BQ623048

Overview
NameBQ623048
Unique NameBQ623048
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length662
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623048 vs. ExPASy Swiss-Prot
Match: PDC1_KLUMA (Pyruvate decarboxylase OS=Kluyveromyces marxianus GN=PDC1 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.098e-15
Identity = 52/150 (34.67%), Postives = 79/150 (52.67%), Query Frame = 2
Query:  143 LAWSVGATLGYAQAAKD----KRVIACIGDGSFQVTAQEISTMIRCGQRSIIFLINNGGYTIEVEIH--DGPYNVIKNWDYTGLVNAIHNGEGKCWTAKVRSEDELTEAMKTATGEQKDSLCFIEVFVHKDDTSKELLEWGSRVSAANSR 574
            + ++ GATLG A AA++    KRVI  IGDGS Q+T QEISTMIR G +  +F++NN GYTIE  IH     YN I++W +  L+     G       +V +  E  +       ++   +  IEV +   D    L++     ++ N++
Sbjct:  415 IGFTGGATLGAAFAAEEIDPKKRVILFIGDGSLQLTVQEISTMIRWGLKPYLFVLNNDGYTIERLIHGETAQYNCIQSWKHLDLLPTF--GAKDYEAVRVATTGEWNKLTTDKKFQENSKIRLIEVMLPVMDAPSNLVKQAQLTASINAK 562          

HSP 2 Score: 24.2534 bits (51), Expect = 1.098e-15
Identity = 13/37 (35.14%), Postives = 18/37 (48.65%), Query Frame = 1
Query:   37 ETPAVIAETGDSWFNCQKLRLPENCGYEFQMQYGSIG 147
            E   V+ ETG S F   +   P +     Q+ +GSIG
Sbjct:  380 EGDVVLTETGTSAFGINQTHFPNDTYGISQVLWGSIG 416          
BLAST of BQ623048 vs. ExPASy Swiss-Prot
Match: KDC_MYCLE (Alpha-keto-acid decarboxylase OS=Mycobacterium leprae GN=kdc PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.853e-15
Identity = 46/128 (35.94%), Postives = 70/128 (54.69%), Query Frame = 2
Query:  143 LAWSVGATLGYAQAAKDKRVIACIGDGSFQVTAQEISTMIRCGQRSIIFLINNGGYTIEVEIH--DGPYNVIKNWDYTGLVNAIHNGEGKCWTAKVRSEDELTEAMKTATGEQKDSLCFIEVFVHKDD 520
            + +++ A LG   A +++R +  +GDG+ Q+T QE+ +  R G   +I ++NN GYTIE  IH    PYN I  W +T +  A+  G     + +  +  EL EA   A  E KD + F+EV V K D
Sbjct:  417 IGYTLPAALGAGLAHRNRRTVLLLGDGAAQLTIQELGSFYREGLSPVIVVVNNDGYTIERAIHGATAPYNNIARWRWTDIPGAL--GVANHSSFRAETYGELDEAFAVA-AELKDQMVFVEVIVPKLD 541          

HSP 2 Score: 25.409 bits (54), Expect = 1.853e-15
Identity = 15/44 (34.09%), Postives = 23/44 (52.27%), Query Frame = 1
Query:   22 RTC*VETPA--VIAETGDSWFNCQKLRLPENCGYEFQMQYGSIG 147
            R C   TP   V+A+ G +++   + RLP    +  Q  +GSIG
Sbjct:  375 RLCAALTPGNVVLADQGTAFYGMVEHRLPRGVTFIGQPLWGSIG 418          
BLAST of BQ623048 vs. ExPASy Swiss-Prot
Match: KDC_MYCTU (Alpha-keto-acid decarboxylase OS=Mycobacterium tuberculosis GN=kdc PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 6.869e-15
Identity = 46/127 (36.22%), Postives = 71/127 (55.91%), Query Frame = 2
Query:  140 PLAWSVGATL----GYAQAAKDKRVIACIGDGSFQVTAQEISTMIRCGQRSIIFLINNGGYTIEVEIH--DGPYNVIKNWDYTGLVNAIHNGEGKCWTAKVRSEDELTEAMKTATGEQKDSLCFIEV 502
            PL  S+G TL    G A A  D+R +  IGDG+ Q+T QE+ T  R G   +I ++NN GYT+E  IH    PYN I +W++T L +A+  G       + ++  +L +A+ T    ++D +  +EV
Sbjct:  416 PLWGSIGYTLPAAVGAAVAHPDRRTVLLIGDGAAQLTVQELGTFSREGLSPVIVVVNNDGYTVERAIHGETAPYNDIVSWNWTELPSAL--GVTNHLAFRAQTYGQLDDAL-TVAAARRDRMVLVEV 539          

