BQ623048

Overview
NameBQ623048
Unique NameBQ623048
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length662
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623048 vs. ExPASy Swiss-Prot
Match: PDC1_SCHPO (Putative pyruvate decarboxylase C13A11.06 OS=Schizosaccharomyces pombe GN=SPAC13A11.06 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 6.155e-12
Identity = 49/152 (32.24%), Postives = 69/152 (45.39%), Query Frame = 2
Query:  143 LAWSVGATLGYAQAAKD-----KRVIACIGDGSFQVTAQEISTMIRCGQRSIIFLINNGGYTIEVEIH--DGPYNVIK-NWDYTGLVNAIHNGEGKCWTAKVRSEDELTEAMKTATGEQKDSLCFIEVFVHKDDTSKELLEWGSRVSAANSR 574
            + +SVGA  G   A  D     +R I  +GDGS Q+T  EIST IR   + IIF+INN GYTIE  IH     YN I   W Y  +       E    T  V++  ++ +          D +  +E+ +   D  + L+E     S  N +
Sbjct:  420 IGYSVGAMFGAVLAVHDSKEPDRRTILVVGDGSLQLTITEISTCIRHNLKPIIFIINNDGYTIERLIHGLHASYNEINTKWGYQQIPKFFGAAENHFRTYCVKTPTDVEKLFSDKEFANADVIQVVELVMPMLDAPRVLVEQAKLTSKINKQ 571          

HSP 2 Score: 23.0978 bits (48), Expect = 6.155e-12
Identity = 12/33 (36.36%), Postives = 18/33 (54.55%), Query Frame = 1
Query:   49 VIAETGDSWFNCQKLRLPENCGYEFQMQYGSIG 147
            +I ETG + F     R P++     Q+ +GSIG
Sbjct:  389 LITETGTANFGVLDCRFPKDVTAISQVLWGSIG 421          
BLAST of BQ623048 vs. ExPASy Swiss-Prot
Match: PDC_ASPPA (Pyruvate decarboxylase OS=Aspergillus parasiticus GN=pdcA PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.812e-12
Identity = 56/155 (36.13%), Postives = 74/155 (47.74%), Query Frame = 2
Query:  140 PLAW-SVG----ATLGYAQAAKD------------KRVIACIGDGSFQVTAQEISTMIRCGQRSIIFLINNGGYTIEVEIH--DGPYNVIKNWDY---TGLVNAIHNGEGKCWTAKVRSEDELTEAMKTATGEQKDSLCFIEVFVHKDDTSKELL 538
            P  W S+G    A LG + A +D             R I  IGDGSFQ+T QE+ST+I      IIFLINN GYTIE  IH  +  YN +  W Y        A  +GE K  T +VR+  +L   +  +       L  +EVF+ + D    L+
Sbjct:  407 PATWLSIGYMLPAALGASHAQRDLVASDQYHSLSNPRTILFIGDGSFQMTVQELSTIIHQKLNVIIFLINNDGYTIERCIHGRNQAYNDVAPWRYLKAAEFFGADQDGEYKASTWEVRTWADLDRVLNDSQLADGKGLRMVEVFMERLDAPDVLM 561          
The following BLAST results are available for this feature:
BLAST of BQ623048 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
PDC1_SCHPO6.155e-1232.24Putative pyruvate decarboxylase C13A11.06 OS=Schiz... [more]
PDC_ASPPA6.812e-1236.13Pyruvate decarboxylase OS=Aspergillus parasiticus ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00139 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00139 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623048 ID=BQ623048; Name=BQ623048; organism=Citrus sinensis; type=EST; length=662bp
ATGTTCTCTTCAAACACATTCAGGACATGCTGAGTGGAGACACCTGCAGT
AATCGCTGAAACTGGAGACTCTTGGTTTAACTGTCAGAAGCTCCGCCTCC
CCGAGAATTGTGGATATGAATTTCAGATGCAGTATGGATCCATTGGCCTG
GTCAGTTGGTGCCACCCTAGGATATGCTCAGGCTGCTAAAGATAAGCGTG
TGATTGCTTGCATTGGTGATGGAAGTTTCCAGGTAACTGCTCAGGAGATA
TCAACGATGATTCGATGTGGACAAAGGAGCATCATATTCCTTATCAACAA
TGGCGGGTATACAATTGAAGTAGAGATTCATGATGGGCCTTACAATGTGA
TTAAGAACTGGGATTATACTGGCCTGGTAAATGCCATCCACAATGGAGAA
GGAAAATGCTGGACTGCCAAGGTGCGGAGTGAAGATGAACTAACAGAAGC
AATGAAGACAGCTACTGGAGAACAAAAAGATTCTCTATGTTTTATCGAAG
TATTTGTGCACAAGGATGACACCAGCAAAGAGCTGCTGGAGTGGGGATCC
AGGGTTTCTGCAGCCAACAGCCGCCCTCCAAATCCTCAATAGCACTTTGA
AGTGTTGAGGATTTTGAGTTTCTGTTATTTCAACTGCAGTATTCTTGGCC
TATATCCTAAAA
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