BQ623019

Overview
NameBQ623019
Unique NameBQ623019
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length650
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig84 contig Csv1_Contig84:377..1023. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_GLUOX (60 kDa chaperonin OS=Gluconobacter oxydans GN=groL PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 4.885e-39
Identity = 86/184 (46.74%), Postives = 125/184 (67.93%), Query Frame = 1
Query:   40 CTA*KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSE-WTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            C   +    ET S YD EKL ER+AKL+GGVAVI+VG +TE E+++RK R++DA +AT AA+EEGIVPGGG AL   S  +  +    ++ D+R+G +IV+KAL AP   IA NA            ++E +  G++A   +Y++++ AG+IDP KV R ALQ+AASV G+++TT+A+V E+P+
Sbjct:  346 CNQIRAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGSTEVEVKERKDRVDDALHATRAAVEEGIVPGGGTALARASSALKGL--TFDNDDQRVGGEIVRKALQAPLRQIAFNAGEDGAVIAGKVLENEGYVFGFDAQKGEYKDLVAAGIIDPTKVVRTALQDAASVGGLLITTEAMVAERPE 527          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_GEOSM (60 kDa chaperonin OS=Geobacter sp. (strain M21) GN=groL PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 4.885e-39
Identity = 83/178 (46.63%), Postives = 122/178 (68.54%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNS 600
            ET S YD EKL ER+AKL GGVAVIKVGAATE E++++K R+EDA +AT AA++EGIVPGGG A +     +  +++     +++ G +++++AL  P   I+ NA            + +   GYNA  D Y +M++AG+IDP KV+R ALQNAASVAG+++TT+A++ +KPK + +
Sbjct:  355 ETSSDYDREKLQERLAKLVGGVAVIKVGAATEIEMKEKKARVEDALHATRAAVDEGIVPGGGVAYLRA---MKVLENLQLAPEQQFGVNVIKRALEEPIRQISQNAGVDGSIVVDKVKNGKDAFGYNAADDVYVDMIEAGIIDPTKVSRSALQNAASVAGLMMTTEAMIADKPKEEGA 529          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_ENTGE (60 kDa chaperonin (Fragment) OS=Enterobacter gergoviae GN=groL PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 4.885e-39
Identity = 83/175 (47.43%), Postives = 116/175 (66.29%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKA 591
            E  S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEG+V GGG AL+ ++  +  +K + E  D+ +G  +  +A+ AP   I  N               +   GYNA T++Y NM+  G++DP KVTR ALQ AASVAG+++TT+ +V + PKA
Sbjct:  355 EATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALIRVASKITELKGQNE--DQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKSGDGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKA 527          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_BURP8 (60 kDa chaperonin OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=groL PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 4.885e-39
Identity = 88/174 (50.57%), Postives = 113/174 (64.94%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            E  S YD EKL ER+AKL+GGVAVIKVGAATE E++++K R+EDA +AT AA+EEGIV GGG AL+     +  +K   ++AD+  G  IV +A+  P   I  N                   GYNA T +Y ++++AGV+DP KVTR ALQNAASVAG++LTT A V E PK
Sbjct:  355 EATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVAGGGVALIRARSAISGVKG--DNADQDAGIKIVLRAMEEPLRQIVTNGGEEASVVVAAVAGGTGNYGYNAATGEYGDLVEAGVVDPTKVTRTALQNAASVAGLLLTTDAAVCELPK 526          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH602_MYCLE (60 kDa chaperonin 2 OS=Mycobacterium leprae GN=groL2 PE=3 SV=3)

HSP 1 Score: 160.999 bits (406), Expect = 4.885e-39
Identity = 96/188 (51.06%), Postives = 122/188 (64.89%), Query Frame = 1
Query:   70 TDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLE-DADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNSGSRSDTRSYG 630
            +DS YD EKL ER+AKL+GGVAVIK GAATE EL++RK RIEDA     AA+EEGIV GGG  L+  +   PA+ DKL+   DE  GA+IV+ AL AP   IA N+            +     G NA T +YE++L+AGV DP KVTR ALQNAAS+AG+ LTT+A+V +KP+   + +   T   G
Sbjct:  354 SDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVTLLQAA---PAL-DKLKLTGDEATGANIVKVALEAPLKQIAFNSGMEPGVVAEKVRNLSVGHGLNAATGEYEDLLKAGVADPVKVTRSALQNAASIAGLFLTTEAVVADKPEKTAAPASDPTGGMG 537          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH602_BURCM (60 kDa chaperonin 2 OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=groL2 PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 4.885e-39
Identity = 88/174 (50.57%), Postives = 115/174 (66.09%), Query Frame = 1
Query:   67 ETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            E  S YD EKL ER+AKL+GGVAVIKVG ATE E++++K R++DA +AT AA+EEGIVPGGG AL+ +   +  +K    +AD+  G  IV +AL  P   I  NA            +     GYNA T +Y +++++GV+DP KVTR ALQNAASVAG++LTT A V E PK
Sbjct:  355 EATSDYDREKLQERVAKLAGGVAVIKVGGATEIEVKEKKDRVDDALHATRAAVEEGIVPGGGVALIRVRQAIRELKG--ANADQDAGIKIVLRALEEPLRQIVTNAGEEASVVVAKVAEGSGNFGYNAQTGEYGDLVESGVLDPTKVTRTALQNAASVAGLLLTTDATVFEAPK 526          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH601_ROSS1 (60 kDa chaperonin 1 OS=Roseiflexus sp. (strain RS-1) GN=groL1 PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 4.885e-39
Identity = 90/192 (46.88%), Postives = 126/192 (65.62%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNA-----XXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKAQNSGSRS 612
            K+    T S YD EKL ER+AKLSGGVAVIKVGA TE  L++RK R+EDA NAT AA+EEGIVPGGG AL++    +  ++ + E  +ER+  +I+++AL  P   +A NA                  +    G++ MT KY +++QAG+IDPAKV R AL+NA SVAG+VLTT A++ + P+ + +G+R+
Sbjct:  349 KQQIETTTSDYDREKLQERVAKLSGGVAVIKVGAPTEPALKERKARVEDALNATRAAVEEGIVPGGGIALLNAIPALDNVQTQFE--EERMALNILRRALEEPLRQLAINAGEDGSVVVNQVRTLQREHNNPNYGFDVMTGKYVDLMQAGIIDPAKVVRTALENAVSVAGIVLTTDALITDAPEPKKNGART 538          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH601_CHLAA (60 kDa chaperonin 1 OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=groL1 PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 4.885e-39
Identity = 86/179 (48.04%), Postives = 124/179 (69.27%), Query Frame = 1
Query:   70 TDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKD-KLEDADERLGADIVQKALVAPASLIAHNA-----XXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            T S +D EKL ER+AKL+GGVAVIKVGAATE EL+++K R+EDA +AT AA+EEGIVPGGG AL++    +PA+ + ++   DE++G  I+++AL  P  ++A NA                   + T GYN +T +Y +M++ G+IDP KVTR A+QNA S+AGM+LTT+A++ + P+
Sbjct:  354 TTSDFDREKLQERLAKLAGGVAVIKVGAATEPELKEKKHRVEDALSATRAAVEEGIVPGGGVALINA---IPALDNVQVAHEDEKVGLQILRRALEEPLRILARNAGEDGSVIIANVRRLQEEKGDKTIGYNVLTGQYGSMIEQGIIDPVKVTRSAVQNAVSIAGMILTTEALITDIPE 529          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH601_AZOC5 (60 kDa chaperonin 1 OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=groL1 PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 4.885e-39
Identity = 87/179 (48.60%), Postives = 119/179 (66.48%), Query Frame = 1
Query:   52 KRSWRETDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPK 588
            K    ET S YD EKL ER+AKL+GGVAVI+VG +TE E++++K R++DA NAT AA+EEGIVPGGG AL+     V A+    E+ D   G  IV +AL AP   IA N+            +SE   G+NA T++Y +++  GV+DPAKV R ALQ+A+SVA +++TT+A++ E PK
Sbjct:  350 KAQIEETSSDYDREKLQERLAKLAGGVAVIRVGGSTEVEVKEKKDRVDDALNATRAAVEEGIVPGGGVALLRAKKAVEALSS--ENPDIAAGIKIVLRALEAPIRQIAENSGVEGSIVVGKVLESEGNFGFNAQTEQYVDLVAEGVVDPAKVVRTALQDASSVASLLVTTEALIAELPK 526          
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Match: CH60_SULNB (60 kDa chaperonin OS=Sulfurovum sp. (strain NBC37-1) GN=groL PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 6.380e-39
Identity = 95/175 (54.29%), Postives = 121/175 (69.14%), Query Frame = 1
Query:   70 TDSVYDSEKLAERIAKLSGGVAVIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNA-XXXXXXXXXXXXDSEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAIVVEKPKA 591
            T S YD EKL ER+AKLSGGVAVIKVGAATETE++++K R++DA +AT AA++EGIV GGGAAL   S    A+K  LE  DE +GA+I+ +A+ AP   IA NA             +SE   G+NA T +Y NML+AG+IDP KV R ALQNA SVA ++LTT+A V +  +A
Sbjct:  355 TTSEYDKEKLQERLAKLSGGVAVIKVGAATETEMKEKKDRVDDALSATKAAVDEGIVIGGGAALAKAS---KAVKLDLEH-DEAVGAEIILRAVYAPMKQIAQNAGFDAGVVADKIANNSEANLGFNAATGEYVNMLEAGIIDPLKVARVALQNATSVASLLLTTEATVSDIKEA 525          
The following BLAST results are available for this feature:
BLAST of BQ623019 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_GLUOX4.885e-3946.7460 kDa chaperonin OS=Gluconobacter oxydans GN=groL... [more]
CH60_GEOSM4.885e-3946.6360 kDa chaperonin OS=Geobacter sp. (strain M21) GN... [more]
CH60_ENTGE4.885e-3947.4360 kDa chaperonin (Fragment) OS=Enterobacter gergo... [more]
CH60_BURP84.885e-3950.5760 kDa chaperonin OS=Burkholderia phymatum (strain... [more]
CH602_MYCLE4.885e-3951.0660 kDa chaperonin 2 OS=Mycobacterium leprae GN=gro... [more]
CH602_BURCM4.885e-3950.5760 kDa chaperonin 2 OS=Burkholderia ambifaria (str... [more]
CH601_ROSS14.885e-3946.8860 kDa chaperonin 1 OS=Roseiflexus sp. (strain RS-... [more]
CH601_CHLAA4.885e-3948.0460 kDa chaperonin 1 OS=Chloroflexus aurantiacus (s... [more]
CH601_AZOC54.885e-3948.6060 kDa chaperonin 1 OS=Azorhizobium caulinodans (s... [more]
CH60_SULNB6.380e-3954.2960 kDa chaperonin OS=Sulfurovum sp. (strain NBC37-... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00110 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00110 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623019 ID=BQ623019; Name=BQ623019; organism=Citrus sinensis; type=EST; length=650bp
TGCTGATGCTGCATCAAAGGATGAAATACAAGCTAGAATTGCACAGCCTG
AAAAAGGAGTTGGCGTGAGACGGATTCTGTTTATGACTCAGAGAAACTTG
CTGAGAGAATTGCTAAATTGTCTGGCGGGGTTGCTGTTATTAAAGTTGGA
GCTGCCACAGAAACTGAGCTTGAGGACCGTAAACTCCGTATTGAAGATGC
CAAGAATGCAACTTTTGCAGCCATAGAGGAAGGTATTGTTCCTGGTGGTG
GTGCTGCTCTGGTTCATCTGTCTGATCATGTTCCTGCTATCAAGGACAAG
CTTGAAGATGCAGATGAGCGATTAGGTGCTGACATTGTGCAGAAGGCACT
GGTAGCACCTGCATCACTGATAGCTCACAATGCTGGAGTTGAAGGTGAGG
TTGTTGTGGAGAAGGTGAAAGATAGTGAATGGACGACTGGTTACAATGCA
ATGACAGACAAGTATGAGAACATGCTTCAGGCTGGAGTTATTGATCCTGC
CAAGGTGACAAGATGTGCATTGCAGAATGCGGCTTCAGTTGCAGGAATGG
TCCTGACCACTCAGGCTATTGTCGTGGAGAAGCCCAAAGCCCAAAACTCC
GGTAGCCGCTCCGACACAAGGTCTTATGGGGTAATCTCTAGGACTCTTCC
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