAGGEPSVVVDKVKQGSGNFGFNAATDTYGDMIEMGILDPAKVTRSALQAAASIGGLMITTEAMVAE 523          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_PETMO (60 kDa chaperonin OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=groL PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 3.740e-39
Identity = 89/182 (48.90%), Postives = 118/182 (64.84%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTT-GYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQ 594
            K     T S Y+ E L ER+AKLSGGVAVIK GAATETEL+++K RIEDA +AT AA+EEGIV GGG  L+     V    + L   DE++GA +V K+L AP   I  NA            + + +  GY+ + ++Y NM ++G+IDP KVTR ALQNAAS+A M+LTT+ +V E+PK +
Sbjct:  348 KAQIENTSSDYEKETLQERLAKLSGGVAVIKAGAATETELKEKKHRIEDALSATRAAVEEGIVAGGGVTLLRAKKAVEEFANTL-SGDEKIGAQLVAKSLDAPVKQIIRNAGLEPAIIIEKIIEKDDSKYGYDVLKERYVNMFESGIIDPTKVTRSALQNAASIASMLLTTEVLVAEEPKEE 528          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_NOVAD (60 kDa chaperonin OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=groL PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 3.740e-39
Identity = 89/173 (51.45%), Postives = 120/173 (69.36%), Query Frame = 1
Query:   70 TDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNA-XXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKP 585
            T S YD EKL ER+AKL+GGVAVIKVG ATE E+++RK R++DA +AT AA+EEGIVPGGG AL++ +  +  +K    + D+  G DIV++A+ AP   IA NA             +++   G+NA TD YEN+  AGVIDP KV R ALQ+AASV+G+++TT+A + EKP
Sbjct:  356 TTSDYDREKLQERLAKLAGGVAVIKVGGATEVEVKERKDRVDDALHATRAAVEEGIVPGGGTALLYATKALEGLKG--ANDDQTKGIDIVRRAIQAPIRQIAANAGHDGAVVSGNLLRENDENQGFNAATDTYENLKAAGVIDPTKVVRTALQDAASVSGLLITTEAAISEKP 526          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_LEPBL (60 kDa chaperonin OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=groL PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 3.740e-39
Identity = 84/179 (46.93%), Postives = 119/179 (66.48%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            K+   +T S YD EKL ER+AKL+GGVAVI VGAATE E++++K R+EDA +AT AA+EEGIVPGGG  L+   + V A+K    + DE  GA I+ ++L  P  +I +NA              +   G+NA++  +E+++ AGV+DPAKV R ALQNAAS+  M+LTT+  + +KP+
Sbjct:  349 KKQIEDTTSEYDKEKLQERLAKLAGGVAVIHVGAATEVEMKEKKARVEDALSATRAAVEEGIVPGGGLTLLKAQEAVAALK---LEGDEATGAKIIFRSLEEPIRMITNNAGLEGSVIVEHAKTKKGNEGFNALSMVWEDLVSAGVVDPAKVVRSALQNAASIGSMILTTEVTITDKPE 524          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_LEPBJ (60 kDa chaperonin OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=groL PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 3.740e-39
Identity = 84/179 (46.93%), Postives = 119/179 (66.48%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            K+   +T S YD EKL ER+AKL+GGVAVI VGAATE E++++K R+EDA +AT AA+EEGIVPGGG  L+   + V A+K    + DE  GA I+ ++L  P  +I +NA              +   G+NA++  +E+++ AGV+DPAKV R ALQNAAS+  M+LTT+  + +KP+
Sbjct:  349 KKQIEDTTSEYDKEKLQERLAKLAGGVAVIHVGAATEVEMKEKKARVEDALSATRAAVEEGIVPGGGLTLLKAQEAVAALK---LEGDEATGAKIIFRSLEEPIRMITNNAGLEGSVIVEHAKTKKGNEGFNALSMVWEDLVSAGVVDPAKVVRSALQNAASIGSMILTTEVTITDKPE 524          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_LEGPN (60 kDa chaperonin OS=Legionella pneumophila GN=groL PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 3.740e-39
Identity = 85/188 (45.21%), Postives = 123/188 (65.43%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNSGSRSDTRSYG 630
            ET S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEGIV GGG AL+     + ++K   ++ D+ +G +I+++A+ +P   I  NA            + +   G+NA T +Y +M++ G++DP KVTR ALQNAASVA ++LTT+ +V + PK +      D    G
Sbjct:  354 ETTSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVAGGGVALIRAQKALDSLKG--DNDDQNMGINILRRAIESPMRQIVTNAGYEASVVVNKVAEHKDNYGFNAATGEYGDMVEMGILDPTKVTRMALQNAASVASLMLTTECMVADLPKKEEGVGAGDMGGMG 539          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_LEGPL (60 kDa chaperonin OS=Legionella pneumophila (strain Lens) GN=groL PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 3.740e-39
Identity = 85/188 (45.21%), Postives = 123/188 (65.43%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNSGSRSDTRSYG 630
            ET S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEGIV GGG AL+     + ++K   ++ D+ +G +I+++A+ +P   I  NA            + +   G+NA T +Y +M++ G++DP KVTR ALQNAASVA ++LTT+ +V + PK +      D    G
