BQ623071

Overview
NameBQ623071
Unique NameBQ623071
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length699
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1899 contig Csv1_Contig1899:501..1199. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of BQ623071 vs. ExPASy Swiss-Prot
Match: LGUL_NEIMB (Lactoylglutathione lyase OS=Neisseria meningitidis serogroup B GN=gloA PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.064e-21
Identity = 53/129 (41.09%), Postives = 75/129 (58.14%), Query Frame = 1
Query:   73 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYAVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTEELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE 459
            L   MLRVG+L +S+ FY+  LGMKLLR  D PE +  LA +GY +E  +TVLEL +++    Y  GNAY  +A+  DD Y++ E V    +  GG + R+ GP+    T I    DPDG+K   +  +
Sbjct:    3 LLHTMLRVGNLEKSLDFYQNVLGMKLLRRKDYPEGRFTLAFVGYGDETDSTVLELTHNWDTERYDLGNAYGHIAVEVDDAYEACERV----KRQGGNVVREAGPMKHGTTVIAFVEDPDGYKIEFIQKK 127          
BLAST of BQ623071 vs. ExPASy Swiss-Prot
Match: LGUL_NEIMA (Lactoylglutathione lyase OS=Neisseria meningitidis serogroup A GN=gloA PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.064e-21
Identity = 53/129 (41.09%), Postives = 75/129 (58.14%), Query Frame = 1
Query:   73 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYAVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTEELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLVDNE 459
            L   MLRVG+L +S+ FY+  LGMKLLR  D PE +  LA +GY +E  +TVLEL +++    Y  GNAY  +A+  DD Y++ E V    +  GG + R+ GP+    T I    DPDG+K   +  +
Sbjct:    3 LLHTMLRVGNLEKSLDFYQNVLGMKLLRRKDYPEGRFTLAFVGYGDETDSTVLELTHNWDTERYDLGNAYGHIAVEVDDAYEACERV----KRQGGNVVREAGPMKHGTTVIAFVEDPDGYKIEFIQKK 127          
BLAST of BQ623071 vs. ExPASy Swiss-Prot
Match: LGUL_SYNY3 (Probable lactoylglutathione lyase OS=Synechocystis sp. (strain PCC 6803) GN=gloA PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.421e-20
Identity = 47/126 (37.30%), Postives = 74/126 (58.73%), Query Frame = 1
Query:   73 LCQVMLRVGDLGRSIKFYEKALGMKLLRTIDSPELKCALAMLGYAEEDQTTVLELAYSYAVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTEELGGKITRQPGPIPGLNTKITSFVDPDGWKTVLV 450
            L   M+RVGDL +S++FY   LGM LLR  D P  +  LA +GY +E +  V+EL +++   +Y  GN +  +A+  +D+Y + + +     + GGK+ R+PGP+    T I    DPDG+K  L+
Sbjct:    3 LLHTMIRVGDLDKSLQFYCDILGMNLLRKKDYPSGEFTLAFVGYGKESENAVIELTHNWGTDKYDLGNGFGHIALGVEDIYSTCDKI----RDKGGKVVREPGPMKHGTTVIAFVEDPDGYKIELI 124          
The following BLAST results are available for this feature:
BLAST of BQ623071 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
LGUL_NEIMB1.064e-2141.09Lactoylglutathione lyase OS=Neisseria meningitidis... [more]
LGUL_NEIMA1.064e-2141.09Lactoylglutathione lyase OS=Neisseria meningitidis... [more]
LGUL_SYNY33.421e-2037.30Probable lactoylglutathione lyase OS=Synechocystis... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_00162 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone USDA-FP_00162 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>BQ623071 ID=BQ623071; Name=BQ623071; organism=Citrus sinensis; type=EST; length=699bp
CACTTTGCCTTTGTGAAGGATCCCGATGGTTATATTTTTGAACTCATCCA
GAGAGGTCCAACTCCTGAACCACTCTGTCAAGTAATGCTTCGCGTTGGCG
ATCTTGGTCGCTCCATCAAGTTCTATGAAAAGGCTTTGGGGATGAAACTG
TTAAGGACAATTGATAGTCCTGAATTGAAGTGCGCCCTGGCCATGCTTGG
ATATGCTGAGGAAGATCAGACTACTGTTCTGGAGTTAGCTTATAGTTATG
CTGTGACTGAATATACCAAGGGAAATGCATATGCTCAGGTTGCTATTAGT
ACTGATGATGTATACAAAAGTGCTGAGGTTGTCAACCTGGTTACCGAAGA
GCTTGGAGGGAAGATAACTCGACAACCCGGACCAATCCCTGGACTCAACA
CCAAAATCACCTCTTTCGTAGACCCAGATGGCTGGAAAACGGTCCTGGTT
GACAATGAAGATTTTCTGAAGGAATTGCAGTCGGAGTAACGATGTCATGG
TAGGAGGAGTTTTGCAAAACACCTCTGGTGCATAAAATTAAATCCTACTA
CTGGACTGGACTATCTGGATGAATAAATTACTGGGTCTAGTATTGAAGCC
ACCGATATGCCTGTTACGATATCGGGGGTTTGCTGCTATGTGACCAATTA
TTAATTTGAGATCTACTGCTTAAATTTGGATAACAAAAAAAAAAAAAAA
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