BQ623067

Overview
NameBQ623067
Unique NameBQ623067
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length476
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of BQ623067 vs. ExPASy Swiss-Prot
Match: ADH6_PERMA (Alcohol dehydrogenase 6 OS=Peromyscus maniculatus GN=ADH6 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 6.066e-14
Identity = 41/125 (32.80%), Postives = 66/125 (52.80%), Query Frame = 1 
Query:   28 KNLR*VIKEMTDGGADYCFECIGLASVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTFFGGLKPKSDIATLAQKYLDKELNLDEFITHEVSFHDINKAFDLLLEGKSLRCVI 402
            K ++ V+ +M + GAD+ FE  G    +  A  S  +  G  VI+G       +++NS     GR++ G+  GG K K +I  L   Y  K+ NLD  ITH ++   +N+A  L+  G+ +RCV+
Sbjct:  249 KPIQQVLFDMMNDGADFTFEVTGNPETVETALASCHKDHGVCVIVGSLASWIQLNINSHLFFSGRTLKGSVLGGWKTKEEIPKLVSDYTAKKFNLDPLITHTLTLDKVNEAIQLMKNGQCIRCVL 373
The following BLAST results are available for this feature:
BLAST of BQ623067 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
ADH6_PERMA6.066e-1432.80Alcohol dehydrogenase 6 OS=Peromyscus maniculatus ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00158 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00158 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623067 ID=BQ623067; Name=BQ623067; organism=Citrus sinensis; type=EST; length=476bp
AGATTATAGGTGTTGATATAAATCCTGAAAAATTTGAGATAGGTGATAAA
GGAAATGACAGATGGGGGAGCAGACTATTGCTTCGAGTGCATTGGCTTGG
CGTCCGTAATGAATGATGCTTTCAACAGTAGCCGAGAGGGCTGGGGCAAG
ACGGTGATACTAGGAGTGGAGATGCATGGCTCCCCAATTTCTTTGAATTC
CATCGAGATTCTCAAAGGCAGAAGCGTTTGTGGCACATTTTTCGGAGGGC
TGAAACCCAAATCTGACATTGCTACTCTCGCCCAGAAGTACCTAGACAAG
GAGCTTAATCTGGACGAGTTCATAACACACGAAGTGAGCTTCCACGATAT
TAACAAAGCTTTCGACTTGCTCCTCGAAGGAAAAAGTCTGCGTTGCGTCA
TCTGGATGGATAAATTGATATAGGACAGCAAGTATTCTTCTTATATGGTA
CACTTTATTGAAATAATCAAGTTTGG
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