BQ623043
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of BQ623043 vs. ExPASy Swiss-Prot
Match: RLA0_PODAN (60S acidic ribosomal protein P0 OS=Podospora anserina PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.674e-11 Identity = 47/178 (26.40%), Postives = 85/178 (47.75%), Query Frame = 2 Query: 23 NSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRFFL-GSNKVMQVALGRSVSDEIQPGLHKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEP----FLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATF 541 + ++ +E YKSI++ S +N+ + + E R+ ++ L G N +++ AL + D P ++ F+ GN G TN +E+ + AR G+ A V +P G MEP F + G+P ++ +G +E+ +D + E G + P A +L +L I T+ Sbjct: 13 DKLKGLLEEYKSIFIVSVDNVSSQQMHEIRQALRDQGVVLMGKNTMVRRALKTFLVD--SPEYERLLPFVKGNVGFVFTNGDLKEIRDKILANKVAAPARAGAVAPVDVWIPAG-----NTGMEPGKTSFFQALGVPTKIARGTIEITTDLKLVEAGAKVGPSEATLLNMLNISPFTY 183
BLAST of BQ623043 vs. ExPASy Swiss-Prot
Match: RLA0_THEON (Acidic ribosomal protein P0 homolog OS=Thermococcus onnurineus (strain NA1) GN=rplP0 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.869e-11 Identity = 44/189 (23.28%), Postives = 89/189 (47.09%), Query Frame = 2 Query: 2 EHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRFF-LGSNKVMQVALGRSVSDEIQPGLHKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRW 565 E K+ V + N +++Y I + N+ + RE+++ + N ++++A+ R+ + +P L K+ + G G+ T M ++ L + + A+ G V +P GP + ++ G+P R+ KG V + D+ V + G+ ++ + ARIL LGI+ L+L+ + Sbjct: 6 EWKKKEVEELTNIIKSYPVIALVDVANVPAYPLSKMREKLRGKALLRVSRNTLIELAIKRAAQELGKPELEKLIDHIQGGAGILATEMNPFKLYKLLEESKTPAPAKPGVPVPRDVVIPAGPTSISPGPLVGEMQALGIPARIEKGKVSIQKDYTVLKAGEVITEQLARILNALGIEPLEVGLNLLAAY 194
BLAST of BQ623043 vs. ExPASy Swiss-Prot
Match: RLA0_PYRFU (Acidic ribosomal protein P0 homolog OS=Pyrococcus furiosus GN=rplP0 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.869e-11 Identity = 49/209 (23.44%), Postives = 97/209 (46.41%), Query Frame = 2 Query: 2 EHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRFFL--GSNKVMQVALGRSVSDEIQPGLHKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYRE---GLDESD 613 E K+ V + N +++Y + + +M + R I+ + L N ++++A+ + + +P L K+ ++ G G+ +T M ++ + A+ G+ + V +P GP + ++ G+P R+ +G V + D VV + G+ ++PE A IL LGI+ L L+ + ED +Y +DES+ Sbjct: 6 EWKKKEVEELANLIKSYPVVALVDVSSMPAYPLSQMRRLIRENNGLLRVSRNTLIELAIKKVAQELGKPELEKLINYIEGGAGILVTTMNPFKLYKFLQQNRQPAPAKPGAKVPKDVVIPAGPTSLAPGPIVGQMQAMGIPARIERGKVTIQKDTVVLKAGEEITPELANILNALGIQPLEVGLDLLAVY--EDGIIYTPDVLAIDESE 212
BLAST of BQ623043 vs. ExPASy Swiss-Prot
Match: RLA0_PYRKO (Acidic ribosomal protein P0 homolog OS=Pyrococcus kodakaraensis GN=rplP0 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.359e-11 Identity = 48/208 (23.08%), Postives = 98/208 (47.12%), Query Frame = 2 Query: 2 EHKEVIVNSIRNAVENYKSIYVFSFENMRNLKFKEFREQIKPSRFF-LGSNKVMQVALGRSVSDEIQPGLHKVSKFLCGNTGLFLTNMPKEEVESLFNKYEDYDFARTGSTATEKVELPEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPESARILRLLGIKMATFKLHLICRWSAEDFELYRE---GLDESD 613 E K+ V + N +++Y I + + + R++++ + N ++++A+ R+ + QP L K+ + G + T M ++ L + + A+ G+ + V +P GP + ++ G+P R+ KG V + D+ V + G+ ++ + ARIL LGI+ L+L+ + ED +Y +DES+ Sbjct: 6 EWKKKEVEELANIIKSYPVIALVDVAGVPAYPLSKMRDKLRGKALLRVSRNTLIELAIKRAAQELGQPELEKLIDHIQGGAAILATEMNPFKLYKLLEESKTPAPAKAGAVVPKDVVIPAGPTSLAPGPLVGEMQALGIPARIEKGKVSIQKDYTVLKAGEVITEQLARILNALGIEPLEVGLNLLAAY--EDGIVYTPDVLAIDESE 211 The following BLAST results are available for this feature:
BLAST of BQ623043 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >BQ623043 ID=BQ623043; Name=BQ623043; organism=Citrus sinensis; type=EST; length=695bpback to top |