BQ623045

Overview
NameBQ623045
Unique NameBQ623045
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length614
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7790 contig Csv1_Contig7790:324..937. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623045 vs. ExPASy Swiss-Prot
Match: PERA_IPOBA (Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.205e-18
Identity = 70/199 (35.18%), Postives = 92/199 (46.23%), Query Frame = 2
Query:    5 RGFEVVDDMKAAVERACPGV-VSCADILTIAAEESVALSGGPAWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQCRTFSDRLFNFXXXXXXXXXXXXXXXXXXXXXXXXXXNGSVLTNLDVTTPDLFDNKYFFNLQISKGLLQSDQELFSTPGADTTAIGNVFSSNQAAF 598
            RGF V++  K  V+   P + VSCADIL+IAA +S     G  +T  LGR+D+RTAN T AN  L GPN +L     +F   G N   ++VAL G+HT G A+C       F                            N + L  LD  TP  +D +YF ++   +GLL SD EL    G  T A    +     AF
Sbjct:  132 RGFAVIEQAKQNVKTQMPDMSVSCADILSIAARDSFEKFSGSTYTVTLGRKDARTANFTGANTQLVGPNENLTSQLTKFAAKGFNGT-EMVALLGSHTIGFARCPLLCISTF-----------INPARVSTLNCNCSGTVNATGLVGLD-PTPTTWDQRYFSDVVNDQGLLFSDNELLK--GNTTNAAVRRYRDAMGAF 315          
BLAST of BQ623045 vs. ExPASy Swiss-Prot
Match: PER8_ARATH (Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.087e-17
Identity = 45/110 (40.91%), Postives = 65/110 (59.09%), Query Frame = 2
Query:    5 RGFEVVDDMKAAVERACPGVVSCADILTIAAEESVALSGGPAWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQCRTFSDRL 334
            RGFE++D+ K  +E  CP  VSCADI+TIA  +S+AL+GGP +    GRRD   +N   ++  L GP  S+      F+++G N +  +  + G HT G A C  F DR+
Sbjct:   94 RGFEIIDEAKKELELVCPKTVSCADIVTIATRDSIALAGGPKFKVRTGRRDGLRSNP--SDVKLLGPTVSVATSIKAFKSIGFNVSTMVALIGGGHTVGVAHCSLFQDRI 201          
BLAST of BQ623045 vs. ExPASy Swiss-Prot
Match: PERN_IPOBA (Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 7.931e-17
Identity = 64/188 (34.04%), Postives = 86/188 (45.74%), Query Frame = 2
Query:    5 RGFEVVDDMKAAVERACPGV-VSCADILTIAAEESVALSGGPAWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQCRTFSDRLFNFXXXXXXXXXXXXXXXXXXXXXXXXXXNGSVLTNLDVTTPDLFDNKYFFNLQISKGLLQSDQELFSTPGADTTAI 565
            RGF V+D  K   +  C    VSCAD+L IAA ++        +   LGR+D+RTAN T AN  LP P ++L     +F + G N   ++V L+GAHT G ++C                                    N + L  LD  +P  FD KYF  L   +GLL SDQEL  +  A  TA+
Sbjct:  133 RGFSVIDQAKRNAQTKCADTPVSCADVLAIAARDAFRKFTNQTYNITLGRQDARTANLTGANTQLPAPFDNLSIQTAKFADKGFNQR-EMVVLAGAHTVGFSRCAVL-----------CTSTNLNQNRSATLQCTCPASANDTGLVGLD-PSPGTFDKKYFEELVKGQGLLFSDQELMQS-NATVTAV 306          
BLAST of BQ623045 vs. ExPASy Swiss-Prot
Match: PER60_ARATH (Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.936e-16
Identity = 58/182 (31.87%), Postives = 90/182 (49.45%), Query Frame = 2
Query:    5 RGFEVVDDMKAAVERACPGVVSCADILTIAAEESVAL-SGGPAWTNL-LGRRDSRTANRTLANENLPGPNNSLERLKDRF--RNVGLNDNFDLVALSGAHTFGRAQCRTFSDRLFNFXXXXXXXXXXXXXXXXXXXXXXXXXXNGSVLTNLD--VTTPDLFDNKYFFNLQISKGLLQSDQEL 532
            RG+EV+DD+K+AVE+ C  VVSCADI+ +A  + V L SGG     +  GR D + ++  L   +LP P  ++     +F  R + LN   D+V L G HT G   C    DRL+NF                          +   + +LD   T+ +  D  ++  +++S+G+L  DQ+L
Sbjct:   97 RGYEVIDDIKSAVEKECDRVVSCADIIALATRDLVTLASGGKTRYEIPTGRLDGKISSALLV--DLPSPKMTVAETAAKFDQRKLSLN---DMVLLLGGHTIGVTHCSFIMDRLYNFQNTQKPDPSMDPKLVEELSAKCPKSSSTDGIISLDQNATSSNTMDVSFYKEIKVSRGVLHIDQKL 273          
BLAST of BQ623045 vs. ExPASy Swiss-Prot
Match: PERX_WHEAT (Peroxidase (Fragment) OS=Triticum aestivum PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 6.714e-16
Identity = 42/78 (53.85%), Postives = 51/78 (65.38%), Query Frame = 2
Query:    5 RGFEVVDDMKAAVERACPGVVSCADILTIAAEESVALSGGPAWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRF 238
            RGF V+D +K  +E  C   VSCADILT+AA +SV   GGP+WT  LGRRDS  AN   AN +LPG N+S   L+  F
Sbjct:    3 RGFGVIDSIKTQIEAICNQTVSCADILTVAARDSVVALGGPSWTVPLGRRDSIDANEAEANSDLPGFNSSRSELEAAF 80          
BLAST of BQ623045 vs. ExPASy Swiss-Prot
Match: PER2_MAIZE (Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.768e-16
Identity = 65/192 (33.85%), Postives = 91/192 (47.40%), Query Frame = 2
Query:    5 RGFEVVDDMKAAVERACPGVVSCADILTIAAEE-SVALSGGPAWTNL-LGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQCRTF-SDRLFNFXXXXXXXXXXXXXXXXXXXXXXXXXXNGSVLTNLDVTTPDLFDNKYFFNLQISKGLLQSDQELFSTPGADTTAIGN 571
            RGFE++D +K A+E ACPGVVSCADI+  AA + S  LS G    ++  GR D   +N + + + L  P ++L  L   F   G++   DLV LSGAHT GR+ C +F SDRL                             +       DV TP+  D +Y+ N+     L  SD  L ++P      + N
Sbjct:  109 RGFELIDAIKDALEAACPGVVSCADIIAFAARDASCFLSQGKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLE-DLVVLSGAHTVGRSHCSSFVSDRL-----DVPSDINPALAAFLRTRCPPNTTTSDDPTVMQDVVTPNAMDIQYYKNVLSHTVLFTSDAALLTSPETAKLVLDN 294          
BLAST of BQ623045 vs. ExPASy Swiss-Prot
Match: PER21_ARATH (Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.496e-15
Identity = 57/181 (31.49%), Postives = 83/181 (45.86%), Query Frame = 2
Query:    5 RGFEVVDDMKAAVERACPGVVSCADILTIAAEESVALSGGPAWTNL-LGRRDSRTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQCRTFSDRLFNFXXXXXXXXXXXXXXXXXXXXXXXXXXNGSVLTNLDVTTPDLFDNKYFFNLQISKGLLQSDQELFSTP 544
            R F+ V  +K A+E+ CP  VSCADI+ ++A + + +  GP    +  GRRDSR +        +P  N+SL  +   F ++G+ D    VAL GAH+ GR  C     RL+                            N  + +  D  TP + DN Y+ N+   KGLL  D EL + P
Sbjct:  102 RNFKYVKIIKDALEKECPSTVSCADIVALSARDGIVMLKGPKIEMIKTGRRDSRGSYLGDVETLIPNHNDSLSSVISTFNSIGI-DVEATVALLGAHSVGRVHCVNLVHRLY--PTIDPTLDPSYALYLKKRCPSPTPDPNAVLYSRNDRETPMVVDNMYYKNIMAHKGLLVIDDELATDP 279          
BLAST of BQ623045 vs. ExPASy Swiss-Prot
Match: PER29_ARATH (Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 2.640e-12
Identity = 55/201 (27.36%), Postives = 88/201 (43.78%), Query Frame = 2
Query:   14 EVVDDMKAAVERACPGVVSCADILTIAAEESVALSGGPAWTNLLGRRDS-RTANRTLANENLPGPNNSLERLKDRFRNVGLNDNFDLVALSGAHTFGRAQCRTFSDRLFNFXXXXXXXXXXXXXXXXXXXXXXXXXXNGSVLTNL-DVTTPDLFDNKYFFNLQISKGLLQSDQELFSTP---------GADTTAIGNVFSS 583
            ++V  +K ++E  CP  VSC+D++ +AA ++VAL+GGP  +  LGR+DS  T ++ +A+  LP     ++     F N G+    + VA+ GAHT G   C     R  N                             +  T + +  T  +FD  Y+ +    +G L+ D E+ + P          AD     N FSS
Sbjct:  114 DLVGSIKTSLELECPKQVSCSDVIILAARDAVALTGGPLISVPLGRKDSLSTPSKHVADSELPPSTADVDTTLSLFANKGMTIE-ESVAIMGAHTIGVTHCNNVLSRFDNANATSENMDPRFQTFLRVACPEFSPTSQAAEATFVPNDQTSVIFDTAYYDDAIAGRGNLRIDSEIGADPRTRPFVEAFAADQDRFFNAFSS 313          
BLAST of BQ623045 vs. ExPASy Swiss-Prot
Match: PER2_HORVU (Peroxidase 2 (Fragment) OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.003e-11
Identity = 45/114 (39.47%), Postives = 55/114 (48.25%), Query Frame = 2
Query:  257 DNFDLVALSGAHTFGRAQCRTFSDRLFNFXXXXXXXXXXXXXXXXXXXXXXXXXXNGSVLTNLDVTTPDLFDNKYFFNLQISKGLLQSDQELFSTPGADTTAIGNVFSSNQAAF 598
            D  DLV+LSGAHTFG A C  F DR                              +G++   LDV TPD+FDNKY+F+L   +GL +SDQ L   P   T  +   FS NQ AF
Sbjct:   13 DVADLVSLSGAHTFGVAHCPAFEDRSSRVRHNPAIDGKFATALRNKCSGDNP---SGTLTQKLDVRTPDVFDNKYYFDLIARQGLFKSDQGLIDHP--TTKRMATRFSLNQGAF 121          
The following BLAST results are available for this feature:
BLAST of BQ623045 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PERA_IPOBA4.205e-1835.18Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PER8_ARATH2.087e-1740.91Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 ... [more]
PERN_IPOBA7.931e-1734.04Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PER60_ARATH3.936e-1631.87Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=... [more]
PERX_WHEAT6.714e-1653.85Peroxidase (Fragment) OS=Triticum aestivum PE=3 SV... [more]
PER2_MAIZE8.768e-1633.85Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1[more]
PER21_ARATH1.496e-1531.49Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=... [more]
PER29_ARATH2.640e-1227.36Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=... [more]
PER2_HORVU1.003e-1139.47Peroxidase 2 (Fragment) OS=Hordeum vulgare PE=2 SV... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00136 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00136 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623045 ID=BQ623045; Name=BQ623045; organism=Citrus sinensis; type=EST; length=614bp
GGCGAGGGGTTTTGAAGTTGTTGATGACATGAAAGCTGCGGTTGAAAGGG
CCTGTCCAGGCGTTGTTTCCTGTGCTGATATTCTTACTATTGCAGCTGAA
GAATCTGTTGCTCTGTCAGGGGGTCCTGCATGGACAAATCTATTGGGAAG
AAGAGACAGCAGAACAGCAAACAGGACTCTTGCAAATGAAAATCTTCCAG
GACCGAACAATAGTCTTGAGAGGCTCAAAGATAGATTCAGAAATGTTGGC
CTCAACGACAATTTTGATCTTGTTGCACTCTCCGGAGCTCACACATTTGG
AAGGGCTCAGTGCCGAACTTTTAGCGATAGATTATTCAATTTCAACAACA
CTGGCAATCCAGACCCAACACTTAACACAACCCTCTTACAGCAACTTAGG
CAACTATGCCCACAAGGTGGAAACGGCAGCGTTCTAACTAATCTTGATGT
CACAACACCTGATTTGTTTGACAACAAATACTTCTTCAATCTTCAAATCA
GCAAGGGCCTTCTGCAGAGTGATCAAGAGTTGTTTTCGACTCCCGGTGCC
GATACCACTGCCATTGGCAATGTCTTTAGTAGCAACCAGGCTGCTTTCTC
TAAAGCTTTGTGAT
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