BQ623067

Overview
NameBQ623067
Unique NameBQ623067
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length476
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of BQ623067 vs. ExPASy Swiss-Prot
Match: ADH1_PERMA (Alcohol dehydrogenase 1 OS=Peromyscus maniculatus GN=ADH1 PE=2 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 1.141e-20
Identity = 51/125 (40.80%), Postives = 73/125 (58.40%), Query Frame = 1
Query:   28 KNLR*VIKEMTDGGADYCFECIGLASVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTFFGGLKPKSDIATLAQKYLDKELNLDEFITHEVSFHDINKAFDLLLEGKSLRCVI 402
            K ++ V++EMTDGG D+ FE IG    M  +  S     G +VI+GV  +   +S+N + +L GRS  G  FGG K K  +  L   ++ K+  L+  ITH + F  IN+AFDLL  GKS+R V+
Sbjct:  249 KPIQEVLQEMTDGGVDFSFEVIGRLDTMTSSLLSCHASCGVSVIVGVPPNAQSLSVNPMSLLMGRSWKGAIFGGFKSKDSVPKLVTDFMAKKFPLEPLITHVLPFEKINEAFDLLRAGKSIRTVL 373          
BLAST of BQ623067 vs. ExPASy Swiss-Prot
Match: ADH1_MOUSE (Alcohol dehydrogenase 1 OS=Mus musculus GN=Adh1 PE=2 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 1.141e-20
Identity = 51/125 (40.80%), Postives = 73/125 (58.40%), Query Frame = 1
Query:   28 KNLR*VIKEMTDGGADYCFECIGLASVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTFFGGLKPKSDIATLAQKYLDKELNLDEFITHEVSFHDINKAFDLLLEGKSLRCVI 402
            K ++ V++EMTDGG D+ FE IG    M  A  S     G +V++GV  +   +S+N + +L GR+  G  FGG K K  +  L   ++ K+  LD  ITH + F  IN+AFDLL  GKS+R V+
Sbjct:  249 KPIQEVLQEMTDGGVDFSFEVIGRLDTMTSALLSCHAACGVSVVVGVPPNAQNLSMNPMLLLLGRTWKGAIFGGFKSKDSVPKLVADFMAKKFPLDPLITHVLPFEKINEAFDLLRSGKSIRTVL 373          
BLAST of BQ623067 vs. ExPASy Swiss-Prot
Match: ADH1A_MACMU (Alcohol dehydrogenase 1A OS=Macaca mulatta GN=ADH1A PE=2 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 1.141e-20
Identity = 51/125 (40.80%), Postives = 73/125 (58.40%), Query Frame = 1
Query:   28 KNLR*VIKEMTDGGADYCFECIGLASVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTFFGGLKPKSDIATLAQKYLDKELNLDEFITHEVSFHDINKAFDLLLEGKSLRCVI 402
            K ++ V+KEMTDGG D+ FE IG    M  +     E  G +VI+GV      +S+N + +L GR+  G  +GG K K DI  L   ++ K+ +LD  ITH + F  IN+ FDLL  GKS+R ++
Sbjct:  249 KPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPDSQNLSINPMLLLTGRTWKGAVYGGFKSKEDIPKLVADFMAKKFSLDALITHVLPFEKINEGFDLLRSGKSIRTIL 373          
BLAST of BQ623067 vs. ExPASy Swiss-Prot
Match: ADH1_ALLMI (Alcohol dehydrogenase 1 OS=Alligator mississippiensis PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.385e-20
Identity = 50/125 (40.00%), Postives = 73/125 (58.40%), Query Frame = 1
Query:   28 KNLR*VIKEMTDGGADYCFECIGLASVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTFFGGLKPKSDIATLAQKYLDKELNLDEFITHEVSFHDINKAFDLLLEGKSLRCVI 402
            K ++ V+ EMT GG DY FE IG    M  A    ++ +G +VI+GV      I+ N + +  GR+  G+ FGG K K  +  L   Y++K++NLD  ITH + F  IN+ F+LL  GKS+R V+
Sbjct:  248 KPIQEVLSEMTGGGVDYSFEVIGRIDTMTAALACCQDNYGTSVIVGVPPASEKITFNPMMLFTGRTWKGSVFGGWKSKESVPKLVADYMEKKINLDGLITHTLPFDKINEGFELLRTGKSIRSVL 372          

HSP 2 Score: 21.9422 bits (45), Expect = 1.385e-20
Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 3
Query:    3 IIGVDINPEKF 35
            IIG+DIN +KF
Sbjct:  219 IIGIDINKDKF 229          
BLAST of BQ623067 vs. ExPASy Swiss-Prot
Match: ADH4_HUMAN (Alcohol dehydrogenase 4 OS=Homo sapiens GN=ADH4 PE=1 SV=4)

HSP 1 Score: 96.6709 bits (239), Expect = 2.342e-20
Identity = 46/125 (36.80%), Postives = 73/125 (58.40%), Query Frame = 1
Query:   28 KNLR*VIKEMTDGGADYCFECIGLASVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTFFGGLKPKSDIATLAQKYLDKELNLDEFITHEVSFHDINKAFDLLLEGKSLRCVI 402
            K ++ VI E+T GG D+  +C G +  M  A + +  GWG    +GV      +++   E++ GR++ GTFFGG K    I  L   Y +K+ NLD  +TH + F  I++AFDL+ +GKS+R ++
Sbjct:  254 KPIQEVIIELTKGGVDFALDCAGGSETMKAALDCTTAGWGSCTFIGVAAGSKGLTVFPEELIIGRTINGTFFGGWKSVDSIPKLVTDYKNKKFNLDALVTHTLPFDKISEAFDLMNQGKSIRTIL 378          

HSP 2 Score: 23.0978 bits (48), Expect = 2.342e-20
Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = 3
Query:    3 IIGVDINPEKF 35
            IIG+DIN EKF
Sbjct:  225 IIGIDINSEKF 235          
BLAST of BQ623067 vs. ExPASy Swiss-Prot
Match: ADH1_RAT (Alcohol dehydrogenase 1 OS=Rattus norvegicus GN=Adh1 PE=1 SV=3)

HSP 1 Score: 97.4413 bits (241), Expect = 3.321e-20
Identity = 51/125 (40.80%), Postives = 72/125 (57.60%), Query Frame = 1
Query:   28 KNLR*VIKEMTDGGADYCFECIGLASVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTFFGGLKPKSDIATLAQKYLDKELNLDEFITHEVSFHDINKAFDLLLEGKSLRCVI 402
            K ++ V++EMTDGG D+ FE IG    M  A  S     G +VI+GV      +S+N + +L GR+  G  FGG K K  +  L   ++ K+  L+  ITH + F  IN+AFDLL  GKS+R V+
Sbjct:  250 KPIQEVLQEMTDGGVDFSFEVIGRLDTMTSALLSCHSACGVSVIVGVPPSAQSLSVNPMSLLLGRTWKGAIFGGFKSKDAVPKLVADFMAKKFPLEPLITHVLPFEKINEAFDLLRAGKSIRTVL 374          
BLAST of BQ623067 vs. ExPASy Swiss-Prot
Match: ADH4_MOUSE (Alcohol dehydrogenase 4 OS=Mus musculus GN=Adh4 PE=1 SV=3)

HSP 1 Score: 97.0561 bits (240), Expect = 4.337e-20
Identity = 45/125 (36.00%), Postives = 75/125 (60.00%), Query Frame = 1
Query:   28 KNLR*VIKEMTDGGADYCFECIGLASVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTFFGGLKPKSDIATLAQKYLDKELNLDEFITHEVSFHDINKAFDLLLEGKSLRCVI 402
            K ++ VI E+T GG DY  +C G A  +  A + +  GWG   ++G ++    +++ +++++ GRS+ GTFFGG K    +  L   Y +K+ +LD  +TH + F  IN A DL+ EGKS+R ++
Sbjct:  253 KPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKV--DEMTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGKSIRTIL 375          
BLAST of BQ623067 vs. ExPASy Swiss-Prot
Match: ADHI_RHOS4 (Alcohol dehydrogenase class-3 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=adhI PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 9.661e-20
Identity = 41/113 (36.28%), Postives = 69/113 (61.06%), Query Frame = 1
Query:   64 GGADYCFECIGLASVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTFFGGLKPKSDIATLAQKYLDKELNLDEFITHEVSFHDINKAFDLLLEGKSLRCVI 402
            GGADY F+C G   VM  A  +   GWG+++++GV   G+ I     +++ GR   G+ FGG + ++D+  +   Y++ ++ +D  ITH +S  +INK FDL+  G+S+R V+
Sbjct:  262 GGADYTFDCTGNVKVMRQALEACHRGWGQSIVIGVAPAGAEIQTRPFQLVTGRVWKGSAFGGARGRTDVPKIVDWYMEGKIQIDPMITHILSLEEINKGFDLMHAGESIRSVV 374          
BLAST of BQ623067 vs. ExPASy Swiss-Prot
Match: ADH1B_PANTR (Alcohol dehydrogenase 1B OS=Pan troglodytes GN=ADH1B PE=2 SV=3)

HSP 1 Score: 95.9005 bits (237), Expect = 9.661e-20
Identity = 51/125 (40.80%), Postives = 72/125 (57.60%), Query Frame = 1
Query:   28 KNLR*VIKEMTDGGADYCFECIGLASVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTFFGGLKPKSDIATLAQKYLDKELNLDEFITHEVSFHDINKAFDLLLEGKSLRCVI 402
            K ++ V+KEMTDGG D+ FE IG    M  +     E  G +VI+GV      +S+N + +L GR+  G  +GG K K  I  L   ++ K+ +LD  ITH + F  IN+ FDLL  GKS+R V+
Sbjct:  249 KPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKINEGFDLLHSGKSIRTVL 373          
BLAST of BQ623067 vs. ExPASy Swiss-Prot
Match: ADH1B_HUMAN (Alcohol dehydrogenase 1B OS=Homo sapiens GN=ADH1B PE=1 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 9.661e-20
Identity = 51/125 (40.80%), Postives = 72/125 (57.60%), Query Frame = 1
Query:   28 KNLR*VIKEMTDGGADYCFECIGLASVMNDAFNSSREGWGKTVILGVEMHGSPISLNSIEILKGRSVCGTFFGGLKPKSDIATLAQKYLDKELNLDEFITHEVSFHDINKAFDLLLEGKSLRCVI 402
            K ++ V+KEMTDGG D+ FE IG    M  +     E  G +VI+GV      +S+N + +L GR+  G  +GG K K  I  L   ++ K+ +LD  ITH + F  IN+ FDLL  GKS+R V+
Sbjct:  249 KPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAKKFSLDALITHVLPFEKINEGFDLLHSGKSIRTVL 373          
The following BLAST results are available for this feature:
BLAST of BQ623067 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
ADH1_PERMA1.141e-2040.80Alcohol dehydrogenase 1 OS=Peromyscus maniculatus ... [more]
ADH1_MOUSE1.141e-2040.80Alcohol dehydrogenase 1 OS=Mus musculus GN=Adh1 PE... [more]
ADH1A_MACMU1.141e-2040.80Alcohol dehydrogenase 1A OS=Macaca mulatta GN=ADH1... [more]
ADH1_ALLMI1.385e-2040.00Alcohol dehydrogenase 1 OS=Alligator mississippien... [more]
ADH4_HUMAN2.342e-2036.80Alcohol dehydrogenase 4 OS=Homo sapiens GN=ADH4 PE... [more]
ADH1_RAT3.321e-2040.80Alcohol dehydrogenase 1 OS=Rattus norvegicus GN=Ad... [more]
ADH4_MOUSE4.337e-2036.00Alcohol dehydrogenase 4 OS=Mus musculus GN=Adh4 PE... [more]
ADHI_RHOS49.661e-2036.28Alcohol dehydrogenase class-3 OS=Rhodobacter sphae... [more]
ADH1B_PANTR9.661e-2040.80Alcohol dehydrogenase 1B OS=Pan troglodytes GN=ADH... [more]
ADH1B_HUMAN9.661e-2040.80Alcohol dehydrogenase 1B OS=Homo sapiens GN=ADH1B ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00158 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00158 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623067 ID=BQ623067; Name=BQ623067; organism=Citrus sinensis; type=EST; length=476bp
AGATTATAGGTGTTGATATAAATCCTGAAAAATTTGAGATAGGTGATAAA
GGAAATGACAGATGGGGGAGCAGACTATTGCTTCGAGTGCATTGGCTTGG
CGTCCGTAATGAATGATGCTTTCAACAGTAGCCGAGAGGGCTGGGGCAAG
ACGGTGATACTAGGAGTGGAGATGCATGGCTCCCCAATTTCTTTGAATTC
CATCGAGATTCTCAAAGGCAGAAGCGTTTGTGGCACATTTTTCGGAGGGC
TGAAACCCAAATCTGACATTGCTACTCTCGCCCAGAAGTACCTAGACAAG
GAGCTTAATCTGGACGAGTTCATAACACACGAAGTGAGCTTCCACGATAT
TAACAAAGCTTTCGACTTGCTCCTCGAAGGAAAAAGTCTGCGTTGCGTCA
TCTGGATGGATAAATTGATATAGGACAGCAAGTATTCTTCTTATATGGTA
CACTTTATTGAAATAATCAAGTTTGG
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