BQ623019

Overview
NameBQ623019
Unique NameBQ623019
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length650
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_GARVA (60 kDa chaperonin OS=Gardnerella vaginalis GN=groL PE=3 SV=2)

HSP 1 Score: 161.384 bits (407), Expect = 3.740e-39
Identity = 92/174 (52.87%), Postives = 114/174 (65.52%), Query Frame = 1
Query:   70 TDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE-DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            TDS YD EKL ER+AKL+GGVAVIKVGAATE E ++RK RIEDA     AAIEEG++PGGG ALV  +  V    D +    +E  GA IV +A+ AP   IA N+            +     G+NA T+ YE++L AGV DP KVTR ALQNAAS+AG+ LTT+A+V  KP+
Sbjct:  354 TDSDYDREKLQERLAKLAGGVAVIKVGAATEVEAKERKHRIEDAVRNAKAAIEEGLLPGGGVALVQAAAKVEKSADIVALSGEEATGAAIVFRAVEAPIKQIAQNSGVSGDVVLNKVRELPEGEGFNAATNTYEDLLAAGVTDPVKVTRSALQNAASIAGLFLTTEAVVANKPE 527          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_BIFLO (60 kDa chaperonin OS=Bifidobacterium longum GN=groL PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 3.740e-39
Identity = 95/182 (52.20%), Postives = 117/182 (64.29%), Query Frame = 1
Query:   70 TDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE-----DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNS 600
            TDS YD EKL ER+AKL+GGVAVIKVGAATE E ++RK RIEDA     AAIEEG++PGGG ALV  +    A  +K E       +E  GA IV +A+ AP   IA NA                  G+NA TD YE++L AGV DP KVTR ALQNAAS+AG+ LTT+A+V  KP+ +++
Sbjct:  354 TDSDYDREKLQERLAKLAGGVAVIKVGAATEVEAKERKHRIEDAVRNAKAAIEEGLLPGGGVALVQAA----AKAEKTEAVTSLTGEEATGAAIVFRAIEAPIKQIAENAGVSGDVVINTVRSLPDGEGFNAATDTYEDLLAAGVTDPVKVTRSALQNAASIAGLFLTTEAVVANKPEPKSA 531          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_BIFLD (60 kDa chaperonin OS=Bifidobacterium longum (strain DJO10A) GN=groL PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 3.740e-39
Identity = 95/182 (52.20%), Postives = 117/182 (64.29%), Query Frame = 1
Query:   70 TDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE-----DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNS 600
            TDS YD EKL ER+AKL+GGVAVIKVGAATE E ++RK RIEDA     AAIEEG++PGGG ALV  +    A  +K E       +E  GA IV +A+ AP   IA NA                  G+NA TD YE++L AGV DP KVTR ALQNAAS+AG+ LTT+A+V  KP+ +++
Sbjct:  354 TDSDYDREKLQERLAKLAGGVAVIKVGAATEVEAKERKHRIEDAVRNAKAAIEEGLLPGGGVALVQAA----AKAEKTEAVTSLTGEEATGAAIVFRAIEAPIKQIAENAGVSGDVVINTVRSLPDGEGFNAATDTYEDLLAAGVTDPVKVTRSALQNAASIAGLFLTTEAVVANKPEPKSA 531          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH602_BURPS (60 kDa chaperonin 2 OS=Burkholderia pseudomallei GN=groL2 PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 3.740e-39
Identity = 87/174 (50.00%), Postives = 116/174 (66.67%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            E  S YD EKL ER+AKL+GGVAVIKVG ATE E++++K R++DA +AT AA+EEGIVPGGG AL+ +   + A+     +AD++ G  IV +AL  P   I  NA              +   GYNA T +Y +++++GV+DP KVTR ALQNAAS+AG++LTT A V E PK
Sbjct:  355 EATSDYDREKLQERVAKLAGGVAVIKVGGATEVEVKEKKDRVDDALHATRAAVEEGIVPGGGVALIRVKQAIAALAG--ANADQKAGISIVLRALEEPLRQIVANAGEEASVVVATVAAGQGNYGYNAATGEYGDLVESGVLDPTKVTRTALQNAASIAGLLLTTDATVHEAPK 526          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH602_BURP6 (60 kDa chaperonin 2 OS=Burkholderia pseudomallei (strain 668) GN=groL2 PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 3.740e-39
Identity = 87/174 (50.00%), Postives = 116/174 (66.67%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            E  S YD EKL ER+AKL+GGVAVIKVG ATE E++++K R++DA +AT AA+EEGIVPGGG AL+ +   + A+     +AD++ G  IV +AL  P   I  NA              +   GYNA T +Y +++++GV+DP KVTR ALQNAAS+AG++LTT A V E PK
Sbjct:  355 EATSDYDREKLQERVAKLAGGVAVIKVGGATEVEVKEKKDRVDDALHATRAAVEEGIVPGGGVALIRVKQAIAALAG--ANADQKAGISIVLRALEEPLRQIVANAGEEASVVVATVAAGQGNYGYNAATGEYGDLVESGVLDPTKVTRTALQNAASIAGLLLTTDATVHEAPK 526          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH602_BURP1 (60 kDa chaperonin 2 OS=Burkholderia pseudomallei (strain 1710b) GN=groL2 PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 3.740e-39
Identity = 87/174 (50.00%), Postives = 116/174 (66.67%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            E  S YD EKL ER+AKL+GGVAVIKVG ATE E++++K R++DA +AT AA+EEGIVPGGG AL+ +   + A+     +AD++ G  IV +AL  P   I  NA              +   GYNA T +Y +++++GV+DP KVTR ALQNAAS+AG++LTT A V E PK
Sbjct:  355 EATSDYDREKLQERVAKLAGGVAVIKVGGATEVEVKEKKDRVDDALHATRAAVEEGIVPGGGVALIRVKQAIAALAG--ANADQKAGISIVLRALEEPLRQIVANAGEEASVVVATVAAGQGNYGYNAATGEYGDLVESGVLDPTKVTRTALQNAASIAGLLLTTDATVHEAPK 526          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH602_BURP0 (60 kDa chaperonin 2 OS=Burkholderia pseudomallei (strain 1106a) GN=groL2 PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 3.740e-39
Identity = 87/174 (50.00%), Postives = 116/174 (66.67%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            E  S YD EKL ER+AKL+GGVAVIKVG ATE E++++K R++DA +AT AA+EEGIVPGGG AL+ +   + A+     +AD++ G  IV +AL  P   I  NA              +   GYNA T +Y +++++GV+DP KVTR ALQNAAS+AG++LTT A V E PK
Sbjct:  355 EATSDYDREKLQERVAKLAGGVAVIKVGGATEVEVKEKKDRVDDALHATRAAVEEGIVPGGGVALIRVKQAIAALAG--ANADQKAGISIVLRALEEPLRQIVANAGEEASVVVATVAAGQGNYGYNAATGEYGDLVESGVLDPTKVTRTALQNAASIAGLLLTTDATVHEAPK 526          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH601_ERYLH (60 kDa chaperonin 1 OS=Erythrobacter litoralis (strain HTCC2594) GN=groL1 PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 3.740e-39
Identity = 88/174 (50.57%), Postives = 123/174 (70.69%), Query Frame = 1
Query:   70 TDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXD-SEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            T S YD EKL ER+AKL+GGVAVI+VG ATE E+++RK R++DA +AT AA+EEGI+PGGG AL+     +  +  K  + D++ G DIV++AL APA  IA NA            +  ++  G+NA T +YE+++++GVIDPAKV R ALQ+AASVA +++TT+A+V E PK
Sbjct:  356 TTSDYDREKLQERVAKLAGGVAVIRVGGATEVEVKERKDRVDDALHATRAAVEEGILPGGGIALLRALKSLDGL--KAANDDQQSGIDIVRRALRAPARQIAENAGEDGAYIVGKLLEGDDYNHGFNAATGEYEDLVKSGVIDPAKVVRTALQDAASVASLLITTEALVAELPK 527          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_VARPS (60 kDa chaperonin OS=Variovorax paradoxus (strain S110) GN=groL PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 4.885e-39
Identity = 88/176 (50.00%), Postives = 117/176 (66.48%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQ 594
            E  S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEG+V GGG AL+     V   K K ++AD+  G  +V KA+ AP   I +NA              +   G+NA  D Y +ML+ G++DP KVTR ALQNAASVA ++LTT+A+V + PK +
Sbjct:  355 EATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALLRAKQAV-GDKVKGDNADQDAGIKLVLKAIEAPLREIVNNAGGEASVVVNAVLAGKGNYGFNAANDTYGDMLELGILDPTKVTRTALQNAASVASLLLTTEAMVADAPKEE 529          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_RALEH (60 kDa chaperonin OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=groL PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 4.885e-39
Identity = 87/178 (48.88%), Postives = 117/178 (65.73%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNS 600
            E  S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEGIVPGGG AL+     + A+    E+AD+  G  IV +A+  P   I  NA            + +   GYNA + +Y ++++ GV+DP KVTR ALQNAASVA ++LTT   V E PK +++
Sbjct:  355 EATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALLRARAAISALTG--ENADQNAGIKIVLRAMEEPLRQIVLNAGEEASVVVAKVIEGKGNYGYNAASGEYGDLVEMGVLDPTKVTRTALQNAASVASLMLTTDCAVAESPKEESA 530          
The following BLAST results are available for this feature:
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_GARVA3.740e-3952.8760 kDa chaperonin OS=Gardnerella vaginalis GN=groL... [more]
CH60_BIFLO3.740e-3952.2060 kDa chaperonin OS=Bifidobacterium longum GN=gro... [more]
CH60_BIFLD3.740e-3952.2060 kDa chaperonin OS=Bifidobacterium longum (strai... [more]
CH602_BURPS3.740e-3950.0060 kDa chaperonin 2 OS=Burkholderia pseudomallei G... [more]
CH602_BURP63.740e-3950.0060 kDa chaperonin 2 OS=Burkholderia pseudomallei (... [more]
CH602_BURP13.740e-3950.0060 kDa chaperonin 2 OS=Burkholderia pseudomallei (... [more]
CH602_BURP03.740e-3950.0060 kDa chaperonin 2 OS=Burkholderia pseudomallei (... [more]
CH601_ERYLH3.740e-3950.5760 kDa chaperonin 1 OS=Erythrobacter litoralis (st... [more]
CH60_VARPS4.885e-3950.0060 kDa chaperonin OS=Variovorax paradoxus (strain ... [more]
CH60_RALEH4.885e-3948.8860 kDa chaperonin OS=Ralstonia eutropha (strain AT... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00110 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00110 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623019 ID=BQ623019; Name=BQ623019; organism=Citrus sinensis; type=EST; length=650bp
TGCTGATGCTGCATCAAAGGATGAAATACAAGCTAGAATTGCACAGCCTG
AAAAAGGAGTTGGCGTGAGACGGATTCTGTTTATGACTCAGAGAAACTTG
CTGAGAGAATTGCTAAATTGTCTGGCGGGGTTGCTGTTATTAAAGTTGGA
GCTGCCACAGAAACTGAGCTTGAGGACCGTAAACTCCGTATTGAAGATGC
CAAGAATGCAACTTTTGCAGCCATAGAGGAAGGTATTGTTCCTGGTGGTG
GTGCTGCTCTGGTTCATCTGTCTGATCATGTTCCTGCTATCAAGGACAAG
CTTGAAGATGCAGATGAGCGATTAGGTGCTGACATTGTGCAGAAGGCACT
GGTAGCACCTGCATCACTGATAGCTCACAATGCTGGAGTTGAAGGTGAGG
TTGTTGTGGAGAAGGTGAAAGATAGTGAATGGACGACTGGTTACAATGCA
ATGACAGACAAGTATGAGAACATGCTTCAGGCTGGAGTTATTGATCCTGC
CAAGGTGACAAGATGTGCATTGCAGAATGCGGCTTCAGTTGCAGGAATGG
TCCTGACCACTCAGGCTATTGTCGTGGAGAAGCCCAAAGCCCAAAACTCC
GGTAGCCGCTCCGACACAAGGTCTTATGGGGTAATCTCTAGGACTCTTCC
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