BQ623058

Overview
NameBQ623058
Unique NameBQ623058
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length698
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1234 contig Csv1_Contig1234:742..1439. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of BQ623058 vs. ExPASy Swiss-Prot
Match: METK_ECOLU (S-adenosylmethionine synthetase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=metK PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.146e-50
Identity = 105/216 (48.61%), Postives = 141/216 (65.28%), Query Frame = 2 
Query:    2 PDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 649
            PD K+QVT +Y  D+G +V +    V++STQH E +    +   + E +IKP++P ++L   T F +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT K+P +++  +V+E FD RP  +   LDL    +  + +TAAYGHFGR+   F WE
Sbjct:  163 PDAKSQVTFQY--DDGKIVGI--DAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--HFPWE 369
[Close]
BLAST of BQ623058 vs. ExPASy Swiss-Prot
Match: METK_ECOLI (S-adenosylmethionine synthetase OS=Escherichia coli (strain K12) GN=metK PE=1 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 3.146e-50
Identity = 105/216 (48.61%), Postives = 141/216 (65.28%), Query Frame = 2 
Query:    2 PDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 649
            PD K+QVT +Y  D+G +V +    V++STQH E +    +   + E +IKP++P ++L   T F +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT K+P +++  +V+E FD RP  +   LDL    +  + +TAAYGHFGR+   F WE
Sbjct:  163 PDAKSQVTFQY--DDGKIVGI--DAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--HFPWE 369
[Close]
BLAST of BQ623058 vs. ExPASy Swiss-Prot
Match: METK_ECOLC (S-adenosylmethionine synthetase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=metK PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.146e-50
Identity = 105/216 (48.61%), Postives = 141/216 (65.28%), Query Frame = 2 
Query:    2 PDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 649
            PD K+QVT +Y  D+G +V +    V++STQH E +    +   + E +IKP++P ++L   T F +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT K+P +++  +V+E FD RP  +   LDL    +  + +TAAYGHFGR+   F WE
Sbjct:  163 PDAKSQVTFQY--DDGKIVGI--DAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--HFPWE 369
[Close]
BLAST of BQ623058 vs. ExPASy Swiss-Prot
Match: METK_ECOL6 (S-adenosylmethionine synthetase OS=Escherichia coli O6 GN=metK PE=3 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 3.146e-50
Identity = 105/216 (48.61%), Postives = 141/216 (65.28%), Query Frame = 2 
Query:    2 PDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 649
            PD K+QVT +Y  D+G +V +    V++STQH E +    +   + E +IKP++P ++L   T F +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT K+P +++  +V+E FD RP  +   LDL    +  + +TAAYGHFGR+   F WE
Sbjct:  163 PDAKSQVTFQY--DDGKIVGI--DAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--HFPWE 369
[Close]
BLAST of BQ623058 vs. ExPASy Swiss-Prot
Match: METK_ECOL5 (S-adenosylmethionine synthetase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=metK PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.146e-50
Identity = 105/216 (48.61%), Postives = 141/216 (65.28%), Query Frame = 2 
Query:    2 PDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 649
            PD K+QVT +Y  D+G +V +    V++STQH E +    +   + E +IKP++P ++L   T F +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT K+P +++  +V+E FD RP  +   LDL    +  + +TAAYGHFGR+   F WE
Sbjct:  163 PDAKSQVTFQY--DDGKIVGI--DAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--HFPWE 369
[Close]
BLAST of BQ623058 vs. ExPASy Swiss-Prot
Match: METK_ECOHS (S-adenosylmethionine synthetase OS=Escherichia coli O9:H4 (strain HS) GN=metK PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.146e-50
Identity = 105/216 (48.61%), Postives = 141/216 (65.28%), Query Frame = 2 
Query:    2 PDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 649
            PD K+QVT +Y  D+G +V +    V++STQH E +    +   + E +IKP++P ++L   T F +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT K+P +++  +V+E FD RP  +   LDL    +  + +TAAYGHFGR+   F WE
Sbjct:  163 PDAKSQVTFQY--DDGKIVGI--DAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--HFPWE 369
[Close]
BLAST of BQ623058 vs. ExPASy Swiss-Prot
Match: METK_ECODH (S-adenosylmethionine synthetase OS=Escherichia coli (strain K12 / DH10B) GN=metK PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.146e-50