Sbjct:  354 ETTSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVAGGGVALIRAQKALDSLKG--DNDDQNMGINILRRAIESPMRQIVTNAGYEASVVVNKVAEHKDNYGFNAATGEYGDMVEMGILDPTKVTRMALQNAASVASLMLTTECMVADLPKKEEGVGAGDMGGMG 539          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_LEGPH (60 kDa chaperonin OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=groL PE=3 SV=2)

HSP 1 Score: 161.384 bits (407), Expect = 3.740e-39
Identity = 85/188 (45.21%), Postives = 123/188 (65.43%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNSGSRSDTRSYG 630
            ET S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEGIV GGG AL+     + ++K   ++ D+ +G +I+++A+ +P   I  NA            + +   G+NA T +Y +M++ G++DP KVTR ALQNAASVA ++LTT+ +V + PK +      D    G
Sbjct:  354 ETTSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVAGGGVALIRAQKALDSLKG--DNDDQNMGINILRRAIESPMRQIVTNAGYEASVVVNKVAEHKDNYGFNAATGEYGDMVEMGILDPTKVTRMALQNAASVASLMLTTECMVADLPKKEEGVGAGDMGGMG 539          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_LEGPC (60 kDa chaperonin OS=Legionella pneumophila (strain Corby) GN=groL PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 3.740e-39
Identity = 85/188 (45.21%), Postives = 123/188 (65.43%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNSGSRSDTRSYG 630
            ET S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEGIV GGG AL+     + ++K   ++ D+ +G +I+++A+ +P   I  NA            + +   G+NA T +Y +M++ G++DP KVTR ALQNAASVA ++LTT+ +V + PK +      D    G
Sbjct:  354 ETTSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVAGGGVALIRAQKALDSLKG--DNDDQNMGINILRRAIESPMRQIVTNAGYEASVVVNKVAEHKDNYGFNAATGEYGDMVEMGILDPTKVTRMALQNAASVASLMLTTECMVADLPKKEEGVGAGDMGGMG 539          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_LEGPA (60 kDa chaperonin OS=Legionella pneumophila (strain Paris) GN=groL PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 3.740e-39
Identity = 85/188 (45.21%), Postives = 123/188 (65.43%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNSGSRSDTRSYG 630
            ET S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEGIV GGG AL+     + ++K   ++ D+ +G +I+++A+ +P   I  NA            + +   G+NA T +Y +M++ G++DP KVTR ALQNAASVA ++LTT+ +V + PK +      D    G
Sbjct:  354 ETTSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVAGGGVALIRAQKALDSLKG--DNDDQNMGINILRRAIESPMRQIVTNAGYEASVVVNKVAEHKDNYGFNAATGEYGDMVEMGILDPTKVTRMALQNAASVASLMLTTECMVADLPKKEEGVGAGDMGGMG 539          
The following BLAST results are available for this feature:
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_PSEMY3.740e-3947.1660 kDa chaperonin OS=Pseudomonas mendocina (strain... [more]
CH60_PETMO3.740e-3948.9060 kDa chaperonin OS=Petrotoga mobilis (strain DSM... [more]
CH60_NOVAD3.740e-3951.4560 kDa chaperonin OS=Novosphingobium aromaticivora... [more]
CH60_LEPBL3.740e-3946.9360 kDa chaperonin OS=Leptospira borgpetersenii ser... [more]
CH60_LEPBJ3.740e-3946.9360 kDa chaperonin OS=Leptospira borgpetersenii ser... [more]
CH60_LEGPN3.740e-3945.2160 kDa chaperonin OS=Legionella pneumophila GN=gro... [more]
CH60_LEGPL3.740e-3945.2160 kDa chaperonin OS=Legionella pneumophila (strai... [more]
CH60_LEGPH3.740e-3945.2160 kDa chaperonin OS=Legionella pneumophila subsp.... [more]
CH60_LEGPC3.740e-3945.2160 kDa chaperonin OS=Legionella pneumophila (strai... [more]
CH60_LEGPA3.740e-3945.2160 kDa chaperonin OS=Legionella pneumophila (strai... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00110 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00110 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623019 ID=BQ623019; Name=BQ623019; organism=Citrus sinensis; type=EST; length=650bp
TGCTGATGCTGCATCAAAGGATGAAATACAAGCTAGAATTGCACAGCCTG
AAAAAGGAGTTGGCGTGAGACGGATTCTGTTTATGACTCAGAGAAACTTG
CTGAGAGAATTGCTAAATTGTCTGGCGGGGTTGCTGTTATTAAAGTTGGA
GCTGCCACAGAAACTGAGCTTGAGGACCGTAAACTCCGTATTGAAGATGC
CAAGAATGCAACTTTTGCAGCCATAGAGGAAGGTATTGTTCCTGGTGGTG
GTGCTGCTCTGGTTCATCTGTCTGATCATGTTCCTGCTATCAAGGACAAG
CTTGAAGATGCAGATGAGCGATTAGGTGCTGACATTGTGCAGAAGGCACT
GGTAGCACCTGCATCACTGATAGCTCACAATGCTGGAGTTGAAGGTGAGG
TTGTTGTGGAGAAGGTGAAAGATAGTGAATGGACGACTGGTTACAATGCA
ATGACAGACAAGTATGAGAACATGCTTCAGGCTGGAGTTATTGATCCTGC
CAAGGTGACAAGATGTGCATTGCAGAATGCGGCTTCAGTTGCAGGAATGG
TCCTGACCACTCAGGCTATTGTCGTGGAGAAGCCCAAAGCCCAAAACTCC
GGTAGCCGCTCCGACACAAGGTCTTATGGGGTAATCTCTAGGACTCTTCC
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