BQ623067

Overview
NameBQ623067
Unique NameBQ623067
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length476
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623067 vs. ExPASy Swiss-Prot
Match: ADHX_DICDI (Alcohol dehydrogenase class-3 OS=Dictyostelium discoideum GN=adh5 PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 2.222e-24
Identity = 52/125 (41.60%), Postives = 81/125 (64.80%), Query Frame = 1
Query:   28 KNLR*VIKEMTDGGADYCFECIGLASVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTFFGGLKPKSDIATLAQKYLDKELNLDEFITHEVSFHDINKAFDLLLEGKSLRCVI 402
            K ++  + ++TDGG DY FECIG  +VM  A     +GWG + I+GV   G+ IS    +++ GR   G+ FGG+K +S + ++  KY+DK+L +DE++T     ++IN AFD++ EGKSLR V+
Sbjct:  253 KTIQQHLVDITDGGVDYSFECIGNVNVMRAALECCHKGWGVSTIVGVAPAGAEISTRPFQLVTGRVWKGSAFGGVKSRSQLPSIIDKYMDKKLKVDEYVTFTYPLNEINTAFDVMHEGKSLRSVV 377          
BLAST of BQ623067 vs. ExPASy Swiss-Prot
Match: ADH1_ORYSJ (Alcohol dehydrogenase 1 OS=Oryza sativa subsp. japonica GN=ADH1 PE=2 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 3.790e-24
Identity = 51/128 (39.84%), Postives = 80/128 (62.50%), Query Frame = 1
Query:   28 KNLR*VIKEMTDGGADYCFECIGLASVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTFFGGLKPKSDIATLAQKYLDKELNLDEFITHEVSFHDINKAFDLLLEGKSLRCVIWMD 411
            K ++ V+ EMT+GG D   EC G  + M  AF    +GWG  V++GV    +    + +  L  R++ GTFFG  KP++D+  + + Y+ KEL +++FITH V F +IN AFDL+ +G+ +RC+I M+
Sbjct:  251 KPVQQVLAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFLNERTLKGTFFGNYKPRTDLPNVVELYMKKELEVEKFITHSVPFSEINTAFDLMHKGEGIRCIIRME 378          
BLAST of BQ623067 vs. ExPASy Swiss-Prot
Match: ADH1_ORYSI (Alcohol dehydrogenase 1 OS=Oryza sativa subsp. indica GN=ADH1 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 3.790e-24
Identity = 51/128 (39.84%), Postives = 80/128 (62.50%), Query Frame = 1
Query:   28 KNLR*VIKEMTDGGADYCFECIGLASVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTFFGGLKPKSDIATLAQKYLDKELNLDEFITHEVSFHDINKAFDLLLEGKSLRCVIWMD 411
            K ++ V+ EMT+GG D   EC G  + M  AF    +GWG  V++GV    +    + +  L  R++ GTFFG  KP++D+  + + Y+ KEL +++FITH V F +IN AFDL+ +G+ +RC+I M+
Sbjct:  251 KPVQQVLAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFLNERTLKGTFFGNYKPRTDLPNVVELYMKKELEVEKFITHSVPFSEINTAFDLMHKGEGIRCIIRME 378          
BLAST of BQ623067 vs. ExPASy Swiss-Prot
Match: ADH3_HORVU (Alcohol dehydrogenase 3 OS=Hordeum vulgare GN=ADH3 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 5.158e-24
Identity = 51/129 (39.53%), Postives = 78/129 (60.47%), Query Frame = 1
Query:   28 KNLR*VIKEMTDGGADYCFECIGLASVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTFFGGLKPKSDIATLAQKYLDKELNLDEFITHEVSFHDINKAFDLLLEGKSLRCVIWMDK 414
            K ++ V+ EMT+GG D   EC G    M   F    +GWG  V++GV    +    + +  L  +++ GTFFG  KP++D+  + + Y+ KEL+L++FITH V F  IN AFDL+L+G+ LRC+   D+
Sbjct:  251 KPVQEVLVEMTNGGVDRAVECTGHIDAMIATFECVHDGWGVAVLVGVPHKEAVFKTHPMNFLNEKTLKGTFFGNYKPRTDLPEVVEMYMRKELDLEKFITHSVPFSQINTAFDLMLKGEGLRCITRTDQ 379          

HSP 2 Score: 24.6386 bits (52), Expect = 5.158e-24
Identity = 10/16 (62.50%), Postives = 12/16 (75.00%), Query Frame = 3
Query:    3 IIGVDINPEKFEIGDK 50
            IIGVD+NP K+E   K
Sbjct:  222 IIGVDLNPAKYEQAKK 237          
BLAST of BQ623067 vs. ExPASy Swiss-Prot
Match: ADHX_MYXGL (Alcohol dehydrogenase class-3 OS=Myxine glutinosa PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.440e-23
Identity = 52/120 (43.33%), Postives = 73/120 (60.83%), Query Frame = 1
Query:   43 VIKEMTDGGADYCFECIGLASVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTFFGGLKPKSDIATLAQKYLDKELNLDEFITHEVSFHDINKAFDLLLEGKSLRCVI 402
            V+ EMTDGG DY FEC+G   +M  A  S  +GWG +VILGV   G  IS    +++ GR+  G  FGG K    +  L   Y+  ++ +DEF++H + F  IN+AFDL+  GKS+R V+
Sbjct:  255 VLGEMTDGGLDYTFECVGNVGIMRAALESCHKGWGVSVILGVAGGGQEISTRPFQLVTGRTWKGAAFGGWKSVESVPKLVDDYMAGKIMVDEFVSHSLPFDSINEAFDLMHAGKSIRTVL 374          
BLAST of BQ623067 vs. ExPASy Swiss-Prot
Match: FADH1_SCHPO (Probable S-(hydroxymethyl)glutathione dehydrogenase 1 OS=Schizosaccharomyces pombe GN=SPBC1539.07c PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 2.457e-23
Identity = 49/130 (37.69%), Postives = 77/130 (59.23%), Query Frame = 1
Query:   25 LKNLR*VIKEMTDGGADYCFECIGLASVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTFFGGLKPKSDIATLAQKYLDKELNLDEFITHEVSFHDINKAFDLLLEGKSLRCVIWMDK 414
            +K+L   + ++TDGG DY F+C G  +VM        +GWGK  ++GV   G  +      ++ GR V G+ FGG+K +S++     +Y+     +DE+IT+E    +INKAFD + EGK +RCV+ M+K
Sbjct:  248 VKDLVQYVIDVTDGGVDYAFDCTGNVTVMQQELQFCHKGWGKLCVIGVAAAGKTLDFRPFLVVTGRQVLGSAFGGVKGRSELPNFVDEYMQGHFKVDEYITNEEPLKNINKAFDHMHEGKCIRCVVDMNK 377          
BLAST of BQ623067 vs. ExPASy Swiss-Prot
Match: FRMA_SYNY3 (S-(hydroxymethyl)glutathione dehydrogenase OS=Synechocystis sp. (strain PCC 6803) GN=frmA PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 4.242e-23
Identity = 52/120 (43.33%), Postives = 74/120 (61.67%), Query Frame = 1
Query:   43 VIKEMTDGGADYCFECIGLASVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTFFGGLKPKSDIATLAQKYLDKELNLDEFITHEVSFHDINKAFDLLLEGKSLRCVI 402
            VI EMT  G D+ FECIG   VM  A   +  GWG++VI+GV   G  IS    +++ GR   GT FGG+K +S +  + ++ +  E+ L  F+TH +   DIN+AFDL+ +GKS+R VI
Sbjct:  248 VIVEMTGWGVDHSFECIGNVEVMRSALECAHRGWGQSVIIGVAGAGQEISTRPFQLVTGRKWMGTAFGGVKGRSQLPGMVEQSMRGEIQLAPFVTHTMELKDINQAFDLMHDGKSIRSVI 367          

HSP 2 Score: 22.3274 bits (46), Expect = 4.242e-23
Identity = 8/13 (61.54%), Postives = 10/13 (76.92%), Query Frame = 3
Query:    3 IIGVDINPEKFEI 41
            II +D NP KFE+
Sbjct:  214 IIAIDTNPAKFEL 226          
BLAST of BQ623067 vs. ExPASy Swiss-Prot
Match: ADHX_CAEEL (Alcohol dehydrogenase class-3 OS=Caenorhabditis elegans GN=H24K24.3 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 7.148e-23
Identity = 52/122 (42.62%), Postives = 74/122 (60.66%), Query Frame = 1
Query:   52 EMTDGGADYCFECIGLASVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTFFGGLKPKSDIATLAQKYLDKELNLDEFITHEVSFHDINKAFDLLLEGKSLRCVIWMDKL 417
            E  DGG DY FECIG    M  A  ++ +GWG + I+GV   G  I+    +++ GR+  GT FGG K    +  L   Y++K+L +DEFITH  +  DIN AFD+L +G+SLR V+  +K+
Sbjct:  263 EQFDGGFDYTFECIGNVHTMRQALEAAHKGWGVSCIIGVAGAGQEIATRPFQLVTGRTWKGTAFGGWKSVESVPRLVDDYMNKKLLIDEFITHRWNIDDINTAFDVLHKGESLRSVLAFEKI 384          
BLAST of BQ623067 vs. ExPASy Swiss-Prot
Match: ADH1_RANPE (Alcohol dehydrogenase 1 OS=Rana perezi PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 7.148e-23
Identity = 53/120 (44.17%), Postives = 75/120 (62.50%), Query Frame = 1
Query:   43 VIKEMTDGGADYCFECIGLASVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTFFGGLKPKSDIATLAQKYLDKELNLDEFITHEVSFHDINKAFDLLLEGKSLRCVI 402
            V+ +MTD G DY FE IG  +VM  A +SS  G GKTVI+G+    + +S + + IL GR + G  FGG K K D+  L + YL+K+ + D  ITH + F  IN+ F+LL  GKS+R ++
Sbjct:  254 VLAKMTDDGVDYAFEVIGNTTVMTSALSSSHFGCGKTVIVGLAPSSAVMSFDPLLILTGRILTGAVFGGWKSKDDVPKLVRDYLNKKFDFDPLITHYMPFEKINEGFELLRNGKSIRTIL 373          
BLAST of BQ623067 vs. ExPASy Swiss-Prot
Match: FADH_PARDE (S-(hydroxymethyl)glutathione dehydrogenase OS=Paracoccus denitrificans GN=flhA PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.219e-22
Identity = 51/134 (38.06%), Postives = 79/134 (58.96%), Query Frame = 1
Query:   28 KNLR*VIKEMTD---------GGADYCFECIGLASVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTFFGGLKPKSDIATLAQKYLDKELNLDEFITHEVSFHDINKAFDLLLEGKSLRCVI 402
            KN   V++E+ +         GGADY F+C G   VM DA   +  GWG+++I+GV   G+ IS    +++ GR   GT FGG + ++D+  +   Y+D ++ +D  ITH +S  DINK FDL+  G+S+R V+
Sbjct:  240 KNCENVVQEIVNLTKTPFDQIGGADYSFDCTGNVKVMRDALECTHRGWGQSIIIGVAPAGAEISTRPFQLVTGRVWKGTAFGGARGRTDVPQIVDWYMDGKIEIDPMITHTLSLDDINKGFDLMHAGESIRSVV 373          
The following BLAST results are available for this feature:
BLAST of BQ623067 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
ADHX_DICDI2.222e-2441.60Alcohol dehydrogenase class-3 OS=Dictyostelium dis... [more]
ADH1_ORYSJ3.790e-2439.84Alcohol dehydrogenase 1 OS=Oryza sativa subsp. jap... [more]
ADH1_ORYSI3.790e-2439.84Alcohol dehydrogenase 1 OS=Oryza sativa subsp. ind... [more]
ADH3_HORVU5.158e-2439.53Alcohol dehydrogenase 3 OS=Hordeum vulgare GN=ADH3... [more]
ADHX_MYXGL1.440e-2343.33Alcohol dehydrogenase class-3 OS=Myxine glutinosa ... [more]
FADH1_SCHPO2.457e-2337.69Probable S-(hydroxymethyl)glutathione dehydrogenas... [more]
FRMA_SYNY34.242e-2343.33S-(hydroxymethyl)glutathione dehydrogenase OS=Syne... [more]
ADHX_CAEEL7.148e-2342.62Alcohol dehydrogenase class-3 OS=Caenorhabditis el... [more]
ADH1_RANPE7.148e-2344.17Alcohol dehydrogenase 1 OS=Rana perezi PE=1 SV=1[more]
FADH_PARDE1.219e-2238.06S-(hydroxymethyl)glutathione dehydrogenase OS=Para... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00158 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00158 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623067 ID=BQ623067; Name=BQ623067; organism=Citrus sinensis; type=EST; length=476bp
AGATTATAGGTGTTGATATAAATCCTGAAAAATTTGAGATAGGTGATAAA
GGAAATGACAGATGGGGGAGCAGACTATTGCTTCGAGTGCATTGGCTTGG
CGTCCGTAATGAATGATGCTTTCAACAGTAGCCGAGAGGGCTGGGGCAAG
ACGGTGATACTAGGAGTGGAGATGCATGGCTCCCCAATTTCTTTGAATTC
CATCGAGATTCTCAAAGGCAGAAGCGTTTGTGGCACATTTTTCGGAGGGC
TGAAACCCAAATCTGACATTGCTACTCTCGCCCAGAAGTACCTAGACAAG
GAGCTTAATCTGGACGAGTTCATAACACACGAAGTGAGCTTCCACGATAT
TAACAAAGCTTTCGACTTGCTCCTCGAAGGAAAAAGTCTGCGTTGCGTCA
TCTGGATGGATAAATTGATATAGGACAGCAAGTATTCTTCTTATATGGTA
CACTTTATTGAAATAATCAAGTTTGG
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