HSP 2 Score: 27.335 bits (59), Expect = 6.869e-15
Identity = 16/44 (36.36%), Postives = 23/44 (52.27%), Query Frame = 1
Query:   22 RTC*VETPA--VIAETGDSWFNCQKLRLPENCGYEFQMQYGSIG 147
            R C   TP   V+A+ G S++     RLP+   +  Q  +GSIG
Sbjct:  379 RVCSALTPGNVVLADQGTSFYGMADHRLPQGVTFIGQPLWGSIG 422          
BLAST of BQ623048 vs. ExPASy Swiss-Prot
Match: KDC_MYCTA (Alpha-keto-acid decarboxylase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=kdc PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 6.869e-15
Identity = 46/127 (36.22%), Postives = 71/127 (55.91%), Query Frame = 2
Query:  140 PLAWSVGATL----GYAQAAKDKRVIACIGDGSFQVTAQEISTMIRCGQRSIIFLINNGGYTIEVEIH--DGPYNVIKNWDYTGLVNAIHNGEGKCWTAKVRSEDELTEAMKTATGEQKDSLCFIEV 502
            PL  S+G TL    G A A  D+R +  IGDG+ Q+T QE+ T  R G   +I ++NN GYT+E  IH    PYN I +W++T L +A+  G       + ++  +L +A+ T    ++D +  +EV
Sbjct:  416 PLWGSIGYTLPAAVGAAVAHPDRRTVLLIGDGAAQLTVQELGTFSREGLSPVIVVVNNDGYTVERAIHGETAPYNDIVSWNWTELPSAL--GVTNHLAFRAQTYGQLDDAL-TVAAARRDRMVLVEV 539          

HSP 2 Score: 27.335 bits (59), Expect = 6.869e-15
Identity = 16/44 (36.36%), Postives = 23/44 (52.27%), Query Frame = 1
Query:   22 RTC*VETPA--VIAETGDSWFNCQKLRLPENCGYEFQMQYGSIG 147
            R C   TP   V+A+ G S++     RLP+   +  Q  +GSIG
Sbjct:  379 RVCSALTPGNVVLADQGTSFYGMADHRLPQGVTFIGQPLWGSIG 422          
BLAST of BQ623048 vs. ExPASy Swiss-Prot
Match: KDC_MYCBP (Alpha-keto-acid decarboxylase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=kdc PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 6.869e-15
Identity = 46/127 (36.22%), Postives = 71/127 (55.91%), Query Frame = 2
Query:  140 PLAWSVGATL----GYAQAAKDKRVIACIGDGSFQVTAQEISTMIRCGQRSIIFLINNGGYTIEVEIH--DGPYNVIKNWDYTGLVNAIHNGEGKCWTAKVRSEDELTEAMKTATGEQKDSLCFIEV 502
            PL  S+G TL    G A A  D+R +  IGDG+ Q+T QE+ T  R G   +I ++NN GYT+E  IH    PYN I +W++T L +A+  G       + ++  +L +A+ T    ++D +  +EV
Sbjct:  416 PLWGSIGYTLPAAVGAAVAHPDRRTVLLIGDGAAQLTVQELGTFSREGLSPVIVVVNNDGYTVERAIHGETAPYNDIVSWNWTELPSAL--GVTNHLAFRAQTYGQLDDAL-TVAAARRDRMVLVEV 539          