Identity = 105/216 (48.61%), Postives = 141/216 (65.28%), Query Frame = 2 
Query:    2 PDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 649
            PD K+QVT +Y  D+G +V +    V++STQH E +    +   + E +IKP++P ++L   T F +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT K+P +++  +V+E FD RP  +   LDL    +  + +TAAYGHFGR+   F WE
Sbjct:  163 PDAKSQVTFQY--DDGKIVGI--DAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--HFPWE 369
[Close]
BLAST of BQ623058 vs. ExPASy Swiss-Prot
Match: METK_ECOBW (S-adenosylmethionine synthetase OS=Escherichia coli (strain K12 / BW2952) GN=metK PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.146e-50
Identity = 105/216 (48.61%), Postives = 141/216 (65.28%), Query Frame = 2 
Query:    2 PDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 649
            PD K+QVT +Y  D+G +V +    V++STQH E +    +   + E +IKP++P ++L   T F +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT K+P +++  +V+E FD RP  +   LDL    +  + +TAAYGHFGR+   F WE
Sbjct:  163 PDAKSQVTFQY--DDGKIVGI--DAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--HFPWE 369
[Close]
BLAST of BQ623058 vs. ExPASy Swiss-Prot
Match: METK_ECO8A (S-adenosylmethionine synthetase OS=Escherichia coli O8 (strain IAI1) GN=metK PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.146e-50
Identity = 105/216 (48.61%), Postives = 141/216 (65.28%), Query Frame = 2 
Query:    2 PDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 649
            PD K+QVT +Y  D+G +V +    V++STQH E +    +   + E +IKP++P ++L   T F +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT K+P +++  +V+E FD RP  +   LDL    +  + +TAAYGHFGR+   F WE
Sbjct:  163 PDAKSQVTFQY--DDGKIVGI--DAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--HFPWE 369
[Close]
BLAST of BQ623058 vs. ExPASy Swiss-Prot
Match: METK_ECO7I (S-adenosylmethionine synthetase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=metK PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.146e-50
Identity = 105/216 (48.61%), Postives = 141/216 (65.28%), Query Frame = 2 
Query:    2 PDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 649
            PD K+QVT +Y  D+G +V +    V++STQH E +    +   + E +IKP++P ++L   T F +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT K+P +++  +V+E FD RP  +   LDL    +  + +TAAYGHFGR+   F WE
Sbjct:  163 PDAKSQVTFQY--DDGKIVGI--DAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--HFPWE 369
The following BLAST results are available for this feature:
BLAST of BQ623058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_ECOLU3.146e-5048.61S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECOLI3.146e-5048.61S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECOLC3.146e-5048.61S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECOL63.146e-5048.61S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECOL53.146e-5048.61S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECOHS3.146e-5048.61S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECODH3.146e-5048.61S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECOBW3.146e-5048.61S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECO8A3.146e-5048.61S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECO7I3.146e-5048.61S-adenosylmethionine synthetase OS=Escherichia col... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00149 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00149 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623058 ID=BQ623058; Name=BQ623058; organism=Citrus sinensis; type=EST; length=698bp
GCCCGATGGGAAGACCCAGGTCACTGTTGAGTACTACAATGACAATGGTG
CCATGGTCCCAGTCCGTGTCCACACGGTCCTCATTTCAACCCAGCATGAT
GAGACTGTCACAAATGATGAAATTGCTGCTGACCTTAAGGAGCACGTCAT
TAAGCCTGTCATCCCCGAGAAGTACCTTGATGAGAAGACCATCTTCCACC
TTAATCCATCAGGTCGTTTTGTCATTGGTGGGCCTCATGGTGATGCTGGT
CTCACTGGACGTAAGATCATCATCGACACTTATGGTGGCTGGGGAGCCCA
TGGTGGCGGTGCTTTCTCTGGAAAAGACCCTACTAAGGTGGATAGGAGTG
GTGCATACATTGTTAGGCAGGCTGCTAAGAGCATTGTTGCAAACGGGCTT
GCTCGCAGGTGCATTGTCCAAGTCTCCTATGCCATTGGTGTGCCTGAGCC
ATTGTCTGTTTTTGTGGACTCATATGGAACCGGCAAGATTCCTGACAAGG
AGATCCTCAAAATTGTGAAGGAAAGCTTTGATTTCAGGCCAGGAATGATG
ACCATCAATTTGGATCTCAAAAGGGGCGGTAATGGCAGGTTCTTGAAGAC
TGCTGCCTATGGACACTTTGGCAGGGATGACCCAGACTTCACTTGGGAAG
TTGTGAAGCCCCTCAAGTGGGAAAAGCCTCAAGCTTAAATTTGAGGTG
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