HSP 2 Score: 27.335 bits (59), Expect = 6.869e-15
Identity = 16/44 (36.36%), Postives = 23/44 (52.27%), Query Frame = 1
Query:   22 RTC*VETPA--VIAETGDSWFNCQKLRLPENCGYEFQMQYGSIG 147
            R C   TP   V+A+ G S++     RLP+   +  Q  +GSIG
Sbjct:  379 RVCSALTPGNVVLADQGTSFYGMADHRLPQGVTFIGQPLWGSIG 422          
BLAST of BQ623048 vs. ExPASy Swiss-Prot
Match: KDC_MYCBO (Alpha-keto-acid decarboxylase OS=Mycobacterium bovis GN=kdc PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 6.869e-15
Identity = 46/127 (36.22%), Postives = 71/127 (55.91%), Query Frame = 2
Query:  140 PLAWSVGATL----GYAQAAKDKRVIACIGDGSFQVTAQEISTMIRCGQRSIIFLINNGGYTIEVEIH--DGPYNVIKNWDYTGLVNAIHNGEGKCWTAKVRSEDELTEAMKTATGEQKDSLCFIEV 502
            PL  S+G TL    G A A  D+R +  IGDG+ Q+T QE+ T  R G   +I ++NN GYT+E  IH    PYN I +W++T L +A+  G       + ++  +L +A+ T    ++D +  +EV
Sbjct:  416 PLWGSIGYTLPAAVGAAVAHPDRRTVLLIGDGAAQLTVQELGTFSREGLSPVIVVVNNDGYTVERAIHGETAPYNDIVSWNWTELPSAL--GVTNHLAFRAQTYGQLDDAL-TVAAARRDRMVLVEV 539          

HSP 2 Score: 27.335 bits (59), Expect = 6.869e-15
Identity = 16/44 (36.36%), Postives = 23/44 (52.27%), Query Frame = 1
Query:   22 RTC*VETPA--VIAETGDSWFNCQKLRLPENCGYEFQMQYGSIG 147
            R C   TP   V+A+ G S++     RLP+   +  Q  +GSIG
Sbjct:  379 RVCSALTPGNVVLADQGTSFYGMADHRLPQGVTFIGQPLWGSIG 422          
BLAST of BQ623048 vs. ExPASy Swiss-Prot
Match: KDC_MYCS2 (Alpha-keto-acid decarboxylase OS=Mycobacterium smegmatis GN=kdc PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.501e-14
Identity = 49/146 (33.56%), Postives = 77/146 (52.74%), Query Frame = 2
Query:  143 LAWSVGATLGYAQAAKDKRVIACIGDGSFQVTAQEISTMIRCGQRSIIFLINNGGYTIEVEIH--DGPYNVIKNWDYTGLVNAIHNGEGKCWTAKVRSEDELTEAMKTATGEQKDSLCFIEVFVHKDDTSKELLEWGSRVSAANSR 574
            + +++ A LG   A +D+R +  IGDG+ Q+T QE+    R G   ++ ++NN GYT+E  IH     YN I  W +T L  A+  G     T +  +  EL +A+ T   E +D + F+EV + + D    L E     SAAN++
Sbjct:  413 IGYTLPAALGAGLADRDRRTVLLIGDGAAQLTVQELGAFGREGLTPVVVVVNNNGYTVERAIHGVTARYNDITAWRWTELPAAL--GVPDALTFRCATYGELDDAL-TVAAETQDRMVFVEVMLERMDIPPLLGELAQSASAANAK 555          
BLAST of BQ623048 vs. ExPASy Swiss-Prot
Match: KDC_MYCUA (Alpha-keto-acid decarboxylase OS=Mycobacterium ulcerans (strain Agy99) GN=kdc PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.291e-14
Identity = 43/128 (33.59%), Postives = 69/128 (53.91%), Query Frame = 2
Query:  143 LAWSVGATLGYAQAAKDKRVIACIGDGSFQVTAQEISTMIRCGQRSIIFLINNGGYTIEVEIH--DGPYNVIKNWDYTGLVNAIHNGEGKCWTAKVRSEDELTEAMKTATGEQKDSLCFIEVFVHKDD 520
            + +++ A LG A A  D+R +  IGDG+ Q+T QE+    R G   +I ++NN GYT+E  IH     YN I +W +T +  A+  G       +  +  EL +A+ TA  EQ+D +  +E  + + D
Sbjct:  421 IGYTLPAALGAAVAHPDRRTVLLIGDGAAQLTVQELGIFSREGLSPVIVVVNNDGYTVERAIHGETATYNDIVSWRWTDVPGAL--GVTNHLAMRAENYGELDDAL-TAAAEQQDRMVVVEAVLPRLD 545          

HSP 2 Score: 26.9498 bits (58), Expect = 4.291e-14
Identity = 16/44 (36.36%), Postives = 23/44 (52.27%), Query Frame = 1
Query:   22 RTC*VETPA--VIAETGDSWFNCQKLRLPENCGYEFQMQYGSIG 147
            R C   TP   V+A+ G S++     RLP+   +  Q  +GSIG
Sbjct:  379 RLCEALTPGNVVLADQGTSFYGMADHRLPQGVTFIGQPLWGSIG 422          
BLAST of BQ623048 vs. ExPASy Swiss-Prot
Match: DCIP_ENTCL (Indole-3-pyruvate decarboxylase OS=Enterobacter cloacae GN=ipdC PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.241e-13
Identity = 54/173 (31.21%), Postives = 93/173 (53.76%), Query Frame = 2
Query:   35 WRHLQ*SLKLETLGLTVRSSASPRIVDMNFRCSMD----PLAWSVGATL----GYAQAAKDKRVIACIGDGSFQVTAQEISTMIRCGQRSIIFLINNGGYTIEVEIH--DGPYNVIKNWDYTGLVNAIH-NGEGKCWTAKVRSEDELTEAMKTATGEQKDSLCFIEVFVHKDD 520
            WR LQ  ++   + L  + +++   +D+     ++    PL  S+G TL    G   A  ++RVI   GDG+ Q+T QE+ +M+R  Q  II ++NN GYT+E  IH  +  YN I  W++T +  A+  + + +CW  +V   ++L + ++     ++ SL  IEV + K D
Sbjct:  366 WRTLQTFIRPGDIILADQGTSAFGAIDLRLPADVNFIVQPLWGSIGYTLAAAFGAQTACPNRRVIVLTGDGAAQLTIQELGSMLRDKQHPIILVLNNEGYTVERAIHGAEQRYNDIALWNWTHIPQALSLDPQSECW--RVSEAEQLADVLEKVAHHERLSL--IEVMLPKAD 534          
BLAST of BQ623048 vs. ExPASy Swiss-Prot
Match: THI3_YEAST (Thiamine metabolism regulatory protein THI3 OS=Saccharomyces cerevisiae GN=THI3 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 1.665e-12
Identity = 43/138 (31.16%), Postives = 69/138 (50.00%), Query Frame = 2
Query:  155 VGATLGYAQAAKDK------RVIACIGDGSFQVTAQEISTMIRCGQRSIIFLINNGGYTIEVEIH---DGPYNVIKNWDYTGLVNAIHNGEGKCWTAKVRSEDELTEAMKTATGEQKDSLCFIEVFVHKDDTSKELLE 541
            +GA     +  KDK      RVI  +GDG+FQ+T QE+ST+++ G    IF++NN GY+++  +H   D  Y  I+ W+Y GL+     G     T K+ +  E    +        D +  IE+ +   D  + LL+
Sbjct:  434 LGAEFAVQEINKDKFPATKHRVILFMGDGAFQLTVQELSTIVKWGLTPYIFVMNNQGYSVDRFLHHRSDASYYDIQPWNYLGLLRVF--GCTNYETKKIITVGEFRSMISDPNFATNDKIRMIEIMLPPRDVPQALLD 569          

HSP 2 Score: 25.0238 bits (53), Expect = 1.665e-12
Identity = 13/33 (39.39%), Postives = 17/33 (51.52%), Query Frame = 1
Query:   49 VIAETGDSWFNCQKLRLPENCGYEFQMQYGSIG 147
            +I ETG S F   + R P N     Q  +GS+G
Sbjct:  395 IITETGASAFGVNQTRFPVNTLGISQALWGSVG 427          
The following BLAST results are available for this feature:
BLAST of BQ623048 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
PDC1_KLUMA1.098e-1534.67Pyruvate decarboxylase OS=Kluyveromyces marxianus ... [more]
KDC_MYCLE1.853e-1535.94Alpha-keto-acid decarboxylase OS=Mycobacterium lep... [more]
KDC_MYCTU6.869e-1536.22Alpha-keto-acid decarboxylase OS=Mycobacterium tub... [more]
KDC_MYCTA6.869e-1536.22Alpha-keto-acid decarboxylase OS=Mycobacterium tub... [more]
KDC_MYCBP6.869e-1536.22Alpha-keto-acid decarboxylase OS=Mycobacterium bov... [more]
KDC_MYCBO6.869e-1536.22Alpha-keto-acid decarboxylase OS=Mycobacterium bov... [more]
KDC_MYCS22.501e-1433.56Alpha-keto-acid decarboxylase OS=Mycobacterium sme... [more]
KDC_MYCUA4.291e-1433.59Alpha-keto-acid decarboxylase OS=Mycobacterium ulc... [more]
DCIP_ENTCL1.241e-1331.21Indole-3-pyruvate decarboxylase OS=Enterobacter cl... [more]
THI3_YEAST1.665e-1231.16Thiamine metabolism regulatory protein THI3 OS=Sac... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00139 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00139 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623048 ID=BQ623048; Name=BQ623048; organism=Citrus sinensis; type=EST; length=662bp
ATGTTCTCTTCAAACACATTCAGGACATGCTGAGTGGAGACACCTGCAGT
AATCGCTGAAACTGGAGACTCTTGGTTTAACTGTCAGAAGCTCCGCCTCC
CCGAGAATTGTGGATATGAATTTCAGATGCAGTATGGATCCATTGGCCTG
GTCAGTTGGTGCCACCCTAGGATATGCTCAGGCTGCTAAAGATAAGCGTG
TGATTGCTTGCATTGGTGATGGAAGTTTCCAGGTAACTGCTCAGGAGATA
TCAACGATGATTCGATGTGGACAAAGGAGCATCATATTCCTTATCAACAA
TGGCGGGTATACAATTGAAGTAGAGATTCATGATGGGCCTTACAATGTGA
TTAAGAACTGGGATTATACTGGCCTGGTAAATGCCATCCACAATGGAGAA
GGAAAATGCTGGACTGCCAAGGTGCGGAGTGAAGATGAACTAACAGAAGC
AATGAAGACAGCTACTGGAGAACAAAAAGATTCTCTATGTTTTATCGAAG
TATTTGTGCACAAGGATGACACCAGCAAAGAGCTGCTGGAGTGGGGATCC
AGGGTTTCTGCAGCCAACAGCCGCCCTCCAAATCCTCAATAGCACTTTGA
AGTGTTGAGGATTTTGAGTTTCTGTTATTTCAACTGCAGTATTCTTGGCC
TATATCCTAAAA